RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 U2AF1L5P0DN76 240 aaPredicted RBP21.86■■□□□ 1.09
CDC42EP1-202ENST00000415670 U2AF1Q01081 240 aaKnown RBP eCLIP21.86■■□□□ 1.09
CDC42EP1-202ENST00000415670 NUTM1Q86Y26 1132 aa21.86■■□□□ 1.09
CDC42EP1-202ENST00000415670 MIS18AQ9NYP9 233 aa21.86■■□□□ 1.09
CDC42EP1-202ENST00000415670 PRKAR2BP31323 418 aa21.85■■□□□ 1.09
CDC42EP1-202ENST00000415670 CST9Q5W186 159 aa21.85■■□□□ 1.09
CDC42EP1-202ENST00000415670 CYP4F22Q6NT55 531 aa21.85■■□□□ 1.09
CDC42EP1-202ENST00000415670 CLEC4GQ6UXB4 293 aa21.85■■□□□ 1.09
CDC42EP1-202ENST00000415670 NGEFQ8N5V2 710 aa21.85■■□□□ 1.09
CDC42EP1-202ENST00000415670 DDX21Q9NR30 783 aaKnown RBP eCLIP21.85■■□□□ 1.09
CDC42EP1-202ENST00000415670 SNED1Q8TER0 1413 aa21.85■■□□□ 1.09
CDC42EP1-202ENST00000415670 TCERG1O14776 1098 aaKnown RBP21.84■■□□□ 1.09
CDC42EP1-202ENST00000415670 TPTE2Q6XPS3 522 aa21.84■■□□□ 1.09
CDC42EP1-202ENST00000415670 RTKN2Q8IZC4 609 aa21.84■■□□□ 1.09
CDC42EP1-202ENST00000415670 ABCC12Q96J65 1359 aa21.84■■□□□ 1.09
CDC42EP1-202ENST00000415670 CCDC85CA6NKD9 419 aa21.83■■□□□ 1.09
CDC42EP1-202ENST00000415670 RSPH6AQ9H0K4 717 aa21.83■■□□□ 1.09
CDC42EP1-202ENST00000415670 AOC2O75106 756 aa21.82■■□□□ 1.08
CDC42EP1-202ENST00000415670 PAXIP1Q6ZW49 1069 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP1-202ENST00000415670 PNMA8AQ86V59 439 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP1-202ENST00000415670 GPC2Q8N158 579 aa21.82■■□□□ 1.08
CDC42EP1-202ENST00000415670 SNRPA1P09661 255 aaKnown RBP21.81■■□□□ 1.08
CDC42EP1-202ENST00000415670 SCNN1DP51172 638 aa21.81■■□□□ 1.08
CDC42EP1-202ENST00000415670 C3orf67Q6ZVT6 689 aa21.81■■□□□ 1.08
CDC42EP1-202ENST00000415670 CAPNS2Q96L46 248 aa21.81■■□□□ 1.08
CDC42EP1-202ENST00000415670 MAP2K1Q02750 393 aaPredicted RBP21.79■■□□□ 1.08
CDC42EP1-202ENST00000415670 PNNQ9H307 717 aaKnown RBP21.79■■□□□ 1.08
CDC42EP1-202ENST00000415670 ZNF652Q9Y2D9 606 aa21.79■■□□□ 1.08
CDC42EP1-202ENST00000415670 GPR101Q96P66 508 aaPredicted RBP21.78■■□□□ 1.08
CDC42EP1-202ENST00000415670 GPTP24298 496 aa21.77■■□□□ 1.08
CDC42EP1-202ENST00000415670 GTF2E1P29083 439 aaPredicted RBP21.77■■□□□ 1.08
CDC42EP1-202ENST00000415670 ALDH1B1P30837 517 aa21.77■■□□□ 1.08
CDC42EP1-202ENST00000415670 TTLL7Q6ZT98 887 aa21.77■■□□□ 1.08
CDC42EP1-202ENST00000415670 PSMD1Q99460 953 aa21.77■■□□□ 1.08
CDC42EP1-202ENST00000415670 CRY2Q49AN0 593 aa21.76■■□□□ 1.07
CDC42EP1-202ENST00000415670 JDP2Q8WYK2 163 aa21.76■■□□□ 1.07
CDC42EP1-202ENST00000415670 PLEKHF1Q96S99 279 aa21.76■■□□□ 1.07
CDC42EP1-202ENST00000415670 CASP8AP2Q9UKL3 1982 aa21.76■■□□□ 1.07
CDC42EP1-202ENST00000415670 EIF6P56537 245 aaKnown RBP21.75■■□□□ 1.07
CDC42EP1-202ENST00000415670 DLK2Q6UY11 383 aa21.75■■□□□ 1.07
CDC42EP1-202ENST00000415670 RUNDC1Q96C34 613 aa21.75■■□□□ 1.07
CDC42EP1-202ENST00000415670 NUP98P52948 1817 aa21.75■■□□□ 1.07
CDC42EP1-202ENST00000415670 TNRC18O15417 2968 aaPredicted RBP21.74■■□□□ 1.07
CDC42EP1-202ENST00000415670 SUSD4Q5VX71 490 aa21.74■■□□□ 1.07
CDC42EP1-202ENST00000415670 CCDC146Q8IYE0 955 aa21.74■■□□□ 1.07
CDC42EP1-202ENST00000415670 LARGE2Q8N3Y3 721 aa21.74■■□□□ 1.07
CDC42EP1-202ENST00000415670 TRPM7Q96QT4 1865 aa21.74■■□□□ 1.07
CDC42EP1-202ENST00000415670 DLG5Q8TDM6 1919 aa21.74■■□□□ 1.07
CDC42EP1-202ENST00000415670 UBN2Q6ZU65 1347 aa21.74■■□□□ 1.07
CDC42EP1-202ENST00000415670 ZIC5Q96T25 663 aa21.73■■□□□ 1.07
CDC42EP1-202ENST00000415670 RRP7AQ9Y3A4 280 aaKnown RBP21.73■■□□□ 1.07
CDC42EP1-202ENST00000415670 THSD7BQ9C0I4 1608 aa21.73■■□□□ 1.07
CDC42EP1-202ENST00000415670 LMOD1P29536 600 aaPredicted RBP21.72■■□□□ 1.07
CDC42EP1-202ENST00000415670 MLLT1Q03111 559 aaPredicted RBP21.72■■□□□ 1.07
CDC42EP1-202ENST00000415670 AOC3Q16853 763 aa21.72■■□□□ 1.07
CDC42EP1-202ENST00000415670 TLL2Q9Y6L7 1015 aa21.72■■□□□ 1.07
CDC42EP1-202ENST00000415670 SHTN1A0MZ66 631 aa21.71■■□□□ 1.07
CDC42EP1-202ENST00000415670 RGS19P49795 217 aa21.71■■□□□ 1.07
CDC42EP1-202ENST00000415670 GLIS2Q9BZE0 524 aaPredicted RBP21.71■■□□□ 1.07
CDC42EP1-202ENST00000415670 ZBTB3Q9H5J0 574 aa21.71■■□□□ 1.07
CDC42EP1-202ENST00000415670 MAPK8IP3Q9UPT6 1336 aa21.71■■□□□ 1.07
CDC42EP1-202ENST00000415670 NEFMP07197 916 aa21.7■■□□□ 1.06
CDC42EP1-202ENST00000415670 MYL6BP14649 208 aa21.7■■□□□ 1.06
CDC42EP1-202ENST00000415670 HOXA10P31260 410 aaPredicted RBP21.7■■□□□ 1.06
CDC42EP1-202ENST00000415670 RTF1Q92541 710 aaKnown RBP21.7■■□□□ 1.06
CDC42EP1-202ENST00000415670 RPGRQ92834 1020 aaKnown RBP21.7■■□□□ 1.06
CDC42EP1-202ENST00000415670 CFAP44Q96MT7 982 aa21.69■■□□□ 1.06
CDC42EP1-202ENST00000415670 MCOLN1Q9GZU1 580 aa21.69■■□□□ 1.06
CDC42EP1-202ENST00000415670 PPEF1O14829 653 aaPredicted RBP21.68■■□□□ 1.06
CDC42EP1-202ENST00000415670 CELF2O95319 508 aaKnown RBP21.68■■□□□ 1.06
CDC42EP1-202ENST00000415670 HIRAP54198 1017 aaPredicted RBP21.68■■□□□ 1.06
CDC42EP1-202ENST00000415670 CXCL9Q07325 125 aa21.68■■□□□ 1.06
CDC42EP1-202ENST00000415670 TAF7Q15545 349 aaPredicted RBP21.68■■□□□ 1.06
CDC42EP1-202ENST00000415670 USP50Q70EL3 339 aaPredicted RBP21.68■■□□□ 1.06
CDC42EP1-202ENST00000415670 ZNF428Q96B54 188 aa21.68■■□□□ 1.06
CDC42EP1-202ENST00000415670 THUMPD2Q9BTF0 503 aaKnown RBP21.68■■□□□ 1.06
CDC42EP1-202ENST00000415670 GPRC5DQ9NZD1 345 aa21.68■■□□□ 1.06
CDC42EP1-202ENST00000415670 MAP3K15Q6ZN16 1313 aa21.68■■□□□ 1.06
CDC42EP1-202ENST00000415670 APAF1O14727 1248 aa21.67■■□□□ 1.06
CDC42EP1-202ENST00000415670 PPIP5K2O43314 1243 aa21.67■■□□□ 1.06
CDC42EP1-202ENST00000415670 ECE1P42892 770 aa21.67■■□□□ 1.06
CDC42EP1-202ENST00000415670 SAPCD2Q86UD0 394 aa21.67■■□□□ 1.06
CDC42EP1-202ENST00000415670 BEGAINQ9BUH8 593 aa21.67■■□□□ 1.06
CDC42EP1-202ENST00000415670 ZNF408Q9H9D4 720 aa21.67■■□□□ 1.06
CDC42EP1-202ENST00000415670 GMPSP49915 693 aaPredicted RBP21.66■■□□□ 1.06
CDC42EP1-202ENST00000415670 NIM1KQ8IY84 436 aa21.66■■□□□ 1.06
CDC42EP1-202ENST00000415670 NYXQ9GZU5 481 aa21.66■■□□□ 1.06
CDC42EP1-202ENST00000415670 RGL2O15211 777 aa21.65■■□□□ 1.06
CDC42EP1-202ENST00000415670 NTSR2O95665 410 aa21.65■■□□□ 1.06
CDC42EP1-202ENST00000415670 ZNF34Q8IZ26 560 aa21.65■■□□□ 1.06
CDC42EP1-202ENST00000415670 RBM17Q96I25 401 aaKnown RBP21.65■■□□□ 1.06
CDC42EP1-202ENST00000415670 CRAMP1Q96RY5 1269 aa21.65■■□□□ 1.06
CDC42EP1-202ENST00000415670 ERVV-1B6SEH8 477 aa21.64■■□□□ 1.05
CDC42EP1-202ENST00000415670 TMPOP42166 694 aaKnown RBP21.64■■□□□ 1.05
CDC42EP1-202ENST00000415670 NFE2L2Q16236 605 aa21.64■■□□□ 1.05
CDC42EP1-202ENST00000415670 CC2D2BQ6DHV5 1058 aa21.64■■□□□ 1.05
CDC42EP1-202ENST00000415670 CIAPIN1Q6FI81 312 aa21.64■■□□□ 1.05
CDC42EP1-202ENST00000415670 TRPM4Q8TD43 1214 aa21.64■■□□□ 1.05
CDC42EP1-202ENST00000415670 TAF1P21675 1872 aa21.64■■□□□ 1.05
CDC42EP1-202ENST00000415670 RAD17O75943 681 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms