RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	GPT	P24298	496 aa		13.09	□□□□□ -0.31
ZNF3-205	ENST00000413658	TRIM28	Q13263	835 aa	Known RBP	13.09	□□□□□ -0.31
ZNF3-205	ENST00000413658	HSP90AB3P	Q58FF7	597 aa		13.09	□□□□□ -0.31
ZNF3-205	ENST00000413658	BICDL1	Q6ZP65	573 aa		13.09	□□□□□ -0.31
ZNF3-205	ENST00000413658	DNAAF4	Q8WXU2	420 aa		13.09	□□□□□ -0.31
ZNF3-205	ENST00000413658	ARHGAP45	Q92619	1136 aa		13.09	□□□□□ -0.31
ZNF3-205	ENST00000413658	ANP32E	Q9BTT0	268 aa		13.09	□□□□□ -0.31
ZNF3-205	ENST00000413658	SPON1	Q9HCB6	807 aa		13.09	□□□□□ -0.31
ZNF3-205	ENST00000413658	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
ZNF3-205	ENST00000413658	PXDNL	A1KZ92	1463 aa		13.09	□□□□□ -0.31
ZNF3-205	ENST00000413658	ATP5J2-PTCD1	G3V325	749 aa		13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	EIF5B	O60841	1220 aa	Known RBP	13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	TRIM27	P14373	513 aa		13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	NLRP10	Q86W26	655 aa		13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	DDX60	Q8IY21	1712 aa	Known RBP	13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	SETDB2	Q96T68	719 aa		13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	MYD88	Q99836	296 aa		13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	KIAA1551	Q9HCM1	1747 aa		13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	TNN	Q9UQP3	1299 aa		13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	LAMB2	P55268	1798 aa		13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.08	□□□□□ -0.32
ZNF3-205	ENST00000413658	BEND3	Q5T5X7	828 aa		13.07	□□□□□ -0.32
ZNF3-205	ENST00000413658	SUSD4	Q5VX71	490 aa		13.07	□□□□□ -0.32
ZNF3-205	ENST00000413658	NEURL1B	A8MQ27	555 aa		13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	NTSR2	O95665	410 aa		13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	SERPINB2	P05120	415 aa		13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	CWF19L2	Q2TBE0	894 aa	Known RBP	13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	PARP10	Q53GL7	1025 aa		13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	ATF7IP	Q6VMQ6	1270 aa		13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	FRAT1	Q92837	279 aa	Predicted RBP	13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	API5	Q9BZZ5	524 aa	Known RBP	13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	GOLGB1	Q14789	3259 aa	Known RBP	13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	MYH3	P11055	1940 aa		13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	ABCC4	O15439	1325 aa		13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.06	□□□□□ -0.32
ZNF3-205	ENST00000413658	IPO8	O15397	1037 aa	Known RBP	13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	ZKSCAN2	Q63HK3	967 aa		13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	CCDC191	Q8NCU4	936 aa		13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	LINS1	Q8NG48	757 aa		13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	PARP3	Q9Y6F1	533 aa		13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	C10orf71	Q711Q0	1435 aa		13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	COL11A2	P13942	1736 aa	Predicted RBP	13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	DLEC1	Q9Y238	1755 aa		13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	POLD1	P28340	1107 aa		13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	NEXN	Q0ZGT2	675 aa		13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	PRR5L	Q6MZQ0	368 aa		13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	SYNE4	Q8N205	404 aa		13.05	□□□□□ -0.32
ZNF3-205	ENST00000413658	BRCA1	P38398	1863 aa	Known RBP	13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	FAM177B	A6PVY3	158 aa		13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	PLIN1	O60240	522 aa		13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	RLBP1	P12271	317 aa		13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	GCKR	Q14397	625 aa		13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	SLC4A10	Q6U841	1118 aa		13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	UTP14A	Q9BVJ6	771 aa	Known RBP	13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	CWC25	Q9NXE8	425 aa	Predicted RBP	13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	SSUH2	Q9Y2M2	353 aa		13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	RNF123	Q5XPI4	1314 aa		13.04	□□□□□ -0.32
ZNF3-205	ENST00000413658	ABCC12	Q96J65	1359 aa		13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658	RIC1	Q4ADV7	1423 aa		13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658	ALDH1L1	O75891	902 aa		13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658	CASP7	P55210	303 aa		13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658	ERFE	Q4G0M1	354 aa		13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658	INTS3	Q68E01	1043 aa	Known RBP	13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658	PPP1R42	Q7Z4L9	355 aa		13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658	NUTM1	Q86Y26	1132 aa		13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658	CNBD1	Q8NA66	436 aa		13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658	SRCIN1	Q9C0H9	1055 aa		13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658	NYX	Q9GZU5	481 aa		13.03	□□□□□ -0.32
ZNF3-205	ENST00000413658		H7C1W4	665 aa		13.02	□□□□□ -0.33
ZNF3-205	ENST00000413658	PCCA	P05165	728 aa	Predicted RBP	13.02	□□□□□ -0.33
ZNF3-205	ENST00000413658	TPTE2	Q6XPS3	522 aa		13.02	□□□□□ -0.33
ZNF3-205	ENST00000413658	CCDC24	Q8N4L8	307 aa		13.02	□□□□□ -0.33
ZNF3-205	ENST00000413658	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.02	□□□□□ -0.33
ZNF3-205	ENST00000413658	CLUAP1	Q96AJ1	413 aa		13.02	□□□□□ -0.33
ZNF3-205	ENST00000413658	FAM89A	Q96GI7	184 aa		13.02	□□□□□ -0.33
ZNF3-205	ENST00000413658	TRMT112	Q9UI30	125 aa	Known RBP	13.02	□□□□□ -0.33
ZNF3-205	ENST00000413658	CCT4	P50991	539 aa	Known RBP	13.01	□□□□□ -0.33
ZNF3-205	ENST00000413658	SLC10A5	Q5PT55	438 aa		13.01	□□□□□ -0.33
ZNF3-205	ENST00000413658	C20orf194	Q5TEA3	1177 aa		13.01	□□□□□ -0.33
ZNF3-205	ENST00000413658	DZIP1L	Q8IYY4	767 aa	Known RBP	13.01	□□□□□ -0.33
ZNF3-205	ENST00000413658	UTY	O14607	1347 aa		13.01	□□□□□ -0.33
ZNF3-205	ENST00000413658	TAF1	P21675	1872 aa		13.01	□□□□□ -0.33
ZNF3-205	ENST00000413658	SH3TC1	Q8TE82	1336 aa		13	□□□□□ -0.33
ZNF3-205	ENST00000413658	RRP1	P56182	461 aa	Known RBP	13	□□□□□ -0.33
ZNF3-205	ENST00000413658	TMEM57	Q8N5G2	664 aa		13	□□□□□ -0.33
ZNF3-205	ENST00000413658	PANK1	Q8TE04	598 aa		13	□□□□□ -0.33
ZNF3-205	ENST00000413658	JARID2	Q92833	1246 aa	Predicted RBP	13	□□□□□ -0.33
ZNF3-205	ENST00000413658	USP44	Q9H0E7	712 aa		13	□□□□□ -0.33
ZNF3-205	ENST00000413658	GTF3C3	Q9Y5Q9	886 aa		13	□□□□□ -0.33
ZNF3-205	ENST00000413658	CACNA1S	Q13698	1873 aa		13	□□□□□ -0.33
ZNF3-205	ENST00000413658	CDHR2	Q9BYE9	1310 aa		12.99	□□□□□ -0.33
ZNF3-205	ENST00000413658	KLRG2	A4D1S0	409 aa	Predicted RBP	12.99	□□□□□ -0.33
ZNF3-205	ENST00000413658	GRM8	O00222	908 aa		12.99	□□□□□ -0.33
ZNF3-205	ENST00000413658	ST5	P78524	1137 aa		12.99	□□□□□ -0.33
ZNF3-205	ENST00000413658	RTL5	Q5HYW3	569 aa	Predicted RBP	12.99	□□□□□ -0.33
ZNF3-205	ENST00000413658	C3orf67	Q6ZVT6	689 aa		12.99	□□□□□ -0.33
ZNF3-205	ENST00000413658	UBE3B	Q7Z3V4	1068 aa		12.99	□□□□□ -0.33
ZNF3-205	ENST00000413658	BRIP1	Q9BX63	1249 aa		12.99	□□□□□ -0.33
ZNF3-205	ENST00000413658	CD2AP	Q9Y5K6	639 aa		12.99	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms