RNA–Protein interactions for RNA: ENST00000415497.6

CCND3-205, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 1,843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-205ENST00000415497 MYD88Q99836 296 aa31.41■■■□□ 2.62
CCND3-205ENST00000415497 UTRNP46939 3433 aa31.41■■■□□ 2.62
CCND3-205ENST00000415497 TRIM28Q13263 835 aaKnown RBP31.4■■■□□ 2.62
CCND3-205ENST00000415497 NUTM1Q86Y26 1132 aa31.4■■■□□ 2.62
CCND3-205ENST00000415497 UTP14AQ9BVJ6 771 aaKnown RBP31.4■■■□□ 2.62
CCND3-205ENST00000415497 KIAA1551Q9HCM1 1747 aa31.4■■■□□ 2.62
CCND3-205ENST00000415497 N4BP2Q86UW6 1770 aaPredicted RBP31.4■■■□□ 2.62
CCND3-205ENST00000415497 A0A0G2JLW4 131 aa31.4■■■□□ 2.62
CCND3-205ENST00000415497 ANKRD31Q8N7Z5 1873 aa31.39■■■□□ 2.62
CCND3-205ENST00000415497 DPEP1P16444 411 aa31.39■■■□□ 2.62
CCND3-205ENST00000415497 PDE6BP35913 854 aa31.38■■■□□ 2.61
CCND3-205ENST00000415497 FRAT1Q92837 279 aaPredicted RBP31.38■■■□□ 2.61
CCND3-205ENST00000415497 NEXNQ0ZGT2 675 aa31.38■■■□□ 2.61
CCND3-205ENST00000415497 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.38■■■□□ 2.61
CCND3-205ENST00000415497 DNAAF4Q8WXU2 420 aa31.38■■■□□ 2.61
CCND3-205ENST00000415497 ERFEQ4G0M1 354 aa31.37■■■□□ 2.61
CCND3-205ENST00000415497 TRMT112Q9UI30 125 aaKnown RBP31.37■■■□□ 2.61
CCND3-205ENST00000415497 CHRNA5P30532 468 aa31.36■■■□□ 2.61
CCND3-205ENST00000415497 GTF3C3Q9Y5Q9 886 aa31.36■■■□□ 2.61
CCND3-205ENST00000415497 CCDC191Q8NCU4 936 aa31.35■■■□□ 2.61
CCND3-205ENST00000415497 ABCC12Q96J65 1359 aa31.35■■■□□ 2.61
CCND3-205ENST00000415497 KCNA3P22001 575 aa31.35■■■□□ 2.61
CCND3-205ENST00000415497 PTPRCP08575 1304 aa31.34■■■□□ 2.61
CCND3-205ENST00000415497 F6X3S4 739 aa31.34■■■□□ 2.61
CCND3-205ENST00000415497 PDZRN3Q9UPQ7 1066 aa31.34■■■□□ 2.61
CCND3-205ENST00000415497 SH3TC1Q8TE82 1336 aa31.33■■■□□ 2.61
CCND3-205ENST00000415497 H0YIN7 160 aa31.33■■■□□ 2.61
CCND3-205ENST00000415497 IGKV5-2P06315 115 aa31.33■■■□□ 2.61
CCND3-205ENST00000415497 C2CD5Q86YS7 1000 aa31.33■■■□□ 2.61
CCND3-205ENST00000415497 BRPF1P55201 1214 aaPredicted RBP31.33■■■□□ 2.61
CCND3-205ENST00000415497 WWC3Q9ULE0 1092 aa31.33■■■□□ 2.61
CCND3-205ENST00000415497 CWC25Q9NXE8 425 aaPredicted RBP31.32■■■□□ 2.6
CCND3-205ENST00000415497 RIC1Q4ADV7 1423 aa31.31■■■□□ 2.6
CCND3-205ENST00000415497 BRCA1P38398 1863 aaKnown RBP31.31■■■□□ 2.6
CCND3-205ENST00000415497 KLRG2A4D1S0 409 aaPredicted RBP31.31■■■□□ 2.6
CCND3-205ENST00000415497 CWF19L2Q2TBE0 894 aaKnown RBP31.31■■■□□ 2.6
CCND3-205ENST00000415497 PELP1Q8IZL8 1130 aaKnown RBP31.31■■■□□ 2.6
CCND3-205ENST00000415497 PIM2Q9P1W9 311 aa31.31■■■□□ 2.6
CCND3-205ENST00000415497 DCAF8L1A6NGE4 600 aa31.3■■■□□ 2.6
CCND3-205ENST00000415497 NEURL1BA8MQ27 555 aa31.3■■■□□ 2.6
CCND3-205ENST00000415497 SYNE4Q8N205 404 aa31.3■■■□□ 2.6
CCND3-205ENST00000415497 FAM89AQ96GI7 184 aa31.3■■■□□ 2.6
CCND3-205ENST00000415497 GPR162Q16538 588 aa31.29■■■□□ 2.6
CCND3-205ENST00000415497 SLC10A5Q5PT55 438 aa31.29■■■□□ 2.6
CCND3-205ENST00000415497 LINS1Q8NG48 757 aa31.29■■■□□ 2.6
CCND3-205ENST00000415497 KIF16BQ96L93 1317 aa31.29■■■□□ 2.6
CCND3-205ENST00000415497 SRGNP10124 158 aa31.28■■■□□ 2.6
CCND3-205ENST00000415497 ZBTB38Q8NAP3 1195 aaPredicted RBP31.28■■■□□ 2.6
CCND3-205ENST00000415497 NOB1Q9ULX3 412 aaKnown RBP31.28■■■□□ 2.6
CCND3-205ENST00000415497 DLEC1Q9Y238 1755 aa31.28■■■□□ 2.6
CCND3-205ENST00000415497 COL11A2P13942 1736 aaPredicted RBP31.28■■■□□ 2.6
CCND3-205ENST00000415497 TNRC6CQ9HCJ0 1690 aaKnown RBP31.28■■■□□ 2.6
CCND3-205ENST00000415497 RTL5Q5HYW3 569 aaPredicted RBP31.27■■■□□ 2.6
CCND3-205ENST00000415497 BEND3Q5T5X7 828 aa31.26■■■□□ 2.6
CCND3-205ENST00000415497 SLC4A10Q6U841 1118 aa31.26■■■□□ 2.6
CCND3-205ENST00000415497 HCLS1P14317 486 aaPredicted RBP31.26■■■□□ 2.59
CCND3-205ENST00000415497 YBX3P16989 372 aaKnown RBP eCLIP31.26■■■□□ 2.591e-6■□□□□ 11
CCND3-205ENST00000415497 CRY2Q49AN0 593 aa31.26■■■□□ 2.59
CCND3-205ENST00000415497 C20orf194Q5TEA3 1177 aa31.26■■■□□ 2.59
CCND3-205ENST00000415497 ZKSCAN2Q63HK3 967 aa31.26■■■□□ 2.59
CCND3-205ENST00000415497 ZNF622Q969S3 477 aaKnown RBP eCLIP31.26■■■□□ 2.59
CCND3-205ENST00000415497 NLRP3Q96P20 1036 aa31.26■■■□□ 2.59
CCND3-205ENST00000415497 BCS1LQ9Y276 419 aa31.26■■■□□ 2.59
CCND3-205ENST00000415497 PCCAP05165 728 aaPredicted RBP31.25■■■□□ 2.59
CCND3-205ENST00000415497 MASTLQ96GX5 879 aa31.25■■■□□ 2.59
CCND3-205ENST00000415497 DALRD3Q5D0E6 543 aaKnown RBP31.24■■■□□ 2.59
CCND3-205ENST00000415497 GCKRQ14397 625 aa31.24■■■□□ 2.59
CCND3-205ENST00000415497 NPR1P16066 1061 aa31.23■■■□□ 2.59
CCND3-205ENST00000415497 STYK1Q6J9G0 422 aa31.23■■■□□ 2.59
CCND3-205ENST00000415497 TTLL6Q8N841 843 aa31.23■■■□□ 2.59
CCND3-205ENST00000415497 IRS4O14654 1257 aaPredicted RBP31.22■■■□□ 2.59
CCND3-205ENST00000415497 IPO8O15397 1037 aaKnown RBP31.22■■■□□ 2.59
CCND3-205ENST00000415497 C3orf67Q6ZVT6 689 aa31.22■■■□□ 2.59
CCND3-205ENST00000415497 TNNQ9UQP3 1299 aa31.22■■■□□ 2.59
CCND3-205ENST00000415497 CLUAP1Q96AJ1 413 aa31.21■■■□□ 2.59
CCND3-205ENST00000415497 DDX60Q8IY21 1712 aaKnown RBP31.2■■■□□ 2.59
CCND3-205ENST00000415497 ATF7IPQ6VMQ6 1270 aa31.2■■■□□ 2.59
CCND3-205ENST00000415497 JARID2Q92833 1246 aaPredicted RBP31.2■■■□□ 2.59
CCND3-205ENST00000415497 CNKSR1Q969H4 720 aa31.2■■■□□ 2.59
CCND3-205ENST00000415497 SRCIN1Q9C0H9 1055 aa31.2■■■□□ 2.59
CCND3-205ENST00000415497 HSP90B1P14625 803 aaKnown RBP31.19■■■□□ 2.58
CCND3-205ENST00000415497 ARHGAP45Q92619 1136 aa31.19■■■□□ 2.58
CCND3-205ENST00000415497 RPGRQ92834 1020 aaKnown RBP31.19■■■□□ 2.58
CCND3-205ENST00000415497 TRIM27P14373 513 aa31.19■■■□□ 2.58
CCND3-205ENST00000415497 API5Q9BZZ5 524 aaKnown RBP31.19■■■□□ 2.58
CCND3-205ENST00000415497 GRIN3BO60391 1043 aa31.18■■■□□ 2.58
CCND3-205ENST00000415497 ALDH1L1O75891 902 aa31.18■■■□□ 2.58
CCND3-205ENST00000415497 UBE3BQ7Z3V4 1068 aa31.18■■■□□ 2.58
CCND3-205ENST00000415497 FTSJ3Q8IY81 847 aaKnown RBP31.18■■■□□ 2.58
CCND3-205ENST00000415497 PANK1Q8TE04 598 aa31.18■■■□□ 2.58
CCND3-205ENST00000415497 CDHR2Q9BYE9 1310 aa31.18■■■□□ 2.58
CCND3-205ENST00000415497 LAMB2P55268 1798 aa31.17■■■□□ 2.58
CCND3-205ENST00000415497 H7C1W4 665 aa31.17■■■□□ 2.58
CCND3-205ENST00000415497 PDE3AQ14432 1141 aa31.17■■■□□ 2.58
CCND3-205ENST00000415497 ARFGEF1Q9Y6D6 1849 aa31.16■■■□□ 2.58
CCND3-205ENST00000415497 ALDH1B1P30837 517 aa31.16■■■□□ 2.58
CCND3-205ENST00000415497 HOXA10P31260 410 aaPredicted RBP31.16■■■□□ 2.58
CCND3-205ENST00000415497 PRPF40BQ6NWY9 871 aaKnown RBP31.15■■■□□ 2.58
CCND3-205ENST00000415497 DZIP1LQ8IYY4 767 aaKnown RBP31.15■■■□□ 2.58
CCND3-205ENST00000415497 CRBNQ96SW2 442 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms