RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 DDX60Q8IY21 1712 aaKnown RBP24.3■■□□□ 1.48
TRIM56-202ENST00000412507 RIC1Q4ADV7 1423 aa24.3■■□□□ 1.48
TRIM56-202ENST00000412507 CCER2I3L3R5 266 aa24.3■■□□□ 1.48
TRIM56-202ENST00000412507 RASSF7Q02833 373 aa24.3■■□□□ 1.48
TRIM56-202ENST00000412507 PRPF40BQ6NWY9 871 aaKnown RBP24.3■■□□□ 1.48
TRIM56-202ENST00000412507 NLRP10Q86W26 655 aa24.3■■□□□ 1.48
TRIM56-202ENST00000412507 UTP14AQ9BVJ6 771 aaKnown RBP24.3■■□□□ 1.48
TRIM56-202ENST00000412507 CHMP4AQ9BY43 222 aa24.3■■□□□ 1.48
TRIM56-202ENST00000412507 SPINK5Q9NQ38 1064 aaPredicted RBP24.3■■□□□ 1.48
TRIM56-202ENST00000412507 TCERG1O14776 1098 aaKnown RBP24.29■■□□□ 1.48
TRIM56-202ENST00000412507 C9orf131Q5VYM1 1079 aa24.29■■□□□ 1.48
TRIM56-202ENST00000412507 TAF1P21675 1872 aa24.29■■□□□ 1.48
TRIM56-202ENST00000412507 TIAM2Q8IVF5 1701 aa24.29■■□□□ 1.48
TRIM56-202ENST00000412507 ZNF428Q96B54 188 aa24.28■■□□□ 1.48
TRIM56-202ENST00000412507 GOLGA2Q08379 1002 aa24.27■■□□□ 1.48
TRIM56-202ENST00000412507 RIC3Q7Z5B4 369 aa24.27■■□□□ 1.48
TRIM56-202ENST00000412507 ATP5J2-PTCD1G3V325 749 aa24.26■■□□□ 1.47
TRIM56-202ENST00000412507 EXOSC9Q06265 439 aaKnown RBP24.26■■□□□ 1.47
TRIM56-202ENST00000412507 CRY2Q49AN0 593 aa24.26■■□□□ 1.47
TRIM56-202ENST00000412507 ZNF526Q8TF50 670 aaPredicted RBP24.26■■□□□ 1.47
TRIM56-202ENST00000412507 ISCA1Q9BUE6 129 aa24.26■■□□□ 1.47
TRIM56-202ENST00000412507 STK31Q9BXU1 1019 aa24.26■■□□□ 1.47
TRIM56-202ENST00000412507 RNF181Q9P0P0 153 aa24.26■■□□□ 1.47
TRIM56-202ENST00000412507 TRMT112Q9UI30 125 aaKnown RBP24.26■■□□□ 1.47
TRIM56-202ENST00000412507 NFKBIEO00221 500 aa24.25■■□□□ 1.47
TRIM56-202ENST00000412507 C3orf67Q6ZVT6 689 aa24.25■■□□□ 1.47
TRIM56-202ENST00000412507 SYNE4Q8N205 404 aa24.25■■□□□ 1.47
TRIM56-202ENST00000412507 RNF123Q5XPI4 1314 aa24.25■■□□□ 1.47
TRIM56-202ENST00000412507 ZNF521Q96K83 1311 aa24.25■■□□□ 1.47
TRIM56-202ENST00000412507 ALDH1B1P30837 517 aa24.24■■□□□ 1.47
TRIM56-202ENST00000412507 PRELPP51888 382 aa24.24■■□□□ 1.47
TRIM56-202ENST00000412507 SLC10A5Q5PT55 438 aa24.24■■□□□ 1.47
TRIM56-202ENST00000412507 DIEXFQ68CQ4 756 aaKnown RBP24.24■■□□□ 1.47
TRIM56-202ENST00000412507 MYH16Q9H6N6 1097 aa24.24■■□□□ 1.47
TRIM56-202ENST00000412507 RPGRQ92834 1020 aaKnown RBP24.23■■□□□ 1.47
TRIM56-202ENST00000412507 NLRP3Q96P20 1036 aa24.23■■□□□ 1.47
TRIM56-202ENST00000412507 SH3TC1Q8TE82 1336 aa24.22■■□□□ 1.47
TRIM56-202ENST00000412507 VAMP4O75379 141 aa24.22■■□□□ 1.47
TRIM56-202ENST00000412507 LMNB1P20700 586 aa24.22■■□□□ 1.47
TRIM56-202ENST00000412507 C7orf43Q8WVR3 580 aa24.22■■□□□ 1.47
TRIM56-202ENST00000412507 GPBP1L1Q9HC44 474 aaPredicted RBP24.22■■□□□ 1.47
TRIM56-202ENST00000412507 DDX58O95786 925 aaKnown RBP24.21■■□□□ 1.47
TRIM56-202ENST00000412507 SLC4A2P04920 1241 aa24.21■■□□□ 1.47
TRIM56-202ENST00000412507 HCLS1P14317 486 aaPredicted RBP24.21■■□□□ 1.47
TRIM56-202ENST00000412507 HOXA10P31260 410 aaPredicted RBP24.21■■□□□ 1.47
TRIM56-202ENST00000412507 SOGA3Q5TF21 947 aa24.21■■□□□ 1.47
TRIM56-202ENST00000412507 G2E3Q7L622 706 aa24.21■■□□□ 1.47
TRIM56-202ENST00000412507 MYD88Q99836 296 aa24.21■■□□□ 1.47
TRIM56-202ENST00000412507 OLFM4Q6UX06 510 aa24.2■■□□□ 1.46
TRIM56-202ENST00000412507 RBM17Q96I25 401 aaKnown RBP24.2■■□□□ 1.46
TRIM56-202ENST00000412507 MYH3P11055 1940 aa24.2■■□□□ 1.46
TRIM56-202ENST00000412507 TRIM28Q13263 835 aaKnown RBP24.19■■□□□ 1.46
TRIM56-202ENST00000412507 FAM89AQ96GI7 184 aa24.19■■□□□ 1.46
TRIM56-202ENST00000412507 CCDC93Q567U6 631 aa24.18■■□□□ 1.46
TRIM56-202ENST00000412507 KSR2Q6VAB6 950 aa24.18■■□□□ 1.46
TRIM56-202ENST00000412507 MIER1Q8N108 512 aa24.18■■□□□ 1.46
TRIM56-202ENST00000412507 METTL22Q9BUU2 404 aaPredicted RBP24.18■■□□□ 1.46
TRIM56-202ENST00000412507 TAOK3Q9H2K8 898 aa24.18■■□□□ 1.46
TRIM56-202ENST00000412507 MAP3K2Q9Y2U5 619 aa24.18■■□□□ 1.46
TRIM56-202ENST00000412507 LTBP3Q9NS15 1303 aa24.17■■□□□ 1.46
TRIM56-202ENST00000412507 PI4KAP2A4QPH2 592 aa24.17■■□□□ 1.46
TRIM56-202ENST00000412507 RTL5Q5HYW3 569 aaPredicted RBP24.17■■□□□ 1.46
TRIM56-202ENST00000412507 PI4KAP1Q8N8J0 262 aa24.17■■□□□ 1.46
TRIM56-202ENST00000412507 CRAMP1Q96RY5 1269 aa24.17■■□□□ 1.46
TRIM56-202ENST00000412507 FLIIQ13045 1269 aa24.15■■□□□ 1.46
TRIM56-202ENST00000412507 ABCC4O15439 1325 aa24.14■■□□□ 1.46
TRIM56-202ENST00000412507 CCDC191Q8NCU4 936 aa24.14■■□□□ 1.45
TRIM56-202ENST00000412507 SLC51AQ86UW1 340 aa24.13■■□□□ 1.45
TRIM56-202ENST00000412507 CWC25Q9NXE8 425 aaPredicted RBP24.13■■□□□ 1.45
TRIM56-202ENST00000412507 ZC3H4Q9UPT8 1303 aaKnown RBP24.12■■□□□ 1.45
TRIM56-202ENST00000412507 SNED1Q8TER0 1413 aa24.12■■□□□ 1.45
TRIM56-202ENST00000412507 IRS4O14654 1257 aaPredicted RBP24.12■■□□□ 1.45
TRIM56-202ENST00000412507 PPEF1O14829 653 aaPredicted RBP24.12■■□□□ 1.45
TRIM56-202ENST00000412507 FKBP4Q02790 459 aaKnown RBP eCLIP24.12■■□□□ 1.45
TRIM56-202ENST00000412507 RTKN2Q8IZC4 609 aa24.12■■□□□ 1.45
TRIM56-202ENST00000412507 ZBTB38Q8NAP3 1195 aaPredicted RBP24.12■■□□□ 1.45
TRIM56-202ENST00000412507 E9PSI1 815 aa24.11■■□□□ 1.45
TRIM56-202ENST00000412507 IGKV5-2P06315 115 aa24.11■■□□□ 1.45
TRIM56-202ENST00000412507 NEXNQ0ZGT2 675 aa24.11■■□□□ 1.45
TRIM56-202ENST00000412507 FKBP5Q13451 457 aaPredicted RBP24.11■■□□□ 1.45
TRIM56-202ENST00000412507 DDX46Q7L014 1031 aaKnown RBP24.11■■□□□ 1.45
TRIM56-202ENST00000412507 JARID2Q92833 1246 aaPredicted RBP24.11■■□□□ 1.45
TRIM56-202ENST00000412507 PCCAP05165 728 aaPredicted RBP24.1■■□□□ 1.45
TRIM56-202ENST00000412507 SLFN5Q08AF3 891 aa24.1■■□□□ 1.45
TRIM56-202ENST00000412507 CC2D2BQ6DHV5 1058 aa24.1■■□□□ 1.45
TRIM56-202ENST00000412507 NMRK2Q9NPI5 230 aa24.1■■□□□ 1.45
TRIM56-202ENST00000412507 COL4A1P02462 1669 aa24.09■■□□□ 1.45
TRIM56-202ENST00000412507 KIF3CO14782 793 aa24.09■■□□□ 1.45
TRIM56-202ENST00000412507 CWF19L2Q2TBE0 894 aaKnown RBP24.09■■□□□ 1.45
TRIM56-202ENST00000412507 CDCA7LQ96GN5 454 aa24.09■■□□□ 1.45
TRIM56-202ENST00000412507 ZNF277Q9NRM2 450 aaPredicted RBP24.09■■□□□ 1.45
TRIM56-202ENST00000412507 SPEF2Q9C093 1822 aa24.09■■□□□ 1.45
TRIM56-202ENST00000412507 LRRC37AA6NMS7 1700 aa24.09■■□□□ 1.45
TRIM56-202ENST00000412507 KDM2BQ8NHM5 1336 aa24.09■■□□□ 1.45
TRIM56-202ENST00000412507 C1QTNF8P60827 252 aa24.08■■□□□ 1.45
TRIM56-202ENST00000412507 SF3B3Q15393 1217 aaKnown RBP24.08■■□□□ 1.45
TRIM56-202ENST00000412507 GRAPQ13588 217 aa24.07■■□□□ 1.44
TRIM56-202ENST00000412507 GRAPLQ8TC17 118 aaPredicted RBP24.07■■□□□ 1.44
TRIM56-202ENST00000412507 DNAAF4Q8WXU2 420 aa24.07■■□□□ 1.44
TRIM56-202ENST00000412507 ATP6V0A2Q9Y487 856 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms