RNA–Protein interactions for RNA: ENST00000414302.6

VNN3-204, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-204ENST00000414302 C1QTNF8P60827 252 aa12.71□□□□□ -0.37
VNN3-204ENST00000414302 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
VNN3-204ENST00000414302 CCDC30Q5VVM6 783 aa12.71□□□□□ -0.37
VNN3-204ENST00000414302 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
VNN3-204ENST00000414302 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.37
VNN3-204ENST00000414302 TAOK3Q9H2K8 898 aa12.71□□□□□ -0.37
VNN3-204ENST00000414302 TRMT112Q9UI30 125 aaKnown RBP12.71□□□□□ -0.37
VNN3-204ENST00000414302 IL16Q14005 1332 aa12.7□□□□□ -0.38
VNN3-204ENST00000414302 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
VNN3-204ENST00000414302 ALDH1B1P30837 517 aa12.7□□□□□ -0.38
VNN3-204ENST00000414302 TWISTNBQ3B726 338 aaPredicted RBP12.7□□□□□ -0.38
VNN3-204ENST00000414302 CRY2Q49AN0 593 aa12.7□□□□□ -0.38
VNN3-204ENST00000414302 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
VNN3-204ENST00000414302 SYNE4Q8N205 404 aa12.7□□□□□ -0.38
VNN3-204ENST00000414302 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
VNN3-204ENST00000414302 NLRP3Q96P20 1036 aa12.7□□□□□ -0.38
VNN3-204ENST00000414302 CACNA1SQ13698 1873 aa12.7□□□□□ -0.38
VNN3-204ENST00000414302 SLX4Q8IY92 1834 aa12.7□□□□□ -0.38
VNN3-204ENST00000414302 HCLS1P14317 486 aaPredicted RBP12.69□□□□□ -0.38
VNN3-204ENST00000414302 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
VNN3-204ENST00000414302 CCDC93Q567U6 631 aa12.69□□□□□ -0.38
VNN3-204ENST00000414302 RTL5Q5HYW3 569 aaPredicted RBP12.69□□□□□ -0.38
VNN3-204ENST00000414302 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
VNN3-204ENST00000414302 STK31Q9BXU1 1019 aa12.69□□□□□ -0.38
VNN3-204ENST00000414302 NMRK2Q9NPI5 230 aa12.69□□□□□ -0.38
VNN3-204ENST00000414302 RIC1Q4ADV7 1423 aa12.69□□□□□ -0.38
VNN3-204ENST00000414302 SH3TC1Q8TE82 1336 aa12.69□□□□□ -0.38
VNN3-204ENST00000414302 ANKRD36CQ5JPF3 1778 aa12.68□□□□□ -0.38
VNN3-204ENST00000414302 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
VNN3-204ENST00000414302 MYD88Q99836 296 aa12.68□□□□□ -0.38
VNN3-204ENST00000414302 ISCA1Q9BUE6 129 aa12.68□□□□□ -0.38
VNN3-204ENST00000414302 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
VNN3-204ENST00000414302 ARFGEF2Q9Y6D5 1785 aa12.68□□□□□ -0.38
VNN3-204ENST00000414302 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
VNN3-204ENST00000414302 KDM2BQ8NHM5 1336 aa12.68□□□□□ -0.38
VNN3-204ENST00000414302 KIF3CO14782 793 aa12.67□□□□□ -0.38
VNN3-204ENST00000414302 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
VNN3-204ENST00000414302 DDX58O95786 925 aaKnown RBP12.67□□□□□ -0.38
VNN3-204ENST00000414302 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
VNN3-204ENST00000414302 SLC10A5Q5PT55 438 aa12.67□□□□□ -0.38
VNN3-204ENST00000414302 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
VNN3-204ENST00000414302 FAM89AQ96GI7 184 aa12.67□□□□□ -0.38
VNN3-204ENST00000414302 SPINK5Q9NQ38 1064 aaPredicted RBP12.67□□□□□ -0.38
VNN3-204ENST00000414302 HOXA10P31260 410 aaPredicted RBP12.66□□□□□ -0.38
VNN3-204ENST00000414302 FKBP4Q02790 459 aaKnown RBP eCLIP12.66□□□□□ -0.38
VNN3-204ENST00000414302 RRAGCQ9HB90 399 aa12.66□□□□□ -0.38
VNN3-204ENST00000414302 ZNF277Q9NRM2 450 aaPredicted RBP12.66□□□□□ -0.38
VNN3-204ENST00000414302 ABCC4O15439 1325 aa12.66□□□□□ -0.38
VNN3-204ENST00000414302 LTBP3Q9NS15 1303 aa12.66□□□□□ -0.38
VNN3-204ENST00000414302 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
VNN3-204ENST00000414302 G2E3Q7L622 706 aa12.65□□□□□ -0.38
VNN3-204ENST00000414302 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
VNN3-204ENST00000414302 CRAMP1Q96RY5 1269 aa12.65□□□□□ -0.38
VNN3-204ENST00000414302 MYH16Q9H6N6 1097 aa12.65□□□□□ -0.38
VNN3-204ENST00000414302 MAP3K2Q9Y2U5 619 aa12.65□□□□□ -0.38
VNN3-204ENST00000414302 TIAM2Q8IVF5 1701 aa12.65□□□□□ -0.38
VNN3-204ENST00000414302 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.38
VNN3-204ENST00000414302 SBF1O95248 1867 aa12.65□□□□□ -0.38
VNN3-204ENST00000414302 GLTPD2A6NH11 291 aa12.64□□□□□ -0.39
VNN3-204ENST00000414302 DDX46Q7L014 1031 aaKnown RBP12.64□□□□□ -0.39
VNN3-204ENST00000414302 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
VNN3-204ENST00000414302 JARID2Q92833 1246 aaPredicted RBP12.64□□□□□ -0.39
VNN3-204ENST00000414302 TMX4Q9H1E5 349 aaPredicted RBP12.64□□□□□ -0.39
VNN3-204ENST00000414302 FER1L6Q2WGJ9 1857 aa12.64□□□□□ -0.39
VNN3-204ENST00000414302 PI4KAP2A4QPH2 592 aa12.63□□□□□ -0.39
VNN3-204ENST00000414302 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
VNN3-204ENST00000414302 VAMP4O75379 141 aa12.63□□□□□ -0.39
VNN3-204ENST00000414302 DPY19L2Q6NUT2 758 aa12.63□□□□□ -0.39
VNN3-204ENST00000414302 KSR2Q6VAB6 950 aa12.63□□□□□ -0.39
VNN3-204ENST00000414302 PI4KAP1Q8N8J0 262 aa12.63□□□□□ -0.39
VNN3-204ENST00000414302 METTL22Q9BUU2 404 aaPredicted RBP12.63□□□□□ -0.39
VNN3-204ENST00000414302 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
VNN3-204ENST00000414302 CC2D2BQ6DHV5 1058 aa12.62□□□□□ -0.39
VNN3-204ENST00000414302 ZBTB38Q8NAP3 1195 aaPredicted RBP12.62□□□□□ -0.39
VNN3-204ENST00000414302 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
VNN3-204ENST00000414302 CCER2I3L3R5 266 aa12.62□□□□□ -0.39
VNN3-204ENST00000414302 TOMM70O94826 608 aa12.62□□□□□ -0.39
VNN3-204ENST00000414302 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
VNN3-204ENST00000414302 NEXNQ0ZGT2 675 aa12.62□□□□□ -0.39
VNN3-204ENST00000414302 FLIIQ13045 1269 aa12.62□□□□□ -0.39
VNN3-204ENST00000414302 FKBP5Q13451 457 aaPredicted RBP12.62□□□□□ -0.39
VNN3-204ENST00000414302 GRAPQ13588 217 aa12.62□□□□□ -0.39
VNN3-204ENST00000414302 CCDC191Q8NCU4 936 aa12.62□□□□□ -0.39
VNN3-204ENST00000414302 GRAPLQ8TC17 118 aaPredicted RBP12.62□□□□□ -0.39
VNN3-204ENST00000414302 ATP6V0A2Q9Y487 856 aa12.62□□□□□ -0.39
VNN3-204ENST00000414302 LAMB2P55268 1798 aa12.61□□□□□ -0.39
VNN3-204ENST00000414302 BBOX1O75936 387 aa12.61□□□□□ -0.39
VNN3-204ENST00000414302 DDNO94850 711 aaPredicted RBP12.61□□□□□ -0.39
VNN3-204ENST00000414302 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
VNN3-204ENST00000414302 CWF19L2Q2TBE0 894 aaKnown RBP12.61□□□□□ -0.39
VNN3-204ENST00000414302 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
VNN3-204ENST00000414302 PSMD1Q99460 953 aa12.61□□□□□ -0.39
VNN3-204ENST00000414302 SNED1Q8TER0 1413 aa12.6□□□□□ -0.39
VNN3-204ENST00000414302 DDX60Q8IY21 1712 aaKnown RBP12.6□□□□□ -0.39
VNN3-204ENST00000414302 ZNF521Q96K83 1311 aa12.6□□□□□ -0.39
VNN3-204ENST00000414302 ZNF541Q9H0D2 1346 aa12.6□□□□□ -0.39
VNN3-204ENST00000414302 PCCAP05165 728 aaPredicted RBP12.6□□□□□ -0.39
VNN3-204ENST00000414302 VEGFAP15692 232 aaPredicted RBP12.6□□□□□ -0.39
VNN3-204ENST00000414302 SF3B3Q15393 1217 aaKnown RBP12.6□□□□□ -0.39
VNN3-204ENST00000414302 CCDC88AQ3V6T2 1871 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms