RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 STYK1Q6J9G0 422 aa12.95□□□□□ -0.34
TMEM248-202ENST00000413593 ARHGAP27Q6ZUM4 889 aa12.95□□□□□ -0.34
TMEM248-202ENST00000413593 RIC3Q7Z5B4 369 aa12.95□□□□□ -0.34
TMEM248-202ENST00000413593 MASTLQ96GX5 879 aa12.95□□□□□ -0.34
TMEM248-202ENST00000413593 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
TMEM248-202ENST00000413593 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
TMEM248-202ENST00000413593 NUP98P52948 1817 aa12.95□□□□□ -0.34
TMEM248-202ENST00000413593 GOLGB1Q14789 3259 aaKnown RBP12.94□□□□□ -0.34
TMEM248-202ENST00000413593 RNF123Q5XPI4 1314 aa12.94□□□□□ -0.34
TMEM248-202ENST00000413593 BRCA1P38398 1863 aaKnown RBP12.94□□□□□ -0.34
TMEM248-202ENST00000413593 E9PSI1 815 aa12.94□□□□□ -0.34
TMEM248-202ENST00000413593 DDX58O95786 925 aaKnown RBP12.94□□□□□ -0.34
TMEM248-202ENST00000413593 NPR1P16066 1061 aa12.94□□□□□ -0.34
TMEM248-202ENST00000413593 CRY2Q49AN0 593 aa12.94□□□□□ -0.34
TMEM248-202ENST00000413593 CNKSR1Q969H4 720 aa12.94□□□□□ -0.34
TMEM248-202ENST00000413593 UTRNP46939 3433 aa12.94□□□□□ -0.34
TMEM248-202ENST00000413593 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
TMEM248-202ENST00000413593 SLFN5Q08AF3 891 aa12.93□□□□□ -0.34
TMEM248-202ENST00000413593 TRIM28Q13263 835 aaKnown RBP12.93□□□□□ -0.34
TMEM248-202ENST00000413593 SLC10A5Q5PT55 438 aa12.93□□□□□ -0.34
TMEM248-202ENST00000413593 G2E3Q7L622 706 aa12.93□□□□□ -0.34
TMEM248-202ENST00000413593 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
TMEM248-202ENST00000413593 TRMT112Q9UI30 125 aaKnown RBP12.93□□□□□ -0.34
TMEM248-202ENST00000413593 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
TMEM248-202ENST00000413593 SH3TC1Q8TE82 1336 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 DLEC1Q9Y238 1755 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 FLIIQ13045 1269 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 PRPF40BQ6NWY9 871 aaKnown RBP12.92□□□□□ -0.34
TMEM248-202ENST00000413593 KSR2Q6VAB6 950 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 C3orf67Q6ZVT6 689 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 ZNF428Q96B54 188 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 CDCA7LQ96GN5 454 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 MYD88Q99836 296 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 METTL22Q9BUU2 404 aaPredicted RBP12.92□□□□□ -0.34
TMEM248-202ENST00000413593 MAP3K2Q9Y2U5 619 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 ADCY9O60503 1353 aa12.92□□□□□ -0.34
TMEM248-202ENST00000413593 PI4KAP2A4QPH2 592 aa12.91□□□□□ -0.34
TMEM248-202ENST00000413593 C21orf2O43822 256 aa12.91□□□□□ -0.34
TMEM248-202ENST00000413593 HOXA10P31260 410 aaPredicted RBP12.91□□□□□ -0.34
TMEM248-202ENST00000413593 PI4KAP1Q8N8J0 262 aa12.91□□□□□ -0.34
TMEM248-202ENST00000413593 ZNF784Q8NCA9 323 aaPredicted RBP12.91□□□□□ -0.34
TMEM248-202ENST00000413593 NLRP3Q96P20 1036 aa12.91□□□□□ -0.34
TMEM248-202ENST00000413593 TNRC6CQ9HCJ0 1690 aaKnown RBP12.91□□□□□ -0.34
TMEM248-202ENST00000413593 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.34
TMEM248-202ENST00000413593 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
TMEM248-202ENST00000413593 RPGRQ92834 1020 aaKnown RBP12.9□□□□□ -0.34
TMEM248-202ENST00000413593 FAM89AQ96GI7 184 aa12.9□□□□□ -0.34
TMEM248-202ENST00000413593 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
TMEM248-202ENST00000413593 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
TMEM248-202ENST00000413593 NFKBIEO00221 500 aa12.89□□□□□ -0.35
TMEM248-202ENST00000413593 ALDH1B1P30837 517 aa12.89□□□□□ -0.35
TMEM248-202ENST00000413593 FKBP5Q13451 457 aaPredicted RBP12.89□□□□□ -0.35
TMEM248-202ENST00000413593 CCDC191Q8NCU4 936 aa12.89□□□□□ -0.35
TMEM248-202ENST00000413593 C7orf43Q8WVR3 580 aa12.89□□□□□ -0.35
TMEM248-202ENST00000413593 ARFGEF1Q9Y6D6 1849 aa12.89□□□□□ -0.35
TMEM248-202ENST00000413593 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
TMEM248-202ENST00000413593 RASSF7Q02833 373 aa12.88□□□□□ -0.35
TMEM248-202ENST00000413593 NEXNQ0ZGT2 675 aa12.88□□□□□ -0.35
TMEM248-202ENST00000413593 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
TMEM248-202ENST00000413593 C9orf131Q5VYM1 1079 aa12.88□□□□□ -0.35
TMEM248-202ENST00000413593 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
TMEM248-202ENST00000413593 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
TMEM248-202ENST00000413593 CRAMP1Q96RY5 1269 aa12.88□□□□□ -0.35
TMEM248-202ENST00000413593 CWC25Q9NXE8 425 aaPredicted RBP12.88□□□□□ -0.35
TMEM248-202ENST00000413593 ARFGEF2Q9Y6D5 1785 aa12.88□□□□□ -0.35
TMEM248-202ENST00000413593 CHD4Q14839 1912 aa12.88□□□□□ -0.35
TMEM248-202ENST00000413593 IRS4O14654 1257 aaPredicted RBP12.87□□□□□ -0.35
TMEM248-202ENST00000413593 PCCAP05165 728 aaPredicted RBP12.87□□□□□ -0.35
TMEM248-202ENST00000413593 PRELPP51888 382 aa12.87□□□□□ -0.35
TMEM248-202ENST00000413593 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
TMEM248-202ENST00000413593 DNAAF4Q8WXU2 420 aa12.87□□□□□ -0.35
TMEM248-202ENST00000413593 NEURL1BA8MQ27 555 aa12.86□□□□□ -0.35
TMEM248-202ENST00000413593 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
TMEM248-202ENST00000413593 LMNB1P20700 586 aa12.86□□□□□ -0.35
TMEM248-202ENST00000413593 HNRNPUQ00839 825 aaKnown RBP eCLIP12.86□□□□□ -0.35
TMEM248-202ENST00000413593 CWF19L2Q2TBE0 894 aaKnown RBP12.86□□□□□ -0.35
TMEM248-202ENST00000413593 CCDC93Q567U6 631 aa12.86□□□□□ -0.35
TMEM248-202ENST00000413593 OLFM4Q6UX06 510 aa12.86□□□□□ -0.35
TMEM248-202ENST00000413593 RNF181Q9P0P0 153 aa12.86□□□□□ -0.35
TMEM248-202ENST00000413593 ABCC4O15439 1325 aa12.86□□□□□ -0.35
TMEM248-202ENST00000413593 LTBP3Q9NS15 1303 aa12.86□□□□□ -0.35
TMEM248-202ENST00000413593 SF3B3Q15393 1217 aaKnown RBP12.85□□□□□ -0.35
TMEM248-202ENST00000413593 TAOK3Q9H2K8 898 aa12.85□□□□□ -0.35
TMEM248-202ENST00000413593 SLX4Q8IY92 1834 aa12.85□□□□□ -0.35
TMEM248-202ENST00000413593 F6X3S4 739 aa12.84□□□□□ -0.35
TMEM248-202ENST00000413593 PPEF1O14829 653 aaPredicted RBP12.84□□□□□ -0.35
TMEM248-202ENST00000413593 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
TMEM248-202ENST00000413593 HSP90B1P14625 803 aaKnown RBP12.84□□□□□ -0.35
TMEM248-202ENST00000413593 CC2D2BQ6DHV5 1058 aa12.84□□□□□ -0.35
TMEM248-202ENST00000413593 DDX46Q7L014 1031 aaKnown RBP12.84□□□□□ -0.35
TMEM248-202ENST00000413593 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
TMEM248-202ENST00000413593 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
TMEM248-202ENST00000413593 LINS1Q8NG48 757 aa12.84□□□□□ -0.35
TMEM248-202ENST00000413593 SSH1Q8WYL5 1049 aa12.84□□□□□ -0.35
TMEM248-202ENST00000413593 JARID2Q92833 1246 aaPredicted RBP12.84□□□□□ -0.35
TMEM248-202ENST00000413593 SNED1Q8TER0 1413 aa12.84□□□□□ -0.35
TMEM248-202ENST00000413593 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
TMEM248-202ENST00000413593 BBOX1O75936 387 aa12.83□□□□□ -0.36
TMEM248-202ENST00000413593 FKBP4Q02790 459 aaKnown RBP eCLIP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms