RNA–Protein interactions for RNA: ENST00000415469.5

LINC00858-201, long intergenic non-protein coding RNA 858, humanhuman

TSL 2 BASIC

Gene LINC00858, Length 2,685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-201ENST00000415469 COL5A2P05997 1499 aaPredicted RBP11.31□□□□□ -0.6
LINC00858-201ENST00000415469 STRCQ7RTU9 1775 aa11.31□□□□□ -0.6
LINC00858-201ENST00000415469 USP42Q9H9J4 1324 aaKnown RBP11.3□□□□□ -0.6
LINC00858-201ENST00000415469 A0A0D9SFI3 127 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
LINC00858-201ENST00000415469 GDPD2Q9HCC8 539 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 GOLGA6L22H0YM25 854 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 AK2P54819 239 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 SLFNL1Q499Z3 407 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 ERC1Q8IUD2 1116 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 TCEANC2Q96MN5 208 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 CCDC85AQ96PX6 553 aaPredicted RBP11.3□□□□□ -0.6
LINC00858-201ENST00000415469 GRPEL1Q9HAV7 217 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 LMBRD1Q9NUN5 540 aa11.3□□□□□ -0.6
LINC00858-201ENST00000415469 EVA1CP58658 441 aa11.29□□□□□ -0.6
LINC00858-201ENST00000415469 ANAPC15P60006 121 aa11.29□□□□□ -0.6
LINC00858-201ENST00000415469 FSD1Q9BTV5 496 aa11.29□□□□□ -0.6
LINC00858-201ENST00000415469 LMTK3Q96Q04 1460 aa11.29□□□□□ -0.6
LINC00858-201ENST00000415469 PCDH11XQ9BZA7 1347 aa11.29□□□□□ -0.6
LINC00858-201ENST00000415469 PCDH11YQ9BZA8 1340 aa11.29□□□□□ -0.6
LINC00858-201ENST00000415469 PTPN12Q05209 780 aaKnown RBP11.29□□□□□ -0.6
LINC00858-201ENST00000415469 LMBR1LQ6UX01 489 aa11.29□□□□□ -0.6
LINC00858-201ENST00000415469 RUFY3Q7L099 469 aa11.29□□□□□ -0.6
LINC00858-201ENST00000415469 GPT2Q8TD30 523 aa11.29□□□□□ -0.6
LINC00858-201ENST00000415469 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
LINC00858-201ENST00000415469 CWC22Q9HCG8 908 aaKnown RBP11.29□□□□□ -0.6
LINC00858-201ENST00000415469 DBNLQ9UJU6 430 aaKnown RBP11.29□□□□□ -0.6
LINC00858-201ENST00000415469 RFX5P48382 616 aaPredicted RBP11.28□□□□□ -0.6
LINC00858-201ENST00000415469 ZNF589Q86UQ0 364 aaPredicted RBP11.28□□□□□ -0.6
LINC00858-201ENST00000415469 JAKMIP1Q96N16 626 aaKnown RBP11.28□□□□□ -0.6
LINC00858-201ENST00000415469 DNAJC2Q99543 621 aaKnown RBP11.28□□□□□ -0.6
LINC00858-201ENST00000415469 IL2RBP14784 551 aa11.28□□□□□ -0.6
LINC00858-201ENST00000415469 KCNJ4P48050 445 aa11.28□□□□□ -0.6
LINC00858-201ENST00000415469 DBNDD2Q9BQY9 259 aa11.28□□□□□ -0.6
LINC00858-201ENST00000415469 SOS2Q07890 1332 aaPredicted RBP11.27□□□□□ -0.6
LINC00858-201ENST00000415469 CUL4AQ13619 759 aa11.27□□□□□ -0.6
LINC00858-201ENST00000415469 CCDC129Q6ZRS4 1044 aa11.27□□□□□ -0.6
LINC00858-201ENST00000415469 EVI5LQ96CN4 794 aa11.27□□□□□ -0.6
LINC00858-201ENST00000415469 PLBD2Q8NHP8 589 aa11.27□□□□□ -0.61
LINC00858-201ENST00000415469 TTC14Q96N46 770 aa11.27□□□□□ -0.61
LINC00858-201ENST00000415469 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.61
LINC00858-201ENST00000415469 PARP4Q9UKK3 1724 aaKnown RBP11.27□□□□□ -0.61
LINC00858-201ENST00000415469 TNNI3KQ59H18 835 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 CLEC17AQ6ZS10 378 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 SEC62Q99442 399 aaKnown RBP11.26□□□□□ -0.61
LINC00858-201ENST00000415469 ABCA3Q99758 1704 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 ASAP1Q9ULH1 1129 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 FPGT-TNNI3KV9GXZ4 949 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 CCDC171Q6TFL3 1326 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 SHANK3Q9BYB0 1731 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 CASP7P55210 303 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 KLHL40Q2TBA0 621 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 SKOR2Q2VWA4 1001 aaPredicted RBP11.26□□□□□ -0.61
LINC00858-201ENST00000415469 DDX46Q7L014 1031 aaKnown RBP11.26□□□□□ -0.61
LINC00858-201ENST00000415469 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 NECAB1Q8N987 351 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 RRAGDQ9NQL2 400 aaPredicted RBP11.26□□□□□ -0.61
LINC00858-201ENST00000415469 KCPQ6ZWJ8 1503 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 LAMB4A4D0S4 1761 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 KAT6BQ8WYB5 2073 aa11.26□□□□□ -0.61
LINC00858-201ENST00000415469 BTG4Q9NY30 223 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 RPAP1Q9BWH6 1393 aaPredicted RBP11.25□□□□□ -0.61
LINC00858-201ENST00000415469 TOGARAM1Q9Y4F4 1720 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 A0A0G2JS52 829 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 BRD1O95696 1058 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 MCM2P49736 904 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 MRE11P49959 708 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 FOXO4P98177 505 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 LRRC24Q50LG9 513 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 RUFY2Q8WXA3 655 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 NEUROD6Q96NK8 337 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 COL15A1P39059 1388 aa11.25□□□□□ -0.61
LINC00858-201ENST00000415469 TIMM10P62072 90 aa11.24□□□□□ -0.61
LINC00858-201ENST00000415469 ZSCAN23Q3MJ62 389 aa11.24□□□□□ -0.61
LINC00858-201ENST00000415469 CREB3L3Q68CJ9 461 aa11.24□□□□□ -0.61
LINC00858-201ENST00000415469 SYNE4Q8N205 404 aa11.24□□□□□ -0.61
LINC00858-201ENST00000415469 PUS3Q9BZE2 481 aaKnown RBP11.24□□□□□ -0.61
LINC00858-201ENST00000415469 GADD45BO75293 160 aaPredicted RBP11.24□□□□□ -0.61
LINC00858-201ENST00000415469 SYTL4Q96C24 671 aaPredicted RBP11.24□□□□□ -0.61
LINC00858-201ENST00000415469 CARD10Q9BWT7 1032 aa11.24□□□□□ -0.61
LINC00858-201ENST00000415469 COPRSQ9NQ92 184 aa11.24□□□□□ -0.61
LINC00858-201ENST00000415469 PDRG1Q9NUG6 133 aa11.24□□□□□ -0.61
LINC00858-201ENST00000415469 ST3GAL1Q11201 340 aa11.23□□□□□ -0.61
LINC00858-201ENST00000415469 NECTIN1Q15223 517 aa11.23□□□□□ -0.61
LINC00858-201ENST00000415469 RABL6Q3YEC7 729 aaPredicted RBP11.23□□□□□ -0.61
LINC00858-201ENST00000415469 DNAJC10Q8IXB1 793 aa11.23□□□□□ -0.61
LINC00858-201ENST00000415469 CWC25Q9NXE8 425 aaPredicted RBP11.23□□□□□ -0.61
LINC00858-201ENST00000415469 TMEM63CQ9P1W3 806 aa11.23□□□□□ -0.61
LINC00858-201ENST00000415469 ABCC6O95255 1503 aa11.23□□□□□ -0.61
LINC00858-201ENST00000415469 TJP1Q07157 1748 aa11.23□□□□□ -0.61
LINC00858-201ENST00000415469 SLC27A2O14975 620 aa11.23□□□□□ -0.61
LINC00858-201ENST00000415469 TMOD3Q9NYL9 352 aa11.23□□□□□ -0.61
LINC00858-201ENST00000415469 UBR2Q8IWV8 1755 aa11.23□□□□□ -0.61
LINC00858-201ENST00000415469 GPTP24298 496 aa11.22□□□□□ -0.61
LINC00858-201ENST00000415469 PIGBQ92521 554 aa11.22□□□□□ -0.61
LINC00858-201ENST00000415469 LIMCH1Q9UPQ0 1083 aa11.22□□□□□ -0.61
LINC00858-201ENST00000415469 NUP188Q5SRE5 1749 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms