RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 CEP350Q5VT06 3117 aa26.56■■□□□ 1.84
PTPRU-203ENST00000415600 UBN2Q6ZU65 1347 aa26.56■■□□□ 1.84
PTPRU-203ENST00000415600 CACNA1SQ13698 1873 aa26.56■■□□□ 1.84
PTPRU-203ENST00000415600 NECTIN2Q92692 538 aa26.56■■□□□ 1.84
PTPRU-203ENST00000415600 RBM17Q96I25 401 aaKnown RBP26.56■■□□□ 1.84
PTPRU-203ENST00000415600 UTP14AQ9BVJ6 771 aaKnown RBP26.56■■□□□ 1.84
PTPRU-203ENST00000415600 COPS6Q7L5N1 327 aa26.55■■□□□ 1.84
PTPRU-203ENST00000415600 LRP10Q7Z4F1 713 aa26.55■■□□□ 1.84
PTPRU-203ENST00000415600 ABCC12Q96J65 1359 aa26.55■■□□□ 1.84
PTPRU-203ENST00000415600 AIMP1Q12904 312 aaKnown RBP26.54■■□□□ 1.84
PTPRU-203ENST00000415600 HDGFL1Q5TGJ6 251 aa26.54■■□□□ 1.84
PTPRU-203ENST00000415600 NLRP3Q96P20 1036 aa26.54■■□□□ 1.84
PTPRU-203ENST00000415600 NTSR2O95665 410 aa26.54■■□□□ 1.84
PTPRU-203ENST00000415600 HOXA10P31260 410 aaPredicted RBP26.54■■□□□ 1.84
PTPRU-203ENST00000415600 PROSER3Q2NL68 480 aa26.54■■□□□ 1.84
PTPRU-203ENST00000415600 XAGE3Q8WTP9 111 aa26.54■■□□□ 1.84
PTPRU-203ENST00000415600 CHMP4AQ9BY43 222 aa26.54■■□□□ 1.84
PTPRU-203ENST00000415600 DICER1Q9UPY3 1922 aaKnown RBP26.54■■□□□ 1.84
PTPRU-203ENST00000415600 ANXA1P04083 346 aa26.53■■□□□ 1.84
PTPRU-203ENST00000415600 DBF4Q9UBU7 674 aaPredicted RBP26.53■■□□□ 1.84
PTPRU-203ENST00000415600 APAF1O14727 1248 aa26.52■■□□□ 1.84
PTPRU-203ENST00000415600 GNAI1P63096 354 aa26.52■■□□□ 1.84
PTPRU-203ENST00000415600 CRAMP1Q96RY5 1269 aa26.51■■□□□ 1.83
PTPRU-203ENST00000415600 IFT57Q9NWB7 429 aa26.51■■□□□ 1.83
PTPRU-203ENST00000415600 HYPKQ9NX55 129 aa26.5■■□□□ 1.83
PTPRU-203ENST00000415600 CHPF2Q9P2E5 772 aa26.5■■□□□ 1.83
PTPRU-203ENST00000415600 IQCA1LA6NCM1 817 aa26.5■■□□□ 1.83
PTPRU-203ENST00000415600 TCIRG1Q13488 830 aa26.49■■□□□ 1.83
PTPRU-203ENST00000415600 KRT24Q2M2I5 525 aa26.49■■□□□ 1.83
PTPRU-203ENST00000415600 SLC10A5Q5PT55 438 aa26.49■■□□□ 1.83
PTPRU-203ENST00000415600 JDP2Q8WYK2 163 aa26.49■■□□□ 1.83
PTPRU-203ENST00000415600 PSMD1Q99460 953 aa26.49■■□□□ 1.83
PTPRU-203ENST00000415600 ZNF277Q9NRM2 450 aaPredicted RBP26.49■■□□□ 1.83
PTPRU-203ENST00000415600 DUSP27Q5VZP5 1158 aa26.48■■□□□ 1.83
PTPRU-203ENST00000415600 SYNE4Q8N205 404 aa26.48■■□□□ 1.83
PTPRU-203ENST00000415600 MBIPQ9NS73 344 aa26.48■■□□□ 1.83
PTPRU-203ENST00000415600 WDR90Q96KV7 1748 aa26.48■■□□□ 1.83
PTPRU-203ENST00000415600 IARSP41252 1262 aaKnown RBP26.47■■□□□ 1.83
PTPRU-203ENST00000415600 NLRP10Q86W26 655 aa26.47■■□□□ 1.83
PTPRU-203ENST00000415600 PLBD2Q8NHP8 589 aa26.47■■□□□ 1.83
PTPRU-203ENST00000415600 PPEF1O14829 653 aaPredicted RBP26.46■■□□□ 1.83
PTPRU-203ENST00000415600 ANKRD13DQ6ZTN6 518 aa26.46■■□□□ 1.83
PTPRU-203ENST00000415600 TRMT112Q9UI30 125 aaKnown RBP26.46■■□□□ 1.83
PTPRU-203ENST00000415600 SH3TC1Q8TE82 1336 aa26.45■■□□□ 1.83
PTPRU-203ENST00000415600 DDNO94850 711 aaPredicted RBP26.45■■□□□ 1.82
PTPRU-203ENST00000415600 OLFM4Q6UX06 510 aa26.45■■□□□ 1.82
PTPRU-203ENST00000415600 ZNF853P0CG23 659 aa26.44■■□□□ 1.82
PTPRU-203ENST00000415600 L3MBTL3Q96JM7 780 aaPredicted RBP26.43■■□□□ 1.82
PTPRU-203ENST00000415600 POTECB2RU33 542 aa26.41■■□□□ 1.82
PTPRU-203ENST00000415600 BBOX1O75936 387 aa26.41■■□□□ 1.82
PTPRU-203ENST00000415600 GOLGA2Q08379 1002 aa26.41■■□□□ 1.82
PTPRU-203ENST00000415600 DDX46Q7L014 1031 aaKnown RBP26.41■■□□□ 1.82
PTPRU-203ENST00000415600 ANKRD36CQ5JPF3 1778 aa26.41■■□□□ 1.82
PTPRU-203ENST00000415600 EIF6P56537 245 aaKnown RBP26.41■■□□□ 1.82
PTPRU-203ENST00000415600 SUPT20HQ8NEM7 779 aa26.4■■□□□ 1.82
PTPRU-203ENST00000415600 FZD9O00144 591 aa26.39■■□□□ 1.82
PTPRU-203ENST00000415600 HSP90B1P14625 803 aaKnown RBP26.39■■□□□ 1.82
PTPRU-203ENST00000415600 CCDC184Q52MB2 194 aa26.39■■□□□ 1.82
PTPRU-203ENST00000415600 CHADLQ6NUI6 762 aa26.39■■□□□ 1.82
PTPRU-203ENST00000415600 LARGE2Q8N3Y3 721 aa26.39■■□□□ 1.82
PTPRU-203ENST00000415600 VPS33BQ9H267 617 aa26.39■■□□□ 1.82
PTPRU-203ENST00000415600 ATP6V0A2Q9Y487 856 aa26.39■■□□□ 1.82
PTPRU-203ENST00000415600 TCERG1O14776 1098 aaKnown RBP26.38■■□□□ 1.81
PTPRU-203ENST00000415600 HCLS1P14317 486 aaPredicted RBP26.38■■□□□ 1.81
PTPRU-203ENST00000415600 C3orf67Q6ZVT6 689 aa26.38■■□□□ 1.81
PTPRU-203ENST00000415600 TMC4Q7Z404 712 aa26.38■■□□□ 1.81
PTPRU-203ENST00000415600 GPC2Q8N158 579 aa26.38■■□□□ 1.81
PTPRU-203ENST00000415600 DNAJC5GQ8N7S2 189 aa26.38■■□□□ 1.81
PTPRU-203ENST00000415600 HACL1Q9UJ83 578 aa26.38■■□□□ 1.81
PTPRU-203ENST00000415600 RIC3Q7Z5B4 369 aa26.37■■□□□ 1.81
PTPRU-203ENST00000415600 KLRG1Q96E93 195 aa26.37■■□□□ 1.81
PTPRU-203ENST00000415600 MRS2Q9HD23 443 aa26.37■■□□□ 1.81
PTPRU-203ENST00000415600 ABCC4O15439 1325 aa26.37■■□□□ 1.81
PTPRU-203ENST00000415600 CCDC27Q2M243 656 aa26.37■■□□□ 1.81
PTPRU-203ENST00000415600 CCDC30Q5VVM6 783 aa26.37■■□□□ 1.81
PTPRU-203ENST00000415600 ZNF541Q9H0D2 1346 aa26.36■■□□□ 1.81
PTPRU-203ENST00000415600 DDX58O95786 925 aaKnown RBP26.36■■□□□ 1.81
PTPRU-203ENST00000415600 PNMA8AQ86V59 439 aaPredicted RBP26.36■■□□□ 1.81
PTPRU-203ENST00000415600 LDHDQ86WU2 507 aa26.36■■□□□ 1.81
PTPRU-203ENST00000415600 NIM1KQ8IY84 436 aa26.36■■□□□ 1.81
PTPRU-203ENST00000415600 ISCA1Q9BUE6 129 aa26.36■■□□□ 1.81
PTPRU-203ENST00000415600 SCN4AP35499 1836 aa26.36■■□□□ 1.81
PTPRU-203ENST00000415600 SNED1Q8TER0 1413 aa26.35■■□□□ 1.81
PTPRU-203ENST00000415600 ELL2O00472 640 aaPredicted RBP26.35■■□□□ 1.81
PTPRU-203ENST00000415600 TRIM28Q13263 835 aaKnown RBP26.35■■□□□ 1.81
PTPRU-203ENST00000415600 TAF1DQ9H5J8 278 aaPredicted RBP26.35■■□□□ 1.81
PTPRU-203ENST00000415600 GRAPQ13588 217 aa26.34■■□□□ 1.81
PTPRU-203ENST00000415600 SP8Q8IXZ3 490 aa26.34■■□□□ 1.81
PTPRU-203ENST00000415600 GRAPLQ8TC17 118 aaPredicted RBP26.34■■□□□ 1.81
PTPRU-203ENST00000415600 ATP5J2-PTCD1G3V325 749 aa26.33■■□□□ 1.81
PTPRU-203ENST00000415600 LMOD1P29536 600 aaPredicted RBP26.33■■□□□ 1.81
PTPRU-203ENST00000415600 DPP8Q6V1X1 898 aaPredicted RBP26.33■■□□□ 1.81
PTPRU-203ENST00000415600 PPIP5K2O43314 1243 aa26.33■■□□□ 1.8
PTPRU-203ENST00000415600 NCBP3Q53F19 620 aaKnown RBP26.33■■□□□ 1.8
PTPRU-203ENST00000415600 EPHX2P34913 555 aa26.32■■□□□ 1.8
PTPRU-203ENST00000415600 EAPPQ56P03 285 aaPredicted RBP26.32■■□□□ 1.8
PTPRU-203ENST00000415600 HTRA3P83110 453 aa26.31■■□□□ 1.8
PTPRU-203ENST00000415600 MPNDQ8N594 471 aa26.31■■□□□ 1.8
PTPRU-203ENST00000415600 FAM89AQ96GI7 184 aa26.31■■□□□ 1.8
PTPRU-203ENST00000415600 STK31Q9BXU1 1019 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms