RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 ELL2O00472 640 aaPredicted RBP26.12■■□□□ 1.77
CTTN-205ENST00000415461 CCDC93Q567U6 631 aa26.12■■□□□ 1.77
CTTN-205ENST00000415461 TCIRG1Q13488 830 aa26.11■■□□□ 1.77
CTTN-205ENST00000415461 NLRP10Q86W26 655 aa26.11■■□□□ 1.77
CTTN-205ENST00000415461 RPGRQ92834 1020 aaKnown RBP26.11■■□□□ 1.77
CTTN-205ENST00000415461 ALDH1B1P30837 517 aa26.1■■□□□ 1.77
CTTN-205ENST00000415461 CCDC27Q2M243 656 aa26.1■■□□□ 1.77
CTTN-205ENST00000415461 C8orf58Q8NAV2 365 aa26.1■■□□□ 1.77
CTTN-205ENST00000415461 ANKRD36CQ5JPF3 1778 aa26.1■■□□□ 1.77
CTTN-205ENST00000415461 WWC1Q8IX03 1113 aa26.09■■□□□ 1.77
CTTN-205ENST00000415461 TSR2Q969E8 191 aaKnown RBP26.09■■□□□ 1.77
CTTN-205ENST00000415461 ZNF428Q96B54 188 aa26.09■■□□□ 1.77
CTTN-205ENST00000415461 HYPKQ9NX55 129 aa26.09■■□□□ 1.77
CTTN-205ENST00000415461 GLTPD2A6NH11 291 aa26.08■■□□□ 1.77
CTTN-205ENST00000415461 TOMM70O94826 608 aa26.08■■□□□ 1.77
CTTN-205ENST00000415461 HOXA10P31260 410 aaPredicted RBP26.08■■□□□ 1.77
CTTN-205ENST00000415461 PLBD2Q8NHP8 589 aa26.08■■□□□ 1.77
CTTN-205ENST00000415461 RRAGCQ9HB90 399 aa26.08■■□□□ 1.77
CTTN-205ENST00000415461 CEP350Q5VT06 3117 aa26.08■■□□□ 1.77
CTTN-205ENST00000415461 ANKRD13DQ6ZTN6 518 aa26.07■■□□□ 1.76
CTTN-205ENST00000415461 RNF123Q5XPI4 1314 aa26.07■■□□□ 1.76
CTTN-205ENST00000415461 SLC10A5Q5PT55 438 aa26.06■■□□□ 1.76
CTTN-205ENST00000415461 SLC51AQ86UW1 340 aa26.06■■□□□ 1.76
CTTN-205ENST00000415461 SYNE4Q8N205 404 aa26.06■■□□□ 1.76
CTTN-205ENST00000415461 SNED1Q8TER0 1413 aa26.05■■□□□ 1.76
CTTN-205ENST00000415461 CCDC88AQ3V6T2 1871 aa26.05■■□□□ 1.76
CTTN-205ENST00000415461 FKBP4Q02790 459 aaKnown RBP eCLIP26.05■■□□□ 1.76
CTTN-205ENST00000415461 TSPYL6Q8N831 410 aa26.05■■□□□ 1.76
CTTN-205ENST00000415461 RBM17Q96I25 401 aaKnown RBP26.05■■□□□ 1.76
CTTN-205ENST00000415461 NLRP3Q96P20 1036 aa26.05■■□□□ 1.76
CTTN-205ENST00000415461 TRMT112Q9UI30 125 aaKnown RBP26.05■■□□□ 1.76
CTTN-205ENST00000415461 HCLS1P14317 486 aaPredicted RBP26.04■■□□□ 1.76
CTTN-205ENST00000415461 HSPA6P17066 643 aa26.04■■□□□ 1.76
CTTN-205ENST00000415461 C16orf71Q8IYS4 520 aaPredicted RBP26.04■■□□□ 1.76
CTTN-205ENST00000415461 RTKN2Q8IZC4 609 aa26.04■■□□□ 1.76
CTTN-205ENST00000415461 PHAXQ9H814 394 aaKnown RBP26.04■■□□□ 1.76
CTTN-205ENST00000415461 ZNF277Q9NRM2 450 aaPredicted RBP26.04■■□□□ 1.76
CTTN-205ENST00000415461 SH3TC1Q8TE82 1336 aa26.04■■□□□ 1.76
CTTN-205ENST00000415461 ATP5J2-PTCD1G3V325 749 aa26.03■■□□□ 1.76
CTTN-205ENST00000415461 CRAMP1Q96RY5 1269 aa26.03■■□□□ 1.76
CTTN-205ENST00000415461 PPEF1O14829 653 aaPredicted RBP26.02■■□□□ 1.76
CTTN-205ENST00000415461 ISCA1Q9BUE6 129 aa26.02■■□□□ 1.76
CTTN-205ENST00000415461 SALL2Q9Y467 1007 aaPredicted RBP26.02■■□□□ 1.76
CTTN-205ENST00000415461 GOLGA2Q08379 1002 aa26.01■■□□□ 1.75
CTTN-205ENST00000415461 RBM46Q8TBY0 533 aaKnown RBP26.01■■□□□ 1.75
CTTN-205ENST00000415461 DICER1Q9UPY3 1922 aaKnown RBP26■■□□□ 1.75
CTTN-205ENST00000415461 ABCC4O15439 1325 aa26■■□□□ 1.75
CTTN-205ENST00000415461 IL16Q14005 1332 aa26■■□□□ 1.75
CTTN-205ENST00000415461 TCERG1O14776 1098 aaKnown RBP26■■□□□ 1.75
CTTN-205ENST00000415461 NCBP3Q53F19 620 aaKnown RBP26■■□□□ 1.75
CTTN-205ENST00000415461 DPY19L2Q6NUT2 758 aa26■■□□□ 1.75
CTTN-205ENST00000415461 RIC3Q7Z5B4 369 aa26■■□□□ 1.75
CTTN-205ENST00000415461 CCDC30Q5VVM6 783 aa25.99■■□□□ 1.75
CTTN-205ENST00000415461 FAM9BQ8IZU0 186 aa25.99■■□□□ 1.75
CTTN-205ENST00000415461 VEGFAP15692 232 aaPredicted RBP25.98■■□□□ 1.75
CTTN-205ENST00000415461 CC2D2BQ6DHV5 1058 aa25.98■■□□□ 1.75
CTTN-205ENST00000415461 PSMD1Q99460 953 aa25.98■■□□□ 1.75
CTTN-205ENST00000415461 WDR90Q96KV7 1748 aa25.97■■□□□ 1.75
CTTN-205ENST00000415461 FANCIQ9NVI1 1328 aa25.97■■□□□ 1.75
CTTN-205ENST00000415461 POTECB2RU33 542 aa25.97■■□□□ 1.75
CTTN-205ENST00000415461 IARSP41252 1262 aaKnown RBP25.97■■□□□ 1.75
CTTN-205ENST00000415461 FAM89AQ96GI7 184 aa25.97■■□□□ 1.75
CTTN-205ENST00000415461 DDNO94850 711 aaPredicted RBP25.96■■□□□ 1.75
CTTN-205ENST00000415461 TWISTNBQ3B726 338 aaPredicted RBP25.96■■□□□ 1.75
CTTN-205ENST00000415461 LAMB2P55268 1798 aa25.96■■□□□ 1.75
CTTN-205ENST00000415461 ZNF541Q9H0D2 1346 aa25.95■■□□□ 1.75
CTTN-205ENST00000415461 RTL5Q5HYW3 569 aaPredicted RBP25.95■■□□□ 1.74
CTTN-205ENST00000415461 MYD88Q99836 296 aa25.95■■□□□ 1.74
CTTN-205ENST00000415461 CHMP4AQ9BY43 222 aa25.95■■□□□ 1.74
CTTN-205ENST00000415461 TRIM28Q13263 835 aaKnown RBP25.94■■□□□ 1.74
CTTN-205ENST00000415461 COL4A5P29400 1685 aa25.93■■□□□ 1.74
CTTN-205ENST00000415461 FSTL1Q12841 308 aa25.93■■□□□ 1.74
CTTN-205ENST00000415461 DDX46Q7L014 1031 aaKnown RBP25.93■■□□□ 1.74
CTTN-205ENST00000415461 WDR63Q8IWG1 891 aa25.93■■□□□ 1.74
CTTN-205ENST00000415461 ATP6V0A2Q9Y487 856 aa25.93■■□□□ 1.74
CTTN-205ENST00000415461 DDX60Q8IY21 1712 aaKnown RBP25.93■■□□□ 1.74
CTTN-205ENST00000415461 DDX58O95786 925 aaKnown RBP25.92■■□□□ 1.74
CTTN-205ENST00000415461 STK31Q9BXU1 1019 aa25.92■■□□□ 1.74
CTTN-205ENST00000415461 GRAPQ13588 217 aa25.91■■□□□ 1.74
CTTN-205ENST00000415461 GRIPAP1Q4V328 841 aa25.91■■□□□ 1.74
CTTN-205ENST00000415461 SMC1BQ8NDV3 1235 aa25.91■■□□□ 1.74
CTTN-205ENST00000415461 GRAPLQ8TC17 118 aaPredicted RBP25.91■■□□□ 1.74
CTTN-205ENST00000415461 FZD9O00144 591 aa25.9■■□□□ 1.74
CTTN-205ENST00000415461 IRS4O14654 1257 aaPredicted RBP25.9■■□□□ 1.74
CTTN-205ENST00000415461 BBOX1O75936 387 aa25.9■■□□□ 1.74
CTTN-205ENST00000415461 METTL22Q9BUU2 404 aaPredicted RBP25.9■■□□□ 1.74
CTTN-205ENST00000415461 SPINK5Q9NQ38 1064 aaPredicted RBP25.9■■□□□ 1.74
CTTN-205ENST00000415461 MAP3K2Q9Y2U5 619 aa25.9■■□□□ 1.74
CTTN-205ENST00000415461 APLP1P51693 650 aa25.89■■□□□ 1.74
CTTN-205ENST00000415461 TMX4Q9H1E5 349 aaPredicted RBP25.89■■□□□ 1.74
CTTN-205ENST00000415461 SF3B3Q15393 1217 aaKnown RBP25.88■■□□□ 1.73
CTTN-205ENST00000415461 G2E3Q7L622 706 aa25.88■■□□□ 1.73
CTTN-205ENST00000415461 ZBTB38Q8NAP3 1195 aaPredicted RBP25.88■■□□□ 1.73
CTTN-205ENST00000415461 JDP2Q8WYK2 163 aa25.88■■□□□ 1.73
CTTN-205ENST00000415461 L3MBTL3Q96JM7 780 aaPredicted RBP25.88■■□□□ 1.73
CTTN-205ENST00000415461 PI4KAP2A4QPH2 592 aa25.87■■□□□ 1.73
CTTN-205ENST00000415461 KSR2Q6VAB6 950 aa25.87■■□□□ 1.73
CTTN-205ENST00000415461 SP8Q8IXZ3 490 aa25.87■■□□□ 1.73
CTTN-205ENST00000415461 LARGE2Q8N3Y3 721 aa25.87■■□□□ 1.73
CTTN-205ENST00000415461 PI4KAP1Q8N8J0 262 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms