RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 RBM17Q96I25 401 aaKnown RBP21.85■■□□□ 1.09
COL6A2-205ENST00000413758 FKBP4Q02790 459 aaKnown RBP eCLIP21.84■■□□□ 1.09
COL6A2-205ENST00000413758 FSTL1Q12841 308 aa21.84■■□□□ 1.09
COL6A2-205ENST00000413758 CRY2Q49AN0 593 aa21.84■■□□□ 1.09
COL6A2-205ENST00000413758 DUSP27Q5VZP5 1158 aa21.84■■□□□ 1.09
COL6A2-205ENST00000413758 MBIPQ9NS73 344 aa21.84■■□□□ 1.09
COL6A2-205ENST00000413758 DICER1Q9UPY3 1922 aaKnown RBP21.84■■□□□ 1.09
COL6A2-205ENST00000413758 TCERG1O14776 1098 aaKnown RBP21.83■■□□□ 1.09
COL6A2-205ENST00000413758 HOXB7P09629 217 aa21.83■■□□□ 1.09
COL6A2-205ENST00000413758 SMC1BQ8NDV3 1235 aa21.83■■□□□ 1.09
COL6A2-205ENST00000413758 NLRP3Q96P20 1036 aa21.83■■□□□ 1.09
COL6A2-205ENST00000413758 ZNF277Q9NRM2 450 aaPredicted RBP21.83■■□□□ 1.09
COL6A2-205ENST00000413758 GNAI1P63096 354 aa21.82■■□□□ 1.08
COL6A2-205ENST00000413758 DBF4Q9UBU7 674 aaPredicted RBP21.82■■□□□ 1.08
COL6A2-205ENST00000413758 ZNF316A6NFI3 1004 aaPredicted RBP21.81■■□□□ 1.08
COL6A2-205ENST00000413758 TCIRG1Q13488 830 aa21.81■■□□□ 1.08
COL6A2-205ENST00000413758 IFT57Q9NWB7 429 aa21.81■■□□□ 1.08
COL6A2-205ENST00000413758 RIC1Q4ADV7 1423 aa21.8■■□□□ 1.08
COL6A2-205ENST00000413758 DDNO94850 711 aaPredicted RBP21.8■■□□□ 1.08
COL6A2-205ENST00000413758 HOXA10P31260 410 aaPredicted RBP21.8■■□□□ 1.08
COL6A2-205ENST00000413758 CCDC184Q52MB2 194 aa21.8■■□□□ 1.08
COL6A2-205ENST00000413758 C3orf67Q6ZVT6 689 aa21.8■■□□□ 1.08
COL6A2-205ENST00000413758 SYNE4Q8N205 404 aa21.8■■□□□ 1.08
COL6A2-205ENST00000413758 ZNF428Q96B54 188 aa21.8■■□□□ 1.08
COL6A2-205ENST00000413758 TMX4Q9H1E5 349 aaPredicted RBP21.8■■□□□ 1.08
COL6A2-205ENST00000413758 TRMT112Q9UI30 125 aaKnown RBP21.8■■□□□ 1.08
COL6A2-205ENST00000413758 ELL2O00472 640 aaPredicted RBP21.79■■□□□ 1.08
COL6A2-205ENST00000413758 PPEF1O14829 653 aaPredicted RBP21.79■■□□□ 1.08
COL6A2-205ENST00000413758 ANP32CO43423 234 aa21.79■■□□□ 1.08
COL6A2-205ENST00000413758 CC2D2BQ6DHV5 1058 aa21.79■■□□□ 1.08
COL6A2-205ENST00000413758 NLRP10Q86W26 655 aa21.79■■□□□ 1.08
COL6A2-205ENST00000413758 CRAMP1Q96RY5 1269 aa21.79■■□□□ 1.08
COL6A2-205ENST00000413758 HYPKQ9NX55 129 aa21.79■■□□□ 1.08
COL6A2-205ENST00000413758 ANKRD13DQ6ZTN6 518 aa21.78■■□□□ 1.08
COL6A2-205ENST00000413758 PLBD2Q8NHP8 589 aa21.78■■□□□ 1.08
COL6A2-205ENST00000413758 RNF123Q5XPI4 1314 aa21.78■■□□□ 1.08
COL6A2-205ENST00000413758 ANKRD36CQ5JPF3 1778 aa21.77■■□□□ 1.08
COL6A2-205ENST00000413758 ZNF853P0CG23 659 aa21.77■■□□□ 1.08
COL6A2-205ENST00000413758 HCLS1P14317 486 aaPredicted RBP21.77■■□□□ 1.08
COL6A2-205ENST00000413758 IARSP41252 1262 aaKnown RBP21.77■■□□□ 1.08
COL6A2-205ENST00000413758 SLC10A5Q5PT55 438 aa21.77■■□□□ 1.08
COL6A2-205ENST00000413758 WDR90Q96KV7 1748 aa21.77■■□□□ 1.08
COL6A2-205ENST00000413758 POTECB2RU33 542 aa21.76■■□□□ 1.07
COL6A2-205ENST00000413758 JDP2Q8WYK2 163 aa21.76■■□□□ 1.07
COL6A2-205ENST00000413758 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
COL6A2-205ENST00000413758 SH3TC1Q8TE82 1336 aa21.76■■□□□ 1.07
COL6A2-205ENST00000413758 PSMD1Q99460 953 aa21.75■■□□□ 1.07
COL6A2-205ENST00000413758 ATP5J2-PTCD1G3V325 749 aa21.74■■□□□ 1.07
COL6A2-205ENST00000413758 HTRA3P83110 453 aa21.74■■□□□ 1.07
COL6A2-205ENST00000413758 GOLGA2Q08379 1002 aa21.74■■□□□ 1.07
COL6A2-205ENST00000413758 GRIPAP1Q4V328 841 aa21.74■■□□□ 1.07
COL6A2-205ENST00000413758 RIC3Q7Z5B4 369 aa21.74■■□□□ 1.07
COL6A2-205ENST00000413758 ZNF541Q9H0D2 1346 aa21.74■■□□□ 1.07
COL6A2-205ENST00000413758 IQCA1LA6NCM1 817 aa21.73■■□□□ 1.07
COL6A2-205ENST00000413758 DDX46Q7L014 1031 aaKnown RBP21.73■■□□□ 1.07
COL6A2-205ENST00000413758 CEP350Q5VT06 3117 aa21.73■■□□□ 1.07
COL6A2-205ENST00000413758 LARGE2Q8N3Y3 721 aa21.72■■□□□ 1.07
COL6A2-205ENST00000413758 C8orf58Q8NAV2 365 aa21.72■■□□□ 1.07
COL6A2-205ENST00000413758 ABCC4O15439 1325 aa21.72■■□□□ 1.07
COL6A2-205ENST00000413758 SLC51AQ86UW1 340 aa21.71■■□□□ 1.07
COL6A2-205ENST00000413758 CHMP4AQ9BY43 222 aa21.71■■□□□ 1.07
COL6A2-205ENST00000413758 EIF6P56537 245 aaKnown RBP21.7■■□□□ 1.06
COL6A2-205ENST00000413758 RTL5Q5HYW3 569 aaPredicted RBP21.7■■□□□ 1.06
COL6A2-205ENST00000413758 FAM89AQ96GI7 184 aa21.7■■□□□ 1.06
COL6A2-205ENST00000413758 ISCA1Q9BUE6 129 aa21.7■■□□□ 1.06
COL6A2-205ENST00000413758 PHAXQ9H814 394 aaKnown RBP21.7■■□□□ 1.06
COL6A2-205ENST00000413758 ATP6V0A2Q9Y487 856 aa21.7■■□□□ 1.06
COL6A2-205ENST00000413758 FZD9O00144 591 aa21.69■■□□□ 1.06
COL6A2-205ENST00000413758 BBOX1O75936 387 aa21.69■■□□□ 1.06
COL6A2-205ENST00000413758 EAPPQ56P03 285 aaPredicted RBP21.69■■□□□ 1.06
COL6A2-205ENST00000413758 CCDC30Q5VVM6 783 aa21.69■■□□□ 1.06
COL6A2-205ENST00000413758 CHADLQ6NUI6 762 aa21.69■■□□□ 1.06
COL6A2-205ENST00000413758 TSR2Q969E8 191 aaKnown RBP21.69■■□□□ 1.06
COL6A2-205ENST00000413758 L3MBTL3Q96JM7 780 aaPredicted RBP21.69■■□□□ 1.06
COL6A2-205ENST00000413758 GJA3Q9Y6H8 435 aa21.69■■□□□ 1.06
COL6A2-205ENST00000413758 PPIP5K2O43314 1243 aa21.68■■□□□ 1.06
COL6A2-205ENST00000413758 NIM1KQ8IY84 436 aa21.68■■□□□ 1.06
COL6A2-205ENST00000413758 DNAJC5GQ8N7S2 189 aa21.68■■□□□ 1.06
COL6A2-205ENST00000413758 HACL1Q9UJ83 578 aa21.68■■□□□ 1.06
COL6A2-205ENST00000413758 SALL2Q9Y467 1007 aaPredicted RBP21.68■■□□□ 1.06
COL6A2-205ENST00000413758 LAMB2P55268 1798 aa21.68■■□□□ 1.06
COL6A2-205ENST00000413758 SNED1Q8TER0 1413 aa21.67■■□□□ 1.06
COL6A2-205ENST00000413758 DDX58O95786 925 aaKnown RBP21.67■■□□□ 1.06
COL6A2-205ENST00000413758 POTEIP0CG38 1075 aa21.67■■□□□ 1.06
COL6A2-205ENST00000413758 POTEJP0CG39 1038 aa21.67■■□□□ 1.06
COL6A2-205ENST00000413758 GRAPQ13588 217 aa21.67■■□□□ 1.06
COL6A2-205ENST00000413758 DPP8Q6V1X1 898 aaPredicted RBP21.67■■□□□ 1.06
COL6A2-205ENST00000413758 WWC1Q8IX03 1113 aa21.67■■□□□ 1.06
COL6A2-205ENST00000413758 SUPT20HQ8NEM7 779 aa21.67■■□□□ 1.06
COL6A2-205ENST00000413758 GRAPLQ8TC17 118 aaPredicted RBP21.67■■□□□ 1.06
COL6A2-205ENST00000413758 MYD88Q99836 296 aa21.67■■□□□ 1.06
COL6A2-205ENST00000413758 TAF1DQ9H5J8 278 aaPredicted RBP21.67■■□□□ 1.06
COL6A2-205ENST00000413758 CLEC11AQ9Y240 323 aa21.67■■□□□ 1.06
COL6A2-205ENST00000413758 CCDC27Q2M243 656 aa21.66■■□□□ 1.06
COL6A2-205ENST00000413758 SP8Q8IXZ3 490 aa21.66■■□□□ 1.06
COL6A2-205ENST00000413758 GPC2Q8N158 579 aa21.66■■□□□ 1.06
COL6A2-205ENST00000413758 TSPYL6Q8N831 410 aa21.66■■□□□ 1.06
COL6A2-205ENST00000413758 AOC3Q16853 763 aa21.65■■□□□ 1.06
COL6A2-205ENST00000413758 MPNDQ8N594 471 aa21.65■■□□□ 1.06
COL6A2-205ENST00000413758 KLRG1Q96E93 195 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms