RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 NSFL1CQ9UNZ2 370 aaKnown RBP9.21□□□□□ -0.94
SIK3-203ENST00000415541 SMARCA5O60264 1052 aaPredicted RBP9.21□□□□□ -0.94
SIK3-203ENST00000415541 PKP1Q13835 747 aa9.21□□□□□ -0.94
SIK3-203ENST00000415541 GORABQ5T7V8 394 aa9.21□□□□□ -0.94
SIK3-203ENST00000415541 CNKSR2Q8WXI2 1034 aa9.21□□□□□ -0.94
SIK3-203ENST00000415541 CARD10Q9BWT7 1032 aa9.21□□□□□ -0.94
SIK3-203ENST00000415541 SLU7O95391 586 aaKnown RBP9.2□□□□□ -0.94
SIK3-203ENST00000415541 IVLP07476 585 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 INTS3Q68E01 1043 aaKnown RBP9.2□□□□□ -0.94
SIK3-203ENST00000415541 LEKR1Q6ZMV7 388 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 G2E3Q7L622 706 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 NFATC2IPQ8NCF5 419 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 DRC1Q96MC2 740 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 IL1RAPL2Q9NP60 686 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 RBM28Q9NW13 759 aaKnown RBP9.2□□□□□ -0.94
SIK3-203ENST00000415541 FAM53CQ9NYF3 392 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 PTPN14Q15678 1187 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 TMCO3Q6UWJ1 677 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 IFNL2Q8IZJ0 200 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 MEIS3Q99687 375 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 TMEM131LA2VDJ0 1609 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 PI4KAP2A4QPH2 592 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 PI4KAP1Q8N8J0 262 aa9.2□□□□□ -0.94
SIK3-203ENST00000415541 CHL1O00533 1208 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 GOLGA5Q8TBA6 731 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 SIL1Q9H173 461 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 DONSONQ9NYP3 566 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 CHPF2Q9P2E5 772 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 SETD1BQ9UPS6 1966 aaKnown RBP9.19□□□□□ -0.94
SIK3-203ENST00000415541 SRGAP3O43295 1099 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 CCDC192P0DO97 292 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 G3BP1Q13283 466 aaKnown RBP eCLIP9.19□□□□□ -0.94
SIK3-203ENST00000415541 ZGPATQ8N5A5 531 aaKnown RBP9.19□□□□□ -0.94
SIK3-203ENST00000415541 PTPRUQ92729 1446 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 POLR3GO15318 223 aaPredicted RBP9.19□□□□□ -0.94
SIK3-203ENST00000415541 AKAP4Q5JQC9 854 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 FBXO38Q6PIJ6 1188 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 IL17REQ8NFR9 667 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 GTF3C6Q969F1 213 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 KCNF1Q9H3M0 494 aa9.19□□□□□ -0.94
SIK3-203ENST00000415541 WDR33Q9C0J8 1336 aaKnown RBP9.19□□□□□ -0.94
SIK3-203ENST00000415541 NEMFO60524 1076 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 PTGS1P23219 599 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 NEK11Q8NG66 645 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 RRP15Q9Y3B9 282 aaKnown RBP9.18□□□□□ -0.94
SIK3-203ENST00000415541 ATP6V1DQ9Y5K8 247 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 AATKQ6ZMQ8 1374 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 UBAP1LF5GYI3 381 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 BRD1O95696 1058 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 COL3A1P02461 1466 aaPredicted RBP9.18□□□□□ -0.94
SIK3-203ENST00000415541 IFIT2P09913 472 aaKnown RBP9.18□□□□□ -0.94
SIK3-203ENST00000415541 MCCP23508 829 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 SPATA31D1Q6ZQQ2 1576 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 PPM1EQ8WY54 764 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 ZNF215Q9UL58 517 aaPredicted RBP9.18□□□□□ -0.94
SIK3-203ENST00000415541 ZDHHC9Q9Y397 364 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 RAD50Q92878 1312 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 RBM6P78332 1123 aaKnown RBP9.18□□□□□ -0.94
SIK3-203ENST00000415541 ZRSR1Q15695 479 aaKnown RBP9.18□□□□□ -0.94
SIK3-203ENST00000415541 ELF2Q15723 593 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 GRIPAP1Q4V328 841 aa9.18□□□□□ -0.94
SIK3-203ENST00000415541 CCDC85AQ96PX6 553 aaPredicted RBP9.18□□□□□ -0.94
SIK3-203ENST00000415541 PHAXQ9H814 394 aaKnown RBP9.18□□□□□ -0.94
SIK3-203ENST00000415541 MAP3K5Q99683 1374 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 AK9Q5TCS8 1911 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 KCNQ3O43525 872 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 TPM1P09493 284 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 ATP2B1P20020 1258 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 ATP6V1AP38606 617 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 NAA30Q147X3 362 aaPredicted RBP9.17□□□□□ -0.94
SIK3-203ENST00000415541 CCDC186Q7Z3E2 898 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 GPATCH3Q96I76 525 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 DBF4Q9UBU7 674 aaPredicted RBP9.17□□□□□ -0.94
SIK3-203ENST00000415541 PIK3R4Q99570 1358 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 ATP8B1O43520 1251 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 USP8P40818 1118 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 MAGEA9P43362 315 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 SRLQ86TD4 932 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 USP48Q86UV5 1035 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 FBXO18Q8NFZ0 1043 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 ZCRB1Q8TBF4 217 aaKnown RBP9.17□□□□□ -0.94
SIK3-203ENST00000415541 NGLY1Q96IV0 654 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 CT47A1Q5JQC4 288 aaPredicted RBP9.17□□□□□ -0.94
SIK3-203ENST00000415541 ARHGEF25Q86VW2 580 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 RPAP2Q8IXW5 612 aaPredicted RBP9.17□□□□□ -0.94
SIK3-203ENST00000415541 DNAAF4Q8WXU2 420 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 CXorf56Q9H5V9 222 aa9.17□□□□□ -0.94
SIK3-203ENST00000415541 GOLIM4O00461 696 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 UBE2HP62256 183 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.16□□□□□ -0.94
SIK3-203ENST00000415541 ANKRD20A12PQ8NF67 263 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 TMOD3Q9NYL9 352 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 TRIM66O15016 1216 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 RNMTO43148 476 aaKnown RBP9.16□□□□□ -0.94
SIK3-203ENST00000415541 MAP4K4O95819 1239 aaPredicted RBP9.16□□□□□ -0.94
SIK3-203ENST00000415541 NEUROD6Q96NK8 337 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 TRIM5Q9C035 493 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 ANO2Q9NQ90 1003 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 BTG4Q9NY30 223 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms