RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 UTP14AQ9BVJ6 771 aaKnown RBP16.93■□□□□ 0.3
SSB-203ENST00000413002 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
SSB-203ENST00000413002 RASSF7Q02833 373 aa16.92■□□□□ 0.3
SSB-203ENST00000413002 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
SSB-203ENST00000413002 HSP90AB3PQ58FF7 597 aa16.92■□□□□ 0.3
SSB-203ENST00000413002 MASTLQ96GX5 879 aa16.92■□□□□ 0.3
SSB-203ENST00000413002 STK31Q9BXU1 1019 aa16.92■□□□□ 0.3
SSB-203ENST00000413002 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
SSB-203ENST00000413002 COL11A2P13942 1736 aaPredicted RBP16.92■□□□□ 0.3
SSB-203ENST00000413002 KLRG2A4D1S0 409 aaPredicted RBP16.91■□□□□ 0.3
SSB-203ENST00000413002 VAMP4O75379 141 aa16.91■□□□□ 0.3
SSB-203ENST00000413002 RTL5Q5HYW3 569 aaPredicted RBP16.91■□□□□ 0.3
SSB-203ENST00000413002 STYK1Q6J9G0 422 aa16.91■□□□□ 0.3
SSB-203ENST00000413002 PRPF40BQ6NWY9 871 aaKnown RBP16.91■□□□□ 0.3
SSB-203ENST00000413002 TRMT112Q9UI30 125 aaKnown RBP16.91■□□□□ 0.3
SSB-203ENST00000413002 PDZRN3Q9UPQ7 1066 aa16.91■□□□□ 0.3
SSB-203ENST00000413002 CHD4Q14839 1912 aa16.9■□□□□ 0.3
SSB-203ENST00000413002 HCLS1P14317 486 aaPredicted RBP16.9■□□□□ 0.3
SSB-203ENST00000413002 NPR1P16066 1061 aa16.9■□□□□ 0.3
SSB-203ENST00000413002 OLFM4Q6UX06 510 aa16.9■□□□□ 0.3
SSB-203ENST00000413002 ZNF526Q8TF50 670 aaPredicted RBP16.9■□□□□ 0.3
SSB-203ENST00000413002 CNKSR1Q969H4 720 aa16.9■□□□□ 0.3
SSB-203ENST00000413002 CDCA7LQ96GN5 454 aa16.9■□□□□ 0.3
SSB-203ENST00000413002 MYD88Q99836 296 aa16.9■□□□□ 0.3
SSB-203ENST00000413002 ISCA1Q9BUE6 129 aa16.9■□□□□ 0.3
SSB-203ENST00000413002 TNRC6CQ9HCJ0 1690 aaKnown RBP16.89■□□□□ 0.29
SSB-203ENST00000413002 C9orf131Q5VYM1 1079 aa16.89■□□□□ 0.29
SSB-203ENST00000413002 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.29
SSB-203ENST00000413002 PRELPP51888 382 aa16.88■□□□□ 0.29
SSB-203ENST00000413002 SLC51AQ86UW1 340 aa16.88■□□□□ 0.29
SSB-203ENST00000413002 JARID2Q92833 1246 aaPredicted RBP16.88■□□□□ 0.29
SSB-203ENST00000413002 FAM89AQ96GI7 184 aa16.88■□□□□ 0.29
SSB-203ENST00000413002 CHMP4AQ9BY43 222 aa16.88■□□□□ 0.29
SSB-203ENST00000413002 MAP3K2Q9Y2U5 619 aa16.88■□□□□ 0.29
SSB-203ENST00000413002 DLEC1Q9Y238 1755 aa16.87■□□□□ 0.29
SSB-203ENST00000413002 PI4KAP2A4QPH2 592 aa16.87■□□□□ 0.29
SSB-203ENST00000413002 NFKBIEO00221 500 aa16.87■□□□□ 0.29
SSB-203ENST00000413002 CRY2Q49AN0 593 aa16.87■□□□□ 0.29
SSB-203ENST00000413002 PI4KAP1Q8N8J0 262 aa16.87■□□□□ 0.29
SSB-203ENST00000413002 RPGRQ92834 1020 aaKnown RBP16.87■□□□□ 0.29
SSB-203ENST00000413002 RNF181Q9P0P0 153 aa16.87■□□□□ 0.29
SSB-203ENST00000413002 ARFGEF1Q9Y6D6 1849 aa16.86■□□□□ 0.29
SSB-203ENST00000413002 DDX58O95786 925 aaKnown RBP16.86■□□□□ 0.29
SSB-203ENST00000413002 SLC10A5Q5PT55 438 aa16.86■□□□□ 0.29
SSB-203ENST00000413002 NLRP3Q96P20 1036 aa16.86■□□□□ 0.29
SSB-203ENST00000413002 SH3TC1Q8TE82 1336 aa16.86■□□□□ 0.29
SSB-203ENST00000413002 SLX4Q8IY92 1834 aa16.86■□□□□ 0.29
SSB-203ENST00000413002 ADCY9O60503 1353 aa16.86■□□□□ 0.29
SSB-203ENST00000413002 SLFN5Q08AF3 891 aa16.85■□□□□ 0.29
SSB-203ENST00000413002 FLIIQ13045 1269 aa16.85■□□□□ 0.29
SSB-203ENST00000413002 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
SSB-203ENST00000413002 C7orf43Q8WVR3 580 aa16.85■□□□□ 0.29
SSB-203ENST00000413002 METTL22Q9BUU2 404 aaPredicted RBP16.85■□□□□ 0.29
SSB-203ENST00000413002 E9PSI1 815 aa16.84■□□□□ 0.29
SSB-203ENST00000413002 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
SSB-203ENST00000413002 FKBP5Q13451 457 aaPredicted RBP16.84■□□□□ 0.29
SSB-203ENST00000413002 ANKRD36CQ5JPF3 1778 aa16.84■□□□□ 0.29
SSB-203ENST00000413002 IGKV5-2P06315 115 aa16.83■□□□□ 0.28
SSB-203ENST00000413002 HOXA10P31260 410 aaPredicted RBP16.83■□□□□ 0.28
SSB-203ENST00000413002 TRIM28Q13263 835 aaKnown RBP16.83■□□□□ 0.28
SSB-203ENST00000413002 CWF19L2Q2TBE0 894 aaKnown RBP16.83■□□□□ 0.28
SSB-203ENST00000413002 RBM17Q96I25 401 aaKnown RBP16.83■□□□□ 0.28
SSB-203ENST00000413002 ARFGEF2Q9Y6D5 1785 aa16.83■□□□□ 0.28
SSB-203ENST00000413002 RIC1Q4ADV7 1423 aa16.82■□□□□ 0.28
SSB-203ENST00000413002 RNF123Q5XPI4 1314 aa16.82■□□□□ 0.28
SSB-203ENST00000413002 IRS4O14654 1257 aaPredicted RBP16.82■□□□□ 0.28
SSB-203ENST00000413002 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
SSB-203ENST00000413002 F6X3S4 739 aa16.81■□□□□ 0.28
SSB-203ENST00000413002 LMNB1P20700 586 aa16.81■□□□□ 0.28
SSB-203ENST00000413002 CCDC191Q8NCU4 936 aa16.81■□□□□ 0.28
SSB-203ENST00000413002 CRAMP1Q96RY5 1269 aa16.81■□□□□ 0.28
SSB-203ENST00000413002 TAOK3Q9H2K8 898 aa16.81■□□□□ 0.28
SSB-203ENST00000413002 CWC25Q9NXE8 425 aaPredicted RBP16.81■□□□□ 0.28
SSB-203ENST00000413002 ABCC4O15439 1325 aa16.8■□□□□ 0.28
SSB-203ENST00000413002 CCDC93Q567U6 631 aa16.8■□□□□ 0.28
SSB-203ENST00000413002 ZBTB38Q8NAP3 1195 aaPredicted RBP16.8■□□□□ 0.28
SSB-203ENST00000413002 GPBP1L1Q9HC44 474 aaPredicted RBP16.8■□□□□ 0.28
SSB-203ENST00000413002 PPEF1O14829 653 aaPredicted RBP16.79■□□□□ 0.28
SSB-203ENST00000413002 HNRNPUQ00839 825 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSB-203ENST00000413002 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
SSB-203ENST00000413002 DNAAF4Q8WXU2 420 aa16.79■□□□□ 0.28
SSB-203ENST00000413002 CCDC85AQ96PX6 553 aaPredicted RBP16.79■□□□□ 0.28
SSB-203ENST00000413002 BCL2L13Q9BXK5 485 aa16.79■□□□□ 0.28
SSB-203ENST00000413002 ZNF277Q9NRM2 450 aaPredicted RBP16.79■□□□□ 0.28
SSB-203ENST00000413002 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
SSB-203ENST00000413002 PCCAP05165 728 aaPredicted RBP16.78■□□□□ 0.28
SSB-203ENST00000413002 SOGA3Q5TF21 947 aa16.78■□□□□ 0.28
SSB-203ENST00000413002 DDX46Q7L014 1031 aaKnown RBP16.78■□□□□ 0.28
SSB-203ENST00000413002 TRMT2AQ8IZ69 625 aaKnown RBP16.78■□□□□ 0.28
SSB-203ENST00000413002 SSH1Q8WYL5 1049 aa16.77■□□□□ 0.28
SSB-203ENST00000413002 FKBP4Q02790 459 aaKnown RBP eCLIP16.76■□□□□ 0.27
SSB-203ENST00000413002 SF3B3Q15393 1217 aaKnown RBP16.76■□□□□ 0.27
SSB-203ENST00000413002 RTKN2Q8IZC4 609 aa16.76■□□□□ 0.27
SSB-203ENST00000413002 MRPL50Q8N5N7 158 aaKnown RBP16.76■□□□□ 0.27
SSB-203ENST00000413002 CELF1Q92879 486 aaKnown RBP16.76■□□□□ 0.27
SSB-203ENST00000413002 NMRK2Q9NPI5 230 aa16.76■□□□□ 0.27
SSB-203ENST00000413002 SEC31BQ9NQW1 1179 aa16.76■□□□□ 0.27
SSB-203ENST00000413002 LTBP3Q9NS15 1303 aa16.75■□□□□ 0.27
SSB-203ENST00000413002 GRAPQ13588 217 aa16.75■□□□□ 0.27
SSB-203ENST00000413002 SLC4A10Q6U841 1118 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms