RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 USP19O94966 1318 aa9.36□□□□□ -0.91
LINC00343-201ENST00000414368 FAM83GA6ND36 823 aa9.36□□□□□ -0.91
LINC00343-201ENST00000414368 PER1O15534 1290 aaPredicted RBP9.36□□□□□ -0.91
LINC00343-201ENST00000414368 DDX10Q13206 875 aaKnown RBP9.36□□□□□ -0.91
LINC00343-201ENST00000414368 CNGB1Q14028 1251 aaPredicted RBP9.36□□□□□ -0.91
LINC00343-201ENST00000414368 CHRNA2Q15822 529 aa9.36□□□□□ -0.91
LINC00343-201ENST00000414368 TMEM151AQ8N4L1 468 aa9.36□□□□□ -0.91
LINC00343-201ENST00000414368 HELBQ8NG08 1087 aaPredicted RBP9.36□□□□□ -0.91
LINC00343-201ENST00000414368 C8orf37Q96NL8 207 aa9.36□□□□□ -0.91
LINC00343-201ENST00000414368 ZMYND15Q9H091 742 aa9.36□□□□□ -0.91
LINC00343-201ENST00000414368 SLC27A5Q9Y2P5 690 aa9.36□□□□□ -0.91
LINC00343-201ENST00000414368 USP31Q70CQ4 1352 aa9.36□□□□□ -0.91
LINC00343-201ENST00000414368 ZBTB7CA1YPR0 619 aa9.35□□□□□ -0.91
LINC00343-201ENST00000414368 NGLY1Q96IV0 654 aa9.35□□□□□ -0.91
LINC00343-201ENST00000414368 COG3Q96JB2 828 aa9.35□□□□□ -0.91
LINC00343-201ENST00000414368 KNSTRNQ9Y448 316 aa9.35□□□□□ -0.91
LINC00343-201ENST00000414368 KIAA0232Q92628 1395 aa9.35□□□□□ -0.91
LINC00343-201ENST00000414368 CGNL1Q0VF96 1302 aa9.34□□□□□ -0.91
LINC00343-201ENST00000414368 OVOS2A0A0J9YW53 1432 aa9.34□□□□□ -0.91
LINC00343-201ENST00000414368 OVOS2Q6IE36 1432 aa9.34□□□□□ -0.91
LINC00343-201ENST00000414368 APBB1O00213 710 aa9.34□□□□□ -0.91
LINC00343-201ENST00000414368 RAD21O60216 631 aa9.34□□□□□ -0.91
LINC00343-201ENST00000414368 GSK3AP49840 483 aa9.34□□□□□ -0.91
LINC00343-201ENST00000414368 SYMPKQ92797 1274 aaKnown RBP9.34□□□□□ -0.91
LINC00343-201ENST00000414368 RGS17Q9UGC6 210 aaPredicted RBP9.34□□□□□ -0.91
LINC00343-201ENST00000414368 USP54Q70EL1 1684 aa9.34□□□□□ -0.91
LINC00343-201ENST00000414368 SLIT3O75094 1523 aa9.34□□□□□ -0.91
LINC00343-201ENST00000414368 AFF2P51816 1311 aa9.33□□□□□ -0.92
LINC00343-201ENST00000414368 RGPD5Q99666 1765 aa9.33□□□□□ -0.92
LINC00343-201ENST00000414368 TNNT2P45379 298 aaPredicted RBP9.33□□□□□ -0.92
LINC00343-201ENST00000414368 VEGFBP49765 207 aa9.33□□□□□ -0.92
LINC00343-201ENST00000414368 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
LINC00343-201ENST00000414368 SNIP1Q8TAD8 396 aaKnown RBP9.33□□□□□ -0.92
LINC00343-201ENST00000414368 PRDM11Q9NQV5 511 aa9.33□□□□□ -0.92
LINC00343-201ENST00000414368 MAP2P11137 1827 aaKnown RBP9.33□□□□□ -0.92
LINC00343-201ENST00000414368 LTN1O94822 1766 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 NFAT5O94916 1531 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 ANKRD26Q9UPS8 1709 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 USP17L8P0C7I0 530 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 RETREG3Q86VR2 466 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 ARHGEF25Q86VW2 580 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 KCNH5Q8NCM2 988 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 PRR7Q8TB68 274 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 SNRKQ9NRH2 765 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 BTG4Q9NY30 223 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 PLCH1Q4KWH8 1693 aa9.32□□□□□ -0.92
LINC00343-201ENST00000414368 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
LINC00343-201ENST00000414368 H3BM21 787 aa9.31□□□□□ -0.92
LINC00343-201ENST00000414368 GDF11O95390 407 aa9.31□□□□□ -0.92
LINC00343-201ENST00000414368 FMNL1O95466 1100 aaPredicted RBP9.31□□□□□ -0.92
LINC00343-201ENST00000414368 RRS1Q15050 365 aaKnown RBP9.31□□□□□ -0.92
LINC00343-201ENST00000414368 MORC1Q86VD1 984 aa9.31□□□□□ -0.92
LINC00343-201ENST00000414368 SCUBE3Q8IX30 993 aa9.31□□□□□ -0.92
LINC00343-201ENST00000414368 FNBP4Q8N3X1 1017 aaPredicted RBP9.31□□□□□ -0.92
LINC00343-201ENST00000414368 PRM3Q9NNZ6 103 aa9.31□□□□□ -0.92
LINC00343-201ENST00000414368 USP21Q9UK80 565 aa9.31□□□□□ -0.92
LINC00343-201ENST00000414368 COL18A1P39060 1754 aa9.31□□□□□ -0.92
LINC00343-201ENST00000414368 COL14A1Q05707 1796 aaKnown RBP9.31□□□□□ -0.92
LINC00343-201ENST00000414368 CAMTA1Q9Y6Y1 1673 aa9.3□□□□□ -0.92
LINC00343-201ENST00000414368 BCL9LQ86UU0 1499 aa9.3□□□□□ -0.92
LINC00343-201ENST00000414368 CPDO75976 1380 aa9.3□□□□□ -0.92
LINC00343-201ENST00000414368 CFAP99D6REC4 459 aa9.3□□□□□ -0.92
LINC00343-201ENST00000414368 POTEAQ6S8J7 498 aa9.3□□□□□ -0.92
LINC00343-201ENST00000414368 SLIT2O94813 1529 aa9.3□□□□□ -0.92
LINC00343-201ENST00000414368 MAP3K19Q56UN5 1328 aa9.3□□□□□ -0.92
LINC00343-201ENST00000414368 NWD2Q9ULI1 1742 aa9.29□□□□□ -0.92
LINC00343-201ENST00000414368 RNF19BQ6ZMZ0 732 aa9.29□□□□□ -0.92
LINC00343-201ENST00000414368 UNC5CLQ8IV45 518 aa9.29□□□□□ -0.92
LINC00343-201ENST00000414368 CLUAP1Q96AJ1 413 aa9.29□□□□□ -0.92
LINC00343-201ENST00000414368 SPSB2Q99619 263 aa9.29□□□□□ -0.92
LINC00343-201ENST00000414368 USB1Q9BQ65 265 aaKnown RBP9.29□□□□□ -0.92
LINC00343-201ENST00000414368 KRTAP4-8Q9BYQ9 185 aa9.29□□□□□ -0.92
LINC00343-201ENST00000414368 QTRT2Q9H974 415 aaKnown RBP9.29□□□□□ -0.92
LINC00343-201ENST00000414368 STRN4Q9NRL3 753 aa9.29□□□□□ -0.92
LINC00343-201ENST00000414368 FCF1Q9Y324 198 aaKnown RBP9.29□□□□□ -0.92
LINC00343-201ENST00000414368 LMO7Q8WWI1 1683 aa9.29□□□□□ -0.92
LINC00343-201ENST00000414368 NRAPQ86VF7 1730 aa9.28□□□□□ -0.92
LINC00343-201ENST00000414368 NSD2O96028 1365 aa9.28□□□□□ -0.92
LINC00343-201ENST00000414368 AATKQ6ZMQ8 1374 aa9.28□□□□□ -0.92
LINC00343-201ENST00000414368 PPM1GO15355 546 aaPredicted RBP9.28□□□□□ -0.92
LINC00343-201ENST00000414368 AMPHP49418 695 aa9.28□□□□□ -0.92
LINC00343-201ENST00000414368 EVA1CP58658 441 aa9.28□□□□□ -0.92
LINC00343-201ENST00000414368 CTDSPL2Q05D32 466 aa9.28□□□□□ -0.92
LINC00343-201ENST00000414368 ZNF772Q68DY9 489 aaPredicted RBP9.28□□□□□ -0.92
LINC00343-201ENST00000414368 SALL2Q9Y467 1007 aaPredicted RBP9.28□□□□□ -0.92
LINC00343-201ENST00000414368 EMILIN1Q9Y6C2 1016 aa9.28□□□□□ -0.92
LINC00343-201ENST00000414368 PEAK1Q9H792 1746 aa9.28□□□□□ -0.92
LINC00343-201ENST00000414368 J3QL48 77 aa9.27□□□□□ -0.93
LINC00343-201ENST00000414368 RASSF7Q02833 373 aa9.27□□□□□ -0.93
LINC00343-201ENST00000414368 LARP1Q6PKG0 1096 aaKnown RBP9.27□□□□□ -0.93
LINC00343-201ENST00000414368 BRICD5Q6PL45 260 aa9.27□□□□□ -0.93
LINC00343-201ENST00000414368 MTMR14Q8NCE2 650 aa9.27□□□□□ -0.93
LINC00343-201ENST00000414368 IP6K1Q92551 441 aa9.27□□□□□ -0.93
LINC00343-201ENST00000414368 LTV1Q96GA3 475 aaPredicted RBP9.27□□□□□ -0.93
LINC00343-201ENST00000414368 POLKQ9UBT6 870 aa9.27□□□□□ -0.93
LINC00343-201ENST00000414368 CCDC9Q9Y3X0 531 aaKnown RBP9.27□□□□□ -0.93
LINC00343-201ENST00000414368 NPC1L1Q9UHC9 1359 aa9.26□□□□□ -0.93
LINC00343-201ENST00000414368 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.26□□□□□ -0.93
LINC00343-201ENST00000414368 A6NJR5 290 aa9.26□□□□□ -0.93
LINC00343-201ENST00000414368 WNT7AO00755 349 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms