RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 N4BP2Q86UW6 1770 aaPredicted RBP18.81■□□□□ 0.6
CHD1-202ENST00000414220 SH3TC1Q8TE82 1336 aa18.8■□□□□ 0.6
CHD1-202ENST00000414220 KLRG2A4D1S0 409 aaPredicted RBP18.8■□□□□ 0.6
CHD1-202ENST00000414220 TRIM28Q13263 835 aaKnown RBP18.8■□□□□ 0.6
CHD1-202ENST00000414220 SOGA3Q5TF21 947 aa18.8■□□□□ 0.6
CHD1-202ENST00000414220 ISCA1Q9BUE6 129 aa18.8■□□□□ 0.6
CHD1-202ENST00000414220 ATP5J2-PTCD1G3V325 749 aa18.79■□□□□ 0.6
CHD1-202ENST00000414220 FKBP5Q13451 457 aaPredicted RBP18.79■□□□□ 0.6
CHD1-202ENST00000414220 ZNF428Q96B54 188 aa18.79■□□□□ 0.6
CHD1-202ENST00000414220 MYD88Q99836 296 aa18.79■□□□□ 0.6
CHD1-202ENST00000414220 METTL22Q9BUU2 404 aaPredicted RBP18.79■□□□□ 0.6
CHD1-202ENST00000414220 MAP3K2Q9Y2U5 619 aa18.79■□□□□ 0.6
CHD1-202ENST00000414220 PI4KAP2A4QPH2 592 aa18.78■□□□□ 0.6
CHD1-202ENST00000414220 FLIIQ13045 1269 aa18.78■□□□□ 0.6
CHD1-202ENST00000414220 SLC10A5Q5PT55 438 aa18.78■□□□□ 0.6
CHD1-202ENST00000414220 PI4KAP1Q8N8J0 262 aa18.78■□□□□ 0.6
CHD1-202ENST00000414220 CCDC191Q8NCU4 936 aa18.78■□□□□ 0.6
CHD1-202ENST00000414220 RBM17Q96I25 401 aaKnown RBP18.78■□□□□ 0.6
CHD1-202ENST00000414220 TMX4Q9H1E5 349 aaPredicted RBP18.78■□□□□ 0.6
CHD1-202ENST00000414220 HNRNPUQ00839 825 aaKnown RBP eCLIP18.77■□□□□ 0.6
CHD1-202ENST00000414220 CWC25Q9NXE8 425 aaPredicted RBP18.77■□□□□ 0.6
CHD1-202ENST00000414220 RIC1Q4ADV7 1423 aa18.76■□□□□ 0.59
CHD1-202ENST00000414220 CT47B1P0C2W7 299 aaPredicted RBP18.76■□□□□ 0.59
CHD1-202ENST00000414220 KIAA1551Q9HCM1 1747 aa18.76■□□□□ 0.59
CHD1-202ENST00000414220 CRY2Q49AN0 593 aa18.75■□□□□ 0.59
CHD1-202ENST00000414220 PRPF40BQ6NWY9 871 aaKnown RBP18.75■□□□□ 0.59
CHD1-202ENST00000414220 ABCC12Q96J65 1359 aa18.74■□□□□ 0.59
CHD1-202ENST00000414220 C21orf2O43822 256 aa18.74■□□□□ 0.59
CHD1-202ENST00000414220 G2E3Q7L622 706 aa18.74■□□□□ 0.59
CHD1-202ENST00000414220 ZBTB38Q8NAP3 1195 aaPredicted RBP18.74■□□□□ 0.59
CHD1-202ENST00000414220 CDCA7LQ96GN5 454 aa18.74■□□□□ 0.59
CHD1-202ENST00000414220 ZNF219Q9P2Y4 722 aaPredicted RBP18.74■□□□□ 0.59
CHD1-202ENST00000414220 HOXA10P31260 410 aaPredicted RBP18.73■□□□□ 0.59
CHD1-202ENST00000414220 CC2D2BQ6DHV5 1058 aa18.73■□□□□ 0.59
CHD1-202ENST00000414220 DNAAF4Q8WXU2 420 aa18.73■□□□□ 0.59
CHD1-202ENST00000414220 FAM89AQ96GI7 184 aa18.73■□□□□ 0.59
CHD1-202ENST00000414220 CRAMP1Q96RY5 1269 aa18.73■□□□□ 0.59
CHD1-202ENST00000414220 IRS4O14654 1257 aaPredicted RBP18.72■□□□□ 0.59
CHD1-202ENST00000414220 HCLS1P14317 486 aaPredicted RBP18.72■□□□□ 0.59
CHD1-202ENST00000414220 GRIPAP1Q4V328 841 aa18.72■□□□□ 0.59
CHD1-202ENST00000414220 CCDC93Q567U6 631 aa18.72■□□□□ 0.59
CHD1-202ENST00000414220 DDX46Q7L014 1031 aaKnown RBP18.72■□□□□ 0.59
CHD1-202ENST00000414220 TRMT2AQ8IZ69 625 aaKnown RBP18.72■□□□□ 0.59
CHD1-202ENST00000414220 CHD4Q14839 1912 aa18.72■□□□□ 0.59
CHD1-202ENST00000414220 PCCAP05165 728 aaPredicted RBP18.71■□□□□ 0.59
CHD1-202ENST00000414220 ALDH1L2Q3SY69 923 aa18.71■□□□□ 0.59
CHD1-202ENST00000414220 RTKN2Q8IZC4 609 aa18.71■□□□□ 0.59
CHD1-202ENST00000414220 ANKRD31Q8N7Z5 1873 aa18.71■□□□□ 0.59
CHD1-202ENST00000414220 LMNB1P20700 586 aa18.7■□□□□ 0.58
CHD1-202ENST00000414220 BRCA1P38398 1863 aaKnown RBP18.7■□□□□ 0.58
CHD1-202ENST00000414220 RTL5Q5HYW3 569 aaPredicted RBP18.7■□□□□ 0.58
CHD1-202ENST00000414220 LINS1Q8NG48 757 aa18.7■□□□□ 0.58
CHD1-202ENST00000414220 ANKRD36CQ5JPF3 1778 aa18.7■□□□□ 0.58
CHD1-202ENST00000414220 ADCY9O60503 1353 aa18.69■□□□□ 0.58
CHD1-202ENST00000414220 DLEC1Q9Y238 1755 aa18.69■□□□□ 0.58
CHD1-202ENST00000414220 BBOX1O75936 387 aa18.69■□□□□ 0.58
CHD1-202ENST00000414220 C9orf131Q5VYM1 1079 aa18.69■□□□□ 0.58
CHD1-202ENST00000414220 TAOK3Q9H2K8 898 aa18.69■□□□□ 0.58
CHD1-202ENST00000414220 ARFGEF1Q9Y6D6 1849 aa18.69■□□□□ 0.58
CHD1-202ENST00000414220 NEURL1BA8MQ27 555 aa18.68■□□□□ 0.58
CHD1-202ENST00000414220 PPEF1O14829 653 aaPredicted RBP18.68■□□□□ 0.58
CHD1-202ENST00000414220 SF3B3Q15393 1217 aaKnown RBP18.68■□□□□ 0.58
CHD1-202ENST00000414220 TMC4Q7Z404 712 aa18.68■□□□□ 0.58
CHD1-202ENST00000414220 SYNE4Q8N205 404 aa18.68■□□□□ 0.58
CHD1-202ENST00000414220 RNF181Q9P0P0 153 aa18.68■□□□□ 0.58
CHD1-202ENST00000414220 PTPRCP08575 1304 aa18.68■□□□□ 0.58
CHD1-202ENST00000414220 CACNA1FO60840 1977 aa18.68■□□□□ 0.58
CHD1-202ENST00000414220 PDE8AO60658 829 aa18.67■□□□□ 0.58
CHD1-202ENST00000414220 IGKV5-2P06315 115 aa18.67■□□□□ 0.58
CHD1-202ENST00000414220 MRPL50Q8N5N7 158 aaKnown RBP18.67■□□□□ 0.58
CHD1-202ENST00000414220 SMC4Q9NTJ3 1288 aa18.67■□□□□ 0.58
CHD1-202ENST00000414220 ARFGEF2Q9Y6D5 1785 aa18.67■□□□□ 0.58
CHD1-202ENST00000414220 GCKRQ14397 625 aa18.66■□□□□ 0.58
CHD1-202ENST00000414220 CWF19L2Q2TBE0 894 aaKnown RBP18.66■□□□□ 0.58
CHD1-202ENST00000414220 CCDC152Q4G0S7 254 aa18.66■□□□□ 0.58
CHD1-202ENST00000414220 SLC4A10Q6U841 1118 aa18.66■□□□□ 0.58
CHD1-202ENST00000414220 C3orf67Q6ZVT6 689 aa18.66■□□□□ 0.58
CHD1-202ENST00000414220 ZNF784Q8NCA9 323 aaPredicted RBP18.66■□□□□ 0.58
CHD1-202ENST00000414220 SSH1Q8WYL5 1049 aa18.66■□□□□ 0.58
CHD1-202ENST00000414220 CDHR2Q9BYE9 1310 aa18.66■□□□□ 0.58
CHD1-202ENST00000414220 RASSF7Q02833 373 aa18.65■□□□□ 0.58
CHD1-202ENST00000414220 GRAPQ13588 217 aa18.65■□□□□ 0.58
CHD1-202ENST00000414220 GRAPLQ8TC17 118 aaPredicted RBP18.65■□□□□ 0.58
CHD1-202ENST00000414220 C7orf43Q8WVR3 580 aa18.65■□□□□ 0.58
CHD1-202ENST00000414220 LTBP3Q9NS15 1303 aa18.65■□□□□ 0.58
CHD1-202ENST00000414220 ZC3H4Q9UPT8 1303 aaKnown RBP18.65■□□□□ 0.58
CHD1-202ENST00000414220 COL11A2P13942 1736 aaPredicted RBP18.64■□□□□ 0.57
CHD1-202ENST00000414220 F6X3S4 739 aa18.64■□□□□ 0.57
CHD1-202ENST00000414220 FKBP4Q02790 459 aaKnown RBP eCLIP18.64■□□□□ 0.57
CHD1-202ENST00000414220 SRCIN1Q9C0H9 1055 aa18.64■□□□□ 0.57
CHD1-202ENST00000414220 GPBP1L1Q9HC44 474 aaPredicted RBP18.64■□□□□ 0.57
CHD1-202ENST00000414220 ABCC4O15439 1325 aa18.64■□□□□ 0.57
CHD1-202ENST00000414220 ZBED9Q6R2W3 1325 aa18.64■□□□□ 0.57
CHD1-202ENST00000414220 H7C1W4 665 aa18.63■□□□□ 0.57
CHD1-202ENST00000414220 NFKBIEO00221 500 aa18.63■□□□□ 0.57
CHD1-202ENST00000414220 ALDH1L1O75891 902 aa18.63■□□□□ 0.57
CHD1-202ENST00000414220 C9orf78Q9NZ63 289 aaPredicted RBP18.63■□□□□ 0.57
CHD1-202ENST00000414220 ATP6V0A2Q9Y487 856 aa18.63■□□□□ 0.57
CHD1-202ENST00000414220 GOLGB1Q14789 3259 aaKnown RBP18.62■□□□□ 0.57
CHD1-202ENST00000414220 BEND3Q5T5X7 828 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms