RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 RIC3Q7Z5B4 369 aa13.16□□□□□ -0.3
NCKIPSD-202ENST00000413374 SLC51AQ86UW1 340 aa13.16□□□□□ -0.3
NCKIPSD-202ENST00000413374 PLBD2Q8NHP8 589 aa13.16□□□□□ -0.3
NCKIPSD-202ENST00000413374 NLRP3Q96P20 1036 aa13.16□□□□□ -0.3
NCKIPSD-202ENST00000413374 BCORQ6W2J9 1755 aa13.15□□□□□ -0.3
NCKIPSD-202ENST00000413374 CCDC93Q567U6 631 aa13.15□□□□□ -0.3
NCKIPSD-202ENST00000413374 RBM17Q96I25 401 aaKnown RBP13.15□□□□□ -0.3
NCKIPSD-202ENST00000413374 TAOK3Q9H2K8 898 aa13.15□□□□□ -0.3
NCKIPSD-202ENST00000413374 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.31
NCKIPSD-202ENST00000413374 CRY2Q49AN0 593 aa13.14□□□□□ -0.31
NCKIPSD-202ENST00000413374 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
NCKIPSD-202ENST00000413374 FAM89AQ96GI7 184 aa13.14□□□□□ -0.31
NCKIPSD-202ENST00000413374 ZNF277Q9NRM2 450 aaPredicted RBP13.14□□□□□ -0.31
NCKIPSD-202ENST00000413374 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
NCKIPSD-202ENST00000413374 ANKRD31Q8N7Z5 1873 aa13.13□□□□□ -0.31
NCKIPSD-202ENST00000413374 GOLGA2Q08379 1002 aa13.13□□□□□ -0.31
NCKIPSD-202ENST00000413374 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
NCKIPSD-202ENST00000413374 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
NCKIPSD-202ENST00000413374 SOGA3Q5TF21 947 aa13.13□□□□□ -0.31
NCKIPSD-202ENST00000413374 JARID2Q92833 1246 aaPredicted RBP13.13□□□□□ -0.31
NCKIPSD-202ENST00000413374 MYD88Q99836 296 aa13.13□□□□□ -0.31
NCKIPSD-202ENST00000413374 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
NCKIPSD-202ENST00000413374 GLTPD2A6NH11 291 aa13.12□□□□□ -0.31
NCKIPSD-202ENST00000413374 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-202ENST00000413374 C16orf71Q8IYS4 520 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-202ENST00000413374 ISCA1Q9BUE6 129 aa13.12□□□□□ -0.31
NCKIPSD-202ENST00000413374 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-202ENST00000413374 SH3TC1Q8TE82 1336 aa13.12□□□□□ -0.31
NCKIPSD-202ENST00000413374 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
NCKIPSD-202ENST00000413374 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
NCKIPSD-202ENST00000413374 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
NCKIPSD-202ENST00000413374 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
NCKIPSD-202ENST00000413374 G2E3Q7L622 706 aa13.11□□□□□ -0.31
NCKIPSD-202ENST00000413374 WDR63Q8IWG1 891 aa13.11□□□□□ -0.31
NCKIPSD-202ENST00000413374 RTKN2Q8IZC4 609 aa13.11□□□□□ -0.31
NCKIPSD-202ENST00000413374 CRAMP1Q96RY5 1269 aa13.11□□□□□ -0.31
NCKIPSD-202ENST00000413374 IL16Q14005 1332 aa13.11□□□□□ -0.31
NCKIPSD-202ENST00000413374 IBTKQ9P2D0 1353 aaPredicted RBP13.1□□□□□ -0.31
NCKIPSD-202ENST00000413374 TOMM70O94826 608 aa13.1□□□□□ -0.31
NCKIPSD-202ENST00000413374 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
NCKIPSD-202ENST00000413374 EXOSC9Q06265 439 aaKnown RBP13.1□□□□□ -0.31
NCKIPSD-202ENST00000413374 STK31Q9BXU1 1019 aa13.1□□□□□ -0.31
NCKIPSD-202ENST00000413374 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
NCKIPSD-202ENST00000413374 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
NCKIPSD-202ENST00000413374 LTBP3Q9NS15 1303 aa13.1□□□□□ -0.31
NCKIPSD-202ENST00000413374 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
NCKIPSD-202ENST00000413374 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
NCKIPSD-202ENST00000413374 ARFGEF1Q9Y6D6 1849 aa13.09□□□□□ -0.31
NCKIPSD-202ENST00000413374 PI4KAP2A4QPH2 592 aa13.09□□□□□ -0.31
NCKIPSD-202ENST00000413374 DDX58O95786 925 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-202ENST00000413374 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-202ENST00000413374 DDX46Q7L014 1031 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-202ENST00000413374 PI4KAP1Q8N8J0 262 aa13.09□□□□□ -0.31
NCKIPSD-202ENST00000413374 ABCC4O15439 1325 aa13.09□□□□□ -0.31
NCKIPSD-202ENST00000413374 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-202ENST00000413374 VAMP4O75379 141 aa13.08□□□□□ -0.32
NCKIPSD-202ENST00000413374 VEGFAP15692 232 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-202ENST00000413374 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.32
NCKIPSD-202ENST00000413374 METTL22Q9BUU2 404 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-202ENST00000413374 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
NCKIPSD-202ENST00000413374 TMX4Q9H1E5 349 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-202ENST00000413374 NUP98P52948 1817 aa13.07□□□□□ -0.32
NCKIPSD-202ENST00000413374 POTECB2RU33 542 aa13.07□□□□□ -0.32
NCKIPSD-202ENST00000413374 TRIM28Q13263 835 aaKnown RBP13.07□□□□□ -0.32
NCKIPSD-202ENST00000413374 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
NCKIPSD-202ENST00000413374 CCDC85AQ96PX6 553 aaPredicted RBP13.07□□□□□ -0.32
NCKIPSD-202ENST00000413374 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
NCKIPSD-202ENST00000413374 RNF123Q5XPI4 1314 aa13.07□□□□□ -0.32
NCKIPSD-202ENST00000413374 ZC3H4Q9UPT8 1303 aaKnown RBP13.07□□□□□ -0.32
NCKIPSD-202ENST00000413374 BBOX1O75936 387 aa13.06□□□□□ -0.32
NCKIPSD-202ENST00000413374 HSPA6P17066 643 aa13.06□□□□□ -0.32
NCKIPSD-202ENST00000413374 GRAPQ13588 217 aa13.06□□□□□ -0.32
NCKIPSD-202ENST00000413374 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
NCKIPSD-202ENST00000413374 ZBTB38Q8NAP3 1195 aaPredicted RBP13.06□□□□□ -0.32
NCKIPSD-202ENST00000413374 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
NCKIPSD-202ENST00000413374 CWC25Q9NXE8 425 aaPredicted RBP13.06□□□□□ -0.32
NCKIPSD-202ENST00000413374 ATP6V0A2Q9Y487 856 aa13.06□□□□□ -0.32
NCKIPSD-202ENST00000413374 DLEC1Q9Y238 1755 aa13.06□□□□□ -0.32
NCKIPSD-202ENST00000413374 RIC1Q4ADV7 1423 aa13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 CCDC191Q8NCU4 936 aa13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 RBM46Q8TBY0 533 aaKnown RBP13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 JDP2Q8WYK2 163 aa13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 CELF1Q92879 486 aaKnown RBP13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 PSMD1Q99460 953 aa13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 MYH16Q9H6N6 1097 aa13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 GJA3Q9Y6H8 435 aa13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 ZNF541Q9H0D2 1346 aa13.05□□□□□ -0.32
NCKIPSD-202ENST00000413374 IGKV5-2P06315 115 aa13.04□□□□□ -0.32
NCKIPSD-202ENST00000413374 FLIIQ13045 1269 aa13.04□□□□□ -0.32
NCKIPSD-202ENST00000413374 FKBP5Q13451 457 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-202ENST00000413374 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
NCKIPSD-202ENST00000413374 AOC3Q16853 763 aa13.04□□□□□ -0.32
NCKIPSD-202ENST00000413374 DPP8Q6V1X1 898 aaPredicted RBP13.04□□□□□ -0.32
NCKIPSD-202ENST00000413374 SP8Q8IXZ3 490 aa13.04□□□□□ -0.32
NCKIPSD-202ENST00000413374 MPNDQ8N594 471 aa13.04□□□□□ -0.32
NCKIPSD-202ENST00000413374 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
NCKIPSD-202ENST00000413374 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
NCKIPSD-202ENST00000413374 PCCAP05165 728 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms