RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 ZNF652Q9Y2D9 606 aa8.12□□□□□ -1.11
HMGN1P20-201ENST00000411849 AKAP11Q9UKA4 1901 aa8.11□□□□□ -1.11
HMGN1P20-201ENST00000411849 FZD9O00144 591 aa8.11□□□□□ -1.11
HMGN1P20-201ENST00000411849 LMOD1P29536 600 aaPredicted RBP8.11□□□□□ -1.11
HMGN1P20-201ENST00000411849 ALDH1B1P30837 517 aa8.11□□□□□ -1.11
HMGN1P20-201ENST00000411849 MNX1P50219 401 aaPredicted RBP8.11□□□□□ -1.11
HMGN1P20-201ENST00000411849 CLEC4GQ6UXB4 293 aa8.11□□□□□ -1.11
HMGN1P20-201ENST00000411849 TPTE2Q6XPS3 522 aa8.11□□□□□ -1.11
HMGN1P20-201ENST00000411849 DZIP3Q86Y13 1208 aaKnown RBP8.11□□□□□ -1.11
HMGN1P20-201ENST00000411849 CAPNS2Q96L46 248 aa8.11□□□□□ -1.11
HMGN1P20-201ENST00000411849 DDX21Q9NR30 783 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGN1P20-201ENST00000411849 KLRG2A4D1S0 409 aaPredicted RBP8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 GNAT3A8MTJ3 354 aa8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 RGL2O15211 777 aa8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 CA12O43570 354 aa8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 GALR2O43603 387 aaPredicted RBP8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 DIAPH1O60610 1272 aaKnown RBP8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 A1BGP04217 495 aa8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 MAP2K2P36507 400 aa8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 EIF6P56537 245 aaKnown RBP8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 EIF4G2P78344 907 aaKnown RBP eCLIP8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 GPR101Q96P66 508 aaPredicted RBP8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 PDE4DIPQ5VU43 2346 aa8.1□□□□□ -1.11
HMGN1P20-201ENST00000411849 CLCN6P51797 869 aa8.09□□□□□ -1.11
HMGN1P20-201ENST00000411849 GRM1Q13255 1194 aa8.09□□□□□ -1.11
HMGN1P20-201ENST00000411849 GRIPAP1Q4V328 841 aa8.09□□□□□ -1.11
HMGN1P20-201ENST00000411849 CC2D2BQ6DHV5 1058 aa8.09□□□□□ -1.11
HMGN1P20-201ENST00000411849 SYNE4Q8N205 404 aa8.09□□□□□ -1.11
HMGN1P20-201ENST00000411849 GAS2L2Q8NHY3 880 aa8.09□□□□□ -1.11
HMGN1P20-201ENST00000411849 CFAP44Q96MT7 982 aa8.09□□□□□ -1.11
HMGN1P20-201ENST00000411849 PSMD1Q99460 953 aa8.09□□□□□ -1.11
HMGN1P20-201ENST00000411849 GTF2E1P29083 439 aaPredicted RBP8.08□□□□□ -1.12
HMGN1P20-201ENST00000411849 CYP4F22Q6NT55 531 aa8.08□□□□□ -1.12
HMGN1P20-201ENST00000411849 USP50Q70EL3 339 aaPredicted RBP8.08□□□□□ -1.12
HMGN1P20-201ENST00000411849 IL17REQ8NFR9 667 aa8.08□□□□□ -1.12
HMGN1P20-201ENST00000411849 NIP7Q9Y221 180 aaKnown RBP eCLIP8.08□□□□□ -1.12
HMGN1P20-201ENST00000411849 GJA3Q9Y6H8 435 aa8.08□□□□□ -1.12
HMGN1P20-201ENST00000411849 TLL2Q9Y6L7 1015 aa8.08□□□□□ -1.12
HMGN1P20-201ENST00000411849 CEMIPQ8WUJ3 1361 aa8.08□□□□□ -1.12
HMGN1P20-201ENST00000411849 COL4A5P29400 1685 aa8.08□□□□□ -1.12
HMGN1P20-201ENST00000411849 SNED1Q8TER0 1413 aa8.07□□□□□ -1.12
HMGN1P20-201ENST00000411849 SPDYE4A6NLX3 237 aa8.07□□□□□ -1.12
HMGN1P20-201ENST00000411849 BTBD11A6QL63 1104 aa8.07□□□□□ -1.12
HMGN1P20-201ENST00000411849 HSPA5P11021 654 aaKnown RBP8.07□□□□□ -1.12
HMGN1P20-201ENST00000411849 OLFM4Q6UX06 510 aa8.07□□□□□ -1.12
HMGN1P20-201ENST00000411849 MCOLN1Q9GZU1 580 aa8.07□□□□□ -1.12
HMGN1P20-201ENST00000411849 POLR2AP24928 1970 aaKnown RBP8.07□□□□□ -1.12
HMGN1P20-201ENST00000411849 DLG5Q8TDM6 1919 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 POTEB2H3BUK9 544 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 SNRPA1P09661 255 aaKnown RBP8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 EPS15P42566 896 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 SCNN1DP51172 638 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 BRPF1P55201 1214 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 AMER1Q5JTC6 1135 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 CST9Q5W186 159 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 LARGE2Q8N3Y3 721 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 RPGRQ92834 1020 aaKnown RBP8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 HHIPL1Q96JK4 782 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 NYXQ9GZU5 481 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 TSKSQ9UJT2 592 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 USP16Q9Y5T5 823 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 LAMB2P55268 1798 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 ANKRD36CQ5JPF3 1778 aa8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 COL3A1P02461 1466 aaPredicted RBP8.06□□□□□ -1.12
HMGN1P20-201ENST00000411849 RIC1Q4ADV7 1423 aa8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 KDM3BQ7LBC6 1761 aa8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 FAM177BA6PVY3 158 aa8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 TRAF5O00463 557 aa8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 U2SURPO15042 1029 aaKnown RBP8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 AOC2O75106 756 aa8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 PIP4K2AP48426 406 aaPredicted RBP8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 FMR1Q06787 632 aaKnown RBP eCLIP8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 DGKZQ13574 1117 aa8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 CRY2Q49AN0 593 aa8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 SAPCD2Q86UD0 394 aa8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 NIM1KQ8IY84 436 aa8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 DDX60Q8IY21 1712 aaKnown RBP8.05□□□□□ -1.12
HMGN1P20-201ENST00000411849 CLSPNQ9HAW4 1339 aa8.04□□□□□ -1.12
HMGN1P20-201ENST00000411849 KCNQ3O43525 872 aa8.04□□□□□ -1.12
HMGN1P20-201ENST00000411849 CELF2O95319 508 aaKnown RBP8.04□□□□□ -1.12
HMGN1P20-201ENST00000411849 HOXA10P31260 410 aaPredicted RBP8.04□□□□□ -1.12
HMGN1P20-201ENST00000411849 PHF12Q96QT6 1004 aa8.04□□□□□ -1.12
HMGN1P20-201ENST00000411849 PCGF6Q9BYE7 350 aa8.04□□□□□ -1.12
HMGN1P20-201ENST00000411849 TMX4Q9H1E5 349 aaPredicted RBP8.04□□□□□ -1.12
HMGN1P20-201ENST00000411849 VPS33BQ9H267 617 aa8.04□□□□□ -1.12
HMGN1P20-201ENST00000411849 ADARB2Q9NS39 739 aaKnown RBP8.04□□□□□ -1.12
HMGN1P20-201ENST00000411849 GPRC5DQ9NZD1 345 aa8.04□□□□□ -1.12
HMGN1P20-201ENST00000411849 KIF7Q2M1P5 1343 aa8.03□□□□□ -1.12
HMGN1P20-201ENST00000411849 CDHR2Q9BYE9 1310 aa8.03□□□□□ -1.12
HMGN1P20-201ENST00000411849 IBTKQ9P2D0 1353 aaPredicted RBP8.03□□□□□ -1.12
HMGN1P20-201ENST00000411849 NOGQ13253 232 aa8.03□□□□□ -1.12
HMGN1P20-201ENST00000411849 RBM17Q96I25 401 aaKnown RBP8.03□□□□□ -1.12
HMGN1P20-201ENST00000411849 CRAMP1Q96RY5 1269 aa8.03□□□□□ -1.12
HMGN1P20-201ENST00000411849 ABCC12Q96J65 1359 aa8.02□□□□□ -1.13
HMGN1P20-201ENST00000411849 NPC1L1Q9UHC9 1359 aa8.02□□□□□ -1.13
HMGN1P20-201ENST00000411849 PRAMEF22A3QJZ6 481 aa8.02□□□□□ -1.13
HMGN1P20-201ENST00000411849 NBPF26B4DH59 902 aa8.02□□□□□ -1.13
HMGN1P20-201ENST00000411849 ERVV-1B6SEH8 477 aa8.02□□□□□ -1.13
HMGN1P20-201ENST00000411849 PPEF1O14829 653 aaPredicted RBP8.02□□□□□ -1.13
HMGN1P20-201ENST00000411849 PPIP5K2O43314 1243 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms