RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 UIMC1Q96RL1 719 aa21.21■□□□□ 0.99
SHANK3-202ENST00000414786 IQCGQ9H095 443 aaKnown RBP21.21■□□□□ 0.99
SHANK3-202ENST00000414786 GEN1Q17RS7 908 aa21.21■□□□□ 0.99
SHANK3-202ENST00000414786 NBPF6Q5VWK0 638 aa21.21■□□□□ 0.99
SHANK3-202ENST00000414786 NBPF5PQ86XG9 351 aaPredicted RBP21.21■□□□□ 0.99
SHANK3-202ENST00000414786 NBPF4Q96M43 638 aa21.21■□□□□ 0.99
SHANK3-202ENST00000414786 TSPY3P0CV98 308 aa21.21■□□□□ 0.99
SHANK3-202ENST00000414786 TSPY8P0CW00 308 aa21.21■□□□□ 0.99
SHANK3-202ENST00000414786 YEATS4O95619 227 aa21.21■□□□□ 0.99
SHANK3-202ENST00000414786 SMC1BQ8NDV3 1235 aa21.21■□□□□ 0.99
SHANK3-202ENST00000414786 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
SHANK3-202ENST00000414786 KRT32Q14532 448 aa21.2■□□□□ 0.98
SHANK3-202ENST00000414786 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
SHANK3-202ENST00000414786 CLIP2Q9UDT6 1046 aa21.2■□□□□ 0.98
SHANK3-202ENST00000414786 ARHGAP5Q13017 1502 aa21.2■□□□□ 0.98
SHANK3-202ENST00000414786 ERCC5P28715 1186 aaPredicted RBP21.2■□□□□ 0.98
SHANK3-202ENST00000414786 CCDC6Q16204 474 aa21.2■□□□□ 0.98
SHANK3-202ENST00000414786 NOD1Q9Y239 953 aa21.2■□□□□ 0.98
SHANK3-202ENST00000414786 SLU7O95391 586 aaKnown RBP21.2■□□□□ 0.98
SHANK3-202ENST00000414786 GABPAQ06546 454 aa21.2■□□□□ 0.98
SHANK3-202ENST00000414786 PPP1R12AO14974 1030 aaPredicted RBP21.19■□□□□ 0.98
SHANK3-202ENST00000414786 MAP7D1Q3KQU3 841 aa21.19■□□□□ 0.98
SHANK3-202ENST00000414786 FSIP1Q8NA03 581 aa21.19■□□□□ 0.98
SHANK3-202ENST00000414786 SBNO2Q9Y2G9 1366 aa21.18■□□□□ 0.98
SHANK3-202ENST00000414786 RAPGEF3O95398 923 aa21.18■□□□□ 0.98
SHANK3-202ENST00000414786 C16orf45Q96MC5 204 aaPredicted RBP21.18■□□□□ 0.98
SHANK3-202ENST00000414786 SKAP1Q86WV1 359 aa21.18■□□□□ 0.98
SHANK3-202ENST00000414786 RNF34Q969K3 372 aa21.18■□□□□ 0.98
SHANK3-202ENST00000414786 CFAP57Q96MR6 1250 aa21.18■□□□□ 0.98
SHANK3-202ENST00000414786 PLIN2Q99541 437 aa21.18■□□□□ 0.98
SHANK3-202ENST00000414786 LRRC2Q9BYS8 371 aa21.18■□□□□ 0.98
SHANK3-202ENST00000414786 SNX16P57768 344 aa21.18■□□□□ 0.98
SHANK3-202ENST00000414786 PDCL2Q8N4E4 241 aa21.18■□□□□ 0.98
SHANK3-202ENST00000414786 TBC1D5Q92609 795 aa21.17■□□□□ 0.98
SHANK3-202ENST00000414786 FNBP4Q8N3X1 1017 aaPredicted RBP21.17■□□□□ 0.98
SHANK3-202ENST00000414786 KIAA0753Q2KHM9 967 aa21.17■□□□□ 0.98
SHANK3-202ENST00000414786 LDHAL6AQ6ZMR3 332 aa21.17■□□□□ 0.98
SHANK3-202ENST00000414786 LRRC45Q96CN5 670 aa21.17■□□□□ 0.98
SHANK3-202ENST00000414786 CCDC117Q8IWD4 279 aaPredicted RBP21.17■□□□□ 0.98
SHANK3-202ENST00000414786 TMEM57Q8N5G2 664 aa21.17■□□□□ 0.98
SHANK3-202ENST00000414786 ZSCAN31Q96LW9 406 aaPredicted RBP21.17■□□□□ 0.98
SHANK3-202ENST00000414786 EXOC1Q9NV70 894 aa21.17■□□□□ 0.98
SHANK3-202ENST00000414786 TTF1Q15361 905 aaPredicted RBP21.16■□□□□ 0.98
SHANK3-202ENST00000414786 MAP9Q49MG5 647 aa21.16■□□□□ 0.98
SHANK3-202ENST00000414786 OGFOD1Q8N543 542 aa21.16■□□□□ 0.98
SHANK3-202ENST00000414786 CCDC196A0A1B0GTZ2 297 aa21.16■□□□□ 0.98
SHANK3-202ENST00000414786 SATB1Q01826 763 aa21.16■□□□□ 0.98
SHANK3-202ENST00000414786 PPP1R21Q6ZMI0 780 aa21.16■□□□□ 0.98
SHANK3-202ENST00000414786 GTF2F1P35269 517 aaKnown RBP eCLIP21.16■□□□□ 0.981e-6■■■■□ 23.3
SHANK3-202ENST00000414786 UAP1Q16222 522 aaPredicted RBP21.16■□□□□ 0.98
SHANK3-202ENST00000414786 TRIM47Q96LD4 638 aa21.16■□□□□ 0.98
SHANK3-202ENST00000414786 UBA7P41226 1012 aa21.16■□□□□ 0.98
SHANK3-202ENST00000414786 TTC21AQ8NDW8 1320 aa21.15■□□□□ 0.98
SHANK3-202ENST00000414786 NCBP1Q09161 790 aaKnown RBP21.15■□□□□ 0.98
SHANK3-202ENST00000414786 CRCPO75575 148 aa21.15■□□□□ 0.98
SHANK3-202ENST00000414786 C6orf163Q5TEZ5 329 aa21.15■□□□□ 0.98
SHANK3-202ENST00000414786 BAG3O95817 575 aa21.15■□□□□ 0.98
SHANK3-202ENST00000414786 RAB11FIP3O75154 756 aa21.15■□□□□ 0.98
SHANK3-202ENST00000414786 ANXA1P04083 346 aa21.15■□□□□ 0.98
SHANK3-202ENST00000414786 PDE4BQ07343 736 aa21.14■□□□□ 0.98
SHANK3-202ENST00000414786 CCDC25Q86WR0 208 aa21.14■□□□□ 0.97
SHANK3-202ENST00000414786 KCNA4P22459 653 aa21.14■□□□□ 0.97
SHANK3-202ENST00000414786 SREK1Q8WXA9 508 aaKnown RBP21.14■□□□□ 0.97
SHANK3-202ENST00000414786 USP16Q9Y5T5 823 aa21.14■□□□□ 0.97
SHANK3-202ENST00000414786 SELENOSQ9BQE4 189 aa21.14■□□□□ 0.97
SHANK3-202ENST00000414786 MFSD6Q6ZSS7 791 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 STXBP4Q6ZWJ1 553 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 NAP1L3Q99457 506 aaPredicted RBP21.13■□□□□ 0.97
SHANK3-202ENST00000414786 ANO3Q9BYT9 981 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 ZSCAN12O43309 604 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 KRT9P35527 623 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 BEGAINQ9BUH8 593 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 HDAC9Q9UKV0 1011 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 ZYXQ15942 572 aaKnown RBP21.13■□□□□ 0.97
SHANK3-202ENST00000414786 MAP3K2Q9Y2U5 619 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 FAM13AO94988 1023 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 ANO10Q9NW15 660 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 SMARCC2Q8TAQ2 1214 aa21.13■□□□□ 0.97
SHANK3-202ENST00000414786 MYCP01106 439 aaPredicted RBP21.13■□□□□ 0.97
SHANK3-202ENST00000414786 FAM160A1Q05DH4 1040 aa21.12■□□□□ 0.97
SHANK3-202ENST00000414786 NAA25Q14CX7 972 aa21.12■□□□□ 0.97
SHANK3-202ENST00000414786 AMPD3Q01432 767 aa21.12■□□□□ 0.97
SHANK3-202ENST00000414786 PPP4R4Q6NUP7 873 aa21.12■□□□□ 0.97
SHANK3-202ENST00000414786 MX1P20591 662 aa21.12■□□□□ 0.97
SHANK3-202ENST00000414786 ZBTB16Q05516 673 aa21.12■□□□□ 0.97
SHANK3-202ENST00000414786 RPGRIP1LQ68CZ1 1315 aa21.11■□□□□ 0.97
SHANK3-202ENST00000414786 ATP6V1AP38606 617 aa21.11■□□□□ 0.97
SHANK3-202ENST00000414786 KIF1BPQ96EK5 621 aa21.11■□□□□ 0.97
SHANK3-202ENST00000414786 ZNF692Q9BU19 519 aaPredicted RBP21.11■□□□□ 0.97
SHANK3-202ENST00000414786 BACH1O14867 736 aa21.11■□□□□ 0.97
SHANK3-202ENST00000414786 TFCP2L1Q9NZI6 479 aa21.11■□□□□ 0.97
SHANK3-202ENST00000414786 NACA2Q9H009 215 aa21.11■□□□□ 0.97
SHANK3-202ENST00000414786 TTLL3Q9Y4R7 772 aa21.11■□□□□ 0.97
SHANK3-202ENST00000414786 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
SHANK3-202ENST00000414786 UBAP1LF5GYI3 381 aa21.11■□□□□ 0.97
SHANK3-202ENST00000414786 SMARCC1Q92922 1105 aaPredicted RBP21.11■□□□□ 0.97
SHANK3-202ENST00000414786 METAP2P50579 478 aaKnown RBP eCLIP21.11■□□□□ 0.97
SHANK3-202ENST00000414786 MAEAQ7L5Y9 396 aa21.1■□□□□ 0.97
SHANK3-202ENST00000414786 SORBS3O60504 671 aa21.1■□□□□ 0.97
SHANK3-202ENST00000414786 KIF5BP33176 963 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms