RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 SRGNP10124 158 aa20.97■□□□□ 0.95
NOD1-202ENST00000411552 ATP5J2-PTCD1G3V325 749 aa20.96■□□□□ 0.95
NOD1-202ENST00000411552 DDX58O95786 925 aaKnown RBP20.96■□□□□ 0.95
NOD1-202ENST00000411552 SLFN5Q08AF3 891 aa20.96■□□□□ 0.95
NOD1-202ENST00000411552 G2E3Q7L622 706 aa20.96■□□□□ 0.95
NOD1-202ENST00000411552 CDCA7LQ96GN5 454 aa20.96■□□□□ 0.95
NOD1-202ENST00000411552 ISCA1Q9BUE6 129 aa20.96■□□□□ 0.95
NOD1-202ENST00000411552 RIC1Q4ADV7 1423 aa20.95■□□□□ 0.95
NOD1-202ENST00000411552 CACNA1SQ13698 1873 aa20.95■□□□□ 0.94
NOD1-202ENST00000411552 STYK1Q6J9G0 422 aa20.95■□□□□ 0.94
NOD1-202ENST00000411552 ZNF428Q96B54 188 aa20.95■□□□□ 0.94
NOD1-202ENST00000411552 MASTLQ96GX5 879 aa20.95■□□□□ 0.94
NOD1-202ENST00000411552 ARHGAP27Q6ZUM4 889 aa20.94■□□□□ 0.94
NOD1-202ENST00000411552 TRMT112Q9UI30 125 aaKnown RBP20.94■□□□□ 0.94
NOD1-202ENST00000411552 RNF123Q5XPI4 1314 aa20.94■□□□□ 0.94
NOD1-202ENST00000411552 SLX4Q8IY92 1834 aa20.94■□□□□ 0.94
NOD1-202ENST00000411552 NPR1P16066 1061 aa20.93■□□□□ 0.94
NOD1-202ENST00000411552 CRY2Q49AN0 593 aa20.93■□□□□ 0.94
NOD1-202ENST00000411552 SYNE4Q8N205 404 aa20.93■□□□□ 0.94
NOD1-202ENST00000411552 CNKSR1Q969H4 720 aa20.93■□□□□ 0.94
NOD1-202ENST00000411552 MYD88Q99836 296 aa20.93■□□□□ 0.94
NOD1-202ENST00000411552 MAP3K2Q9Y2U5 619 aa20.93■□□□□ 0.94
NOD1-202ENST00000411552 ADCY9O60503 1353 aa20.93■□□□□ 0.94
NOD1-202ENST00000411552 PI4KAP2A4QPH2 592 aa20.92■□□□□ 0.94
NOD1-202ENST00000411552 FLIIQ13045 1269 aa20.92■□□□□ 0.94
NOD1-202ENST00000411552 TRIM28Q13263 835 aaKnown RBP20.92■□□□□ 0.94
NOD1-202ENST00000411552 SLC10A5Q5PT55 438 aa20.92■□□□□ 0.94
NOD1-202ENST00000411552 KSR2Q6VAB6 950 aa20.92■□□□□ 0.94
NOD1-202ENST00000411552 C3orf67Q6ZVT6 689 aa20.92■□□□□ 0.94
NOD1-202ENST00000411552 TRMT2AQ8IZ69 625 aaKnown RBP20.92■□□□□ 0.94
NOD1-202ENST00000411552 PI4KAP1Q8N8J0 262 aa20.92■□□□□ 0.94
NOD1-202ENST00000411552 METTL22Q9BUU2 404 aaPredicted RBP20.92■□□□□ 0.94
NOD1-202ENST00000411552 PRPF40BQ6NWY9 871 aaKnown RBP20.91■□□□□ 0.94
NOD1-202ENST00000411552 SH3TC1Q8TE82 1336 aa20.91■□□□□ 0.94
NOD1-202ENST00000411552 LAMB2P55268 1798 aa20.9■□□□□ 0.94
NOD1-202ENST00000411552 HCLS1P14317 486 aaPredicted RBP20.89■□□□□ 0.93
NOD1-202ENST00000411552 FKBP5Q13451 457 aaPredicted RBP20.89■□□□□ 0.93
NOD1-202ENST00000411552 RPGRQ92834 1020 aaKnown RBP20.89■□□□□ 0.93
NOD1-202ENST00000411552 ZNF219Q9P2Y4 722 aaPredicted RBP20.89■□□□□ 0.93
NOD1-202ENST00000411552 DDX60Q8IY21 1712 aaKnown RBP20.88■□□□□ 0.93
NOD1-202ENST00000411552 C21orf2O43822 256 aa20.88■□□□□ 0.93
NOD1-202ENST00000411552 HNRNPUQ00839 825 aaKnown RBP eCLIP20.88■□□□□ 0.93
NOD1-202ENST00000411552 FAM89AQ96GI7 184 aa20.88■□□□□ 0.93
NOD1-202ENST00000411552 NLRP3Q96P20 1036 aa20.88■□□□□ 0.93
NOD1-202ENST00000411552 HOXA10P31260 410 aaPredicted RBP20.87■□□□□ 0.93
NOD1-202ENST00000411552 CCDC191Q8NCU4 936 aa20.87■□□□□ 0.93
NOD1-202ENST00000411552 SBF1O95248 1867 aa20.86■□□□□ 0.93
NOD1-202ENST00000411552 IGKV5-2P06315 115 aa20.86■□□□□ 0.93
NOD1-202ENST00000411552 ALDH1B1P30837 517 aa20.86■□□□□ 0.93
NOD1-202ENST00000411552 RTL5Q5HYW3 569 aaPredicted RBP20.86■□□□□ 0.93
NOD1-202ENST00000411552 CWC25Q9NXE8 425 aaPredicted RBP20.86■□□□□ 0.93
NOD1-202ENST00000411552 FER1L6Q2WGJ9 1857 aa20.86■□□□□ 0.93
NOD1-202ENST00000411552 RASSF7Q02833 373 aa20.85■□□□□ 0.93
NOD1-202ENST00000411552 NEXNQ0ZGT2 675 aa20.85■□□□□ 0.93
NOD1-202ENST00000411552 ZBTB38Q8NAP3 1195 aaPredicted RBP20.85■□□□□ 0.93
NOD1-202ENST00000411552 C7orf43Q8WVR3 580 aa20.85■□□□□ 0.93
NOD1-202ENST00000411552 CWF19L2Q2TBE0 894 aaKnown RBP20.84■□□□□ 0.93
NOD1-202ENST00000411552 DNAAF4Q8WXU2 420 aa20.84■□□□□ 0.93
NOD1-202ENST00000411552 RBM17Q96I25 401 aaKnown RBP20.84■□□□□ 0.93
NOD1-202ENST00000411552 NEURL1BA8MQ27 555 aa20.83■□□□□ 0.93
NOD1-202ENST00000411552 NFKBIEO00221 500 aa20.83■□□□□ 0.93
NOD1-202ENST00000411552 IRS4O14654 1257 aaPredicted RBP20.83■□□□□ 0.93
NOD1-202ENST00000411552 PCCAP05165 728 aaPredicted RBP20.83■□□□□ 0.93
NOD1-202ENST00000411552 ZNF784Q8NCA9 323 aaPredicted RBP20.83■□□□□ 0.93
NOD1-202ENST00000411552 CRAMP1Q96RY5 1269 aa20.83■□□□□ 0.93
NOD1-202ENST00000411552 F6X3S4 739 aa20.82■□□□□ 0.92
NOD1-202ENST00000411552 SOGA3Q5TF21 947 aa20.82■□□□□ 0.92
NOD1-202ENST00000411552 C9orf131Q5VYM1 1079 aa20.82■□□□□ 0.92
NOD1-202ENST00000411552 OLFM4Q6UX06 510 aa20.82■□□□□ 0.92
NOD1-202ENST00000411552 MRPL50Q8N5N7 158 aaKnown RBP20.82■□□□□ 0.92
NOD1-202ENST00000411552 SSH1Q8WYL5 1049 aa20.82■□□□□ 0.92
NOD1-202ENST00000411552 JARID2Q92833 1246 aaPredicted RBP20.82■□□□□ 0.92
NOD1-202ENST00000411552 CCDC88AQ3V6T2 1871 aa20.81■□□□□ 0.92
NOD1-202ENST00000411552 TAF1P21675 1872 aa20.81■□□□□ 0.92
NOD1-202ENST00000411552 ABCC4O15439 1325 aa20.8■□□□□ 0.92
NOD1-202ENST00000411552 CT47B1P0C2W7 299 aaPredicted RBP20.8■□□□□ 0.92
NOD1-202ENST00000411552 PRELPP51888 382 aa20.8■□□□□ 0.92
NOD1-202ENST00000411552 CCDC93Q567U6 631 aa20.8■□□□□ 0.92
NOD1-202ENST00000411552 LINS1Q8NG48 757 aa20.8■□□□□ 0.92
NOD1-202ENST00000411552 BCL2L13Q9BXK5 485 aa20.8■□□□□ 0.92
NOD1-202ENST00000411552 RNF181Q9P0P0 153 aa20.8■□□□□ 0.92
NOD1-202ENST00000411552 PPEF1O14829 653 aaPredicted RBP20.79■□□□□ 0.92
NOD1-202ENST00000411552 LMNB1P20700 586 aa20.79■□□□□ 0.92
NOD1-202ENST00000411552 GCKRQ14397 625 aa20.79■□□□□ 0.92
NOD1-202ENST00000411552 SF3B3Q15393 1217 aaKnown RBP20.79■□□□□ 0.92
NOD1-202ENST00000411552 ALDH1L2Q3SY69 923 aa20.79■□□□□ 0.92
NOD1-202ENST00000411552 LTBP3Q9NS15 1303 aa20.78■□□□□ 0.92
NOD1-202ENST00000411552 HSP90B1P14625 803 aaKnown RBP20.78■□□□□ 0.92
NOD1-202ENST00000411552 DDX46Q7L014 1031 aaKnown RBP20.78■□□□□ 0.92
NOD1-202ENST00000411552 SLC51AQ86UW1 340 aa20.78■□□□□ 0.92
NOD1-202ENST00000411552 TAOK3Q9H2K8 898 aa20.78■□□□□ 0.92
NOD1-202ENST00000411552 CDHR2Q9BYE9 1310 aa20.78■□□□□ 0.92
NOD1-202ENST00000411552 BEND3Q5T5X7 828 aa20.77■□□□□ 0.92
NOD1-202ENST00000411552 SMC4Q9NTJ3 1288 aa20.77■□□□□ 0.92
NOD1-202ENST00000411552 SNED1Q8TER0 1413 aa20.77■□□□□ 0.91
NOD1-202ENST00000411552 ZBED9Q6R2W3 1325 aa20.77■□□□□ 0.91
NOD1-202ENST00000411552 H7C1W4 665 aa20.76■□□□□ 0.91
NOD1-202ENST00000411552 PDE8AO60658 829 aa20.76■□□□□ 0.91
NOD1-202ENST00000411552 UBE3BQ7Z3V4 1068 aa20.76■□□□□ 0.91
NOD1-202ENST00000411552 RTKN2Q8IZC4 609 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms