RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 MCTP1Q6DN14 999 aa5.95□□□□□ -1.46
HMGB3P2-201ENST00000411913 DEPDC4Q8N2C3 294 aa5.95□□□□□ -1.46
HMGB3P2-201ENST00000411913 WFDC12Q8WWY7 111 aa5.95□□□□□ -1.46
HMGB3P2-201ENST00000411913 SUSD3Q96L08 255 aa5.95□□□□□ -1.46
HMGB3P2-201ENST00000411913 PNMA5Q96PV4 448 aa5.95□□□□□ -1.46
HMGB3P2-201ENST00000411913 SSBP4Q9BWG4 385 aaPredicted RBP5.95□□□□□ -1.46
HMGB3P2-201ENST00000411913 IREB2P48200 963 aaKnown RBP5.94□□□□□ -1.46
HMGB3P2-201ENST00000411913 TRIM50Q86XT4 487 aa5.94□□□□□ -1.46
HMGB3P2-201ENST00000411913 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
HMGB3P2-201ENST00000411913 TPCN2Q8NHX9 752 aa5.94□□□□□ -1.46
HMGB3P2-201ENST00000411913 TSPAN10Q9H1Z9 355 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P2-201ENST00000411913 PCMTD2Q9NV79 361 aa5.94□□□□□ -1.46
HMGB3P2-201ENST00000411913 DNAJB12Q9NXW2 375 aaKnown RBP5.94□□□□□ -1.46
HMGB3P2-201ENST00000411913 PAX4O43316 350 aa5.93□□□□□ -1.46
HMGB3P2-201ENST00000411913 NFATC2IPQ8NCF5 419 aa5.93□□□□□ -1.46
HMGB3P2-201ENST00000411913 EFCC1Q9HA90 598 aa5.93□□□□□ -1.46
HMGB3P2-201ENST00000411913 USP17L5A8MUK1 530 aa5.92□□□□□ -1.46
HMGB3P2-201ENST00000411913 HIRAP54198 1017 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P2-201ENST00000411913 CCDC102BQ68D86 513 aa5.92□□□□□ -1.46
HMGB3P2-201ENST00000411913 MSL1Q68DK7 614 aa5.92□□□□□ -1.46
HMGB3P2-201ENST00000411913 BTLAQ7Z6A9 289 aa5.92□□□□□ -1.46
HMGB3P2-201ENST00000411913 FAM35AQ86V20 835 aa5.92□□□□□ -1.46
HMGB3P2-201ENST00000411913 DTWD1Q8N5C7 304 aa5.92□□□□□ -1.46
HMGB3P2-201ENST00000411913 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P2-201ENST00000411913 PPP1R12BO60237 982 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P2-201ENST00000411913 NOS3P29474 1203 aa5.91□□□□□ -1.46
HMGB3P2-201ENST00000411913 TXKP42681 527 aa5.91□□□□□ -1.46
HMGB3P2-201ENST00000411913 ATP1A2P50993 1020 aa5.91□□□□□ -1.46
HMGB3P2-201ENST00000411913 HIF1AQ16665 826 aa5.91□□□□□ -1.46
HMGB3P2-201ENST00000411913 FBXO11Q86XK2 927 aa5.91□□□□□ -1.46
HMGB3P2-201ENST00000411913 NAGPAQ9UK23 515 aa5.91□□□□□ -1.46
HMGB3P2-201ENST00000411913 CPB1P15086 417 aa5.9□□□□□ -1.46
HMGB3P2-201ENST00000411913 NFKB1P19838 968 aa5.9□□□□□ -1.46
HMGB3P2-201ENST00000411913 CCINQ13939 588 aa5.9□□□□□ -1.46
HMGB3P2-201ENST00000411913 PCSK7Q16549 785 aa5.9□□□□□ -1.46
HMGB3P2-201ENST00000411913 WFDC8Q8IUA0 241 aa5.9□□□□□ -1.46
HMGB3P2-201ENST00000411913 WWC1Q8IX03 1113 aa5.9□□□□□ -1.46
HMGB3P2-201ENST00000411913 ALDH16A1Q8IZ83 802 aa5.9□□□□□ -1.46
HMGB3P2-201ENST00000411913 GSX2Q9BZM3 304 aa5.9□□□□□ -1.46
HMGB3P2-201ENST00000411913 RBM19Q9Y4C8 960 aaKnown RBP5.9□□□□□ -1.46
HMGB3P2-201ENST00000411913 ZBTB7BO15156 539 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P2-201ENST00000411913 COBLO75128 1261 aa5.89□□□□□ -1.47
HMGB3P2-201ENST00000411913 SSTR4P31391 388 aa5.89□□□□□ -1.47
HMGB3P2-201ENST00000411913 IGF2-ASQ6U949 168 aa5.89□□□□□ -1.47
HMGB3P2-201ENST00000411913 PRR23CQ6ZRP0 262 aa5.89□□□□□ -1.47
HMGB3P2-201ENST00000411913 NGLY1Q96IV0 654 aa5.89□□□□□ -1.47
HMGB3P2-201ENST00000411913 MEGF10Q96KG7 1140 aa5.89□□□□□ -1.47
HMGB3P2-201ENST00000411913 ALG2Q9H553 416 aa5.89□□□□□ -1.47
HMGB3P2-201ENST00000411913 COL17A1Q9UMD9 1497 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P2-201ENST00000411913 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
HMGB3P2-201ENST00000411913 ELMSAN1Q6PJG2 1045 aa5.88□□□□□ -1.47
HMGB3P2-201ENST00000411913 POTEAQ6S8J7 498 aa5.88□□□□□ -1.47
HMGB3P2-201ENST00000411913 ILDR2Q71H61 639 aa5.88□□□□□ -1.47
HMGB3P2-201ENST00000411913 SLC51AQ86UW1 340 aa5.88□□□□□ -1.47
HMGB3P2-201ENST00000411913 KIAA1024Q9UPX6 916 aa5.88□□□□□ -1.47
HMGB3P2-201ENST00000411913 FSTP19883 344 aa5.87□□□□□ -1.47
HMGB3P2-201ENST00000411913 IRAK1P51617 712 aa5.87□□□□□ -1.47
HMGB3P2-201ENST00000411913 CLDN10P78369 228 aa5.87□□□□□ -1.47
HMGB3P2-201ENST00000411913 TSEN2Q8NCE0 465 aaKnown RBP5.87□□□□□ -1.47
HMGB3P2-201ENST00000411913 CHMP7Q8WUX9 453 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P2-201ENST00000411913 ATAD2Q6PL18 1390 aa5.86□□□□□ -1.47
HMGB3P2-201ENST00000411913 PALM3A6NDB9 673 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P2-201ENST00000411913 M0R2N6 131 aa5.86□□□□□ -1.47
HMGB3P2-201ENST00000411913 EPB42P16452 691 aa5.86□□□□□ -1.47
HMGB3P2-201ENST00000411913 LARGE2Q8N3Y3 721 aa5.86□□□□□ -1.47
HMGB3P2-201ENST00000411913 OGFOD1Q8N543 542 aa5.86□□□□□ -1.47
HMGB3P2-201ENST00000411913 SCG3Q8WXD2 468 aaKnown RBP5.86□□□□□ -1.47
HMGB3P2-201ENST00000411913 LPIN3Q9BQK8 851 aa5.86□□□□□ -1.47
HMGB3P2-201ENST00000411913 FRRS1LQ9P0K9 344 aa5.86□□□□□ -1.47
HMGB3P2-201ENST00000411913 USP17L3A6NCW0 530 aa5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 USP17L4A6NCW7 530 aa5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 PTCD1O75127 700 aaKnown RBP5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 YBX3P16989 372 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 MLLT1Q03111 559 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 MCM6Q14566 821 aa5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 GRIK5Q16478 980 aa5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 PERM1Q5SV97 790 aa5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 USP17L2Q6R6M4 530 aa5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 USP17L1Q7RTZ2 530 aa5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 KRT25Q7Z3Z0 450 aa5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 AKTIPQ9H8T0 292 aa5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 COG6Q9Y2V7 657 aa5.85□□□□□ -1.47
HMGB3P2-201ENST00000411913 TGFBR3LH3BV60 316 aa5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 C21orf2O43822 256 aa5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 MAP3K6O95382 1288 aa5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 ARID4AP29374 1257 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 IER5Q5VY09 327 aa5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 DHX32Q7L7V1 743 aaKnown RBP5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 PLEKHM2Q8IWE5 1019 aa5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 STAG2Q8N3U4 1231 aa5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 GAS2L2Q8NHY3 880 aa5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 ZNF594Q96JF6 807 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 C2orf49Q9BVC5 232 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 MKRN1Q9UHC7 482 aaKnown RBP5.84□□□□□ -1.47
HMGB3P2-201ENST00000411913 DEAF1O75398 565 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P2-201ENST00000411913 ALX3O95076 343 aa5.83□□□□□ -1.48
HMGB3P2-201ENST00000411913 PLAURQ03405 335 aa5.83□□□□□ -1.48
HMGB3P2-201ENST00000411913 RTN1Q16799 776 aa5.83□□□□□ -1.48
HMGB3P2-201ENST00000411913 TRPM4Q8TD43 1214 aa5.83□□□□□ -1.48
HMGB3P2-201ENST00000411913 MRPL18Q9H0U6 180 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms