RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 SLC4A9Q96Q91 983 aa5.02□□□□□ -1.61
RNU6-1140P-201ENST00000410517 BRD7Q9NPI1 651 aa5.02□□□□□ -1.61
RNU6-1140P-201ENST00000410517 INTS5Q6P9B9 1019 aaKnown RBP5.01□□□□□ -1.61
RNU6-1140P-201ENST00000410517 POU5F2Q8N7G0 328 aa5.01□□□□□ -1.61
RNU6-1140P-201ENST00000410517 L3MBTL2Q969R5 705 aa5.01□□□□□ -1.61
RNU6-1140P-201ENST00000410517 DNAJB12Q9NXW2 375 aaKnown RBP5.01□□□□□ -1.61
RNU6-1140P-201ENST00000410517 KCNH4Q9UQ05 1017 aa5.01□□□□□ -1.61
RNU6-1140P-201ENST00000410517 RAXQ9Y2V3 346 aa5.01□□□□□ -1.61
RNU6-1140P-201ENST00000410517 APBB1O00213 710 aa5□□□□□ -1.61
RNU6-1140P-201ENST00000410517 SLFNL1Q499Z3 407 aa5□□□□□ -1.61
RNU6-1140P-201ENST00000410517 FBLN7Q53RD9 439 aa5□□□□□ -1.61
RNU6-1140P-201ENST00000410517 ZDHHC1Q8WTX9 485 aa5□□□□□ -1.61
RNU6-1140P-201ENST00000410517 STOML1Q9UBI4 398 aa5□□□□□ -1.61
RNU6-1140P-201ENST00000410517 NAGPAQ9UK23 515 aa5□□□□□ -1.61
RNU6-1140P-201ENST00000410517 SFI1A8K8P3 1242 aa4.99□□□□□ -1.61
RNU6-1140P-201ENST00000410517 TMEM229AB2RXF0 380 aa4.99□□□□□ -1.61
RNU6-1140P-201ENST00000410517 EML1O00423 815 aa4.99□□□□□ -1.61
RNU6-1140P-201ENST00000410517 DTX1Q86Y01 620 aa4.99□□□□□ -1.61
RNU6-1140P-201ENST00000410517 WFDC8Q8IUA0 241 aa4.99□□□□□ -1.61
RNU6-1140P-201ENST00000410517 ZDHHC13Q8IUH4 622 aa4.99□□□□□ -1.61
RNU6-1140P-201ENST00000410517 PHTF2Q8N3S3 785 aa4.99□□□□□ -1.61
RNU6-1140P-201ENST00000410517 ZNF232Q9UNY5 417 aa4.99□□□□□ -1.61
RNU6-1140P-201ENST00000410517 KCNQ4P56696 695 aa4.98□□□□□ -1.61
RNU6-1140P-201ENST00000410517 RHPN1Q8TCX5 695 aa4.98□□□□□ -1.61
RNU6-1140P-201ENST00000410517 FAM117AQ9C073 453 aa4.98□□□□□ -1.61
RNU6-1140P-201ENST00000410517 PRM3Q9NNZ6 103 aa4.98□□□□□ -1.61
RNU6-1140P-201ENST00000410517 GPC6Q9Y625 555 aaPredicted RBP4.98□□□□□ -1.61
RNU6-1140P-201ENST00000410517 DEAF1O75398 565 aaPredicted RBP4.97□□□□□ -1.61
RNU6-1140P-201ENST00000410517 NOS2P35228 1153 aa4.97□□□□□ -1.61
RNU6-1140P-201ENST00000410517 FAM35AQ86V20 835 aa4.97□□□□□ -1.61
RNU6-1140P-201ENST00000410517 WWC1Q8IX03 1113 aa4.97□□□□□ -1.61
RNU6-1140P-201ENST00000410517 ABI1Q8IZP0 508 aa4.97□□□□□ -1.61
RNU6-1140P-201ENST00000410517 C7orf43Q8WVR3 580 aa4.97□□□□□ -1.61
RNU6-1140P-201ENST00000410517 ASIC4Q96FT7 647 aa4.97□□□□□ -1.61
RNU6-1140P-201ENST00000410517 TIMELESSQ9UNS1 1208 aa4.97□□□□□ -1.61
RNU6-1140P-201ENST00000410517 F8W735 103 aaPredicted RBP4.96□□□□□ -1.62
RNU6-1140P-201ENST00000410517 DLL1O00548 723 aa4.96□□□□□ -1.62
RNU6-1140P-201ENST00000410517 CPB1P15086 417 aa4.96□□□□□ -1.62
RNU6-1140P-201ENST00000410517 GLB1P16278 677 aa4.96□□□□□ -1.62
RNU6-1140P-201ENST00000410517 TEAD4Q15561 434 aa4.96□□□□□ -1.62
RNU6-1140P-201ENST00000410517 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
RNU6-1140P-201ENST00000410517 HSH2DQ96JZ2 352 aa4.96□□□□□ -1.62
RNU6-1140P-201ENST00000410517 MRPL18Q9H0U6 180 aaKnown RBP4.96□□□□□ -1.62
RNU6-1140P-201ENST00000410517 GPR37L1O60883 481 aa4.95□□□□□ -1.62
RNU6-1140P-201ENST00000410517 TYRO3Q06418 890 aa4.95□□□□□ -1.62
RNU6-1140P-201ENST00000410517 NFIAQ12857 509 aa4.95□□□□□ -1.62
RNU6-1140P-201ENST00000410517 TMEM130Q8N3G9 435 aa4.95□□□□□ -1.62
RNU6-1140P-201ENST00000410517 PNMA5Q96PV4 448 aa4.95□□□□□ -1.62
RNU6-1140P-201ENST00000410517 SCHIP1Q9P0W5 487 aaPredicted RBP4.95□□□□□ -1.62
RNU6-1140P-201ENST00000410517 ANKIB1Q9P2G1 1089 aa4.95□□□□□ -1.62
RNU6-1140P-201ENST00000410517 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
RNU6-1140P-201ENST00000410517 BACH1O14867 736 aa4.94□□□□□ -1.62
RNU6-1140P-201ENST00000410517 DHX15O43143 795 aaKnown RBP4.94□□□□□ -1.62
RNU6-1140P-201ENST00000410517 PLAURQ03405 335 aa4.94□□□□□ -1.62
RNU6-1140P-201ENST00000410517 GRIK5Q16478 980 aa4.94□□□□□ -1.62
RNU6-1140P-201ENST00000410517 TBCELQ5QJ74 424 aa4.94□□□□□ -1.62
RNU6-1140P-201ENST00000410517 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
RNU6-1140P-201ENST00000410517 AGGF1Q8N302 714 aaeCLIP4.94□□□□□ -1.62
RNU6-1140P-201ENST00000410517 NDUFB9Q9Y6M9 179 aa4.94□□□□□ -1.62
RNU6-1140P-201ENST00000410517 SERTM1A2A2V5 107 aa4.93□□□□□ -1.62
RNU6-1140P-201ENST00000410517 PRR19A6NJB7 356 aa4.93□□□□□ -1.62
RNU6-1140P-201ENST00000410517 RAD21O60216 631 aa4.93□□□□□ -1.62
RNU6-1140P-201ENST00000410517 PERM1Q5SV97 790 aa4.93□□□□□ -1.62
RNU6-1140P-201ENST00000410517 SH3PXD2AQ5TCZ1 1133 aa4.93□□□□□ -1.62
RNU6-1140P-201ENST00000410517 ELMSAN1Q6PJG2 1045 aa4.93□□□□□ -1.62
RNU6-1140P-201ENST00000410517 SPOCD1Q6ZMY3 1216 aa4.93□□□□□ -1.62
RNU6-1140P-201ENST00000410517 ZNF280CQ8ND82 737 aa4.93□□□□□ -1.62
RNU6-1140P-201ENST00000410517 CHIC2Q9UKJ5 165 aa4.93□□□□□ -1.62
RNU6-1140P-201ENST00000410517 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.93□□□□□ -1.62
RNU6-1140P-201ENST00000410517 NFKB1P19838 968 aa4.92□□□□□ -1.62
RNU6-1140P-201ENST00000410517 EIF4G2P78344 907 aaKnown RBP eCLIP4.92□□□□□ -1.62
RNU6-1140P-201ENST00000410517 ZNF124Q15973 351 aa4.92□□□□□ -1.62
RNU6-1140P-201ENST00000410517 ZNF648Q5T619 568 aaPredicted RBP4.92□□□□□ -1.62
RNU6-1140P-201ENST00000410517 TRIM42Q8IWZ5 723 aa4.92□□□□□ -1.62
RNU6-1140P-201ENST00000410517 UBL7Q96S82 380 aaPredicted RBP4.92□□□□□ -1.62
RNU6-1140P-201ENST00000410517 LPIN3Q9BQK8 851 aa4.92□□□□□ -1.62
RNU6-1140P-201ENST00000410517 UBTFP17480 764 aaKnown RBP4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 PCSK7Q16549 785 aa4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 RNF43Q68DV7 783 aa4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 Q6ZS46 218 aa4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 SLC9A9Q8IVB4 645 aa4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 SUSD3Q96L08 255 aa4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 DBNDD2Q9BQY9 259 aa4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 C7orf69Q9H7B7 122 aa4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 EFCC1Q9HA90 598 aa4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 FRRS1LQ9P0K9 344 aa4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 ANGEL1Q9UNK9 670 aaKnown RBP4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 HCN4Q9Y3Q4 1203 aa4.91□□□□□ -1.62
RNU6-1140P-201ENST00000410517 HMX2A2RU54 273 aa4.9□□□□□ -1.63
RNU6-1140P-201ENST00000410517 DBX1A6NMT0 343 aa4.9□□□□□ -1.63
RNU6-1140P-201ENST00000410517 MLLT1Q03111 559 aaPredicted RBP4.9□□□□□ -1.63
RNU6-1140P-201ENST00000410517 MAP7D1Q3KQU3 841 aa4.9□□□□□ -1.63
RNU6-1140P-201ENST00000410517 BANK1Q8NDB2 785 aa4.9□□□□□ -1.63
RNU6-1140P-201ENST00000410517 ARXQ96QS3 562 aa4.9□□□□□ -1.63
RNU6-1140P-201ENST00000410517 GSX2Q9BZM3 304 aa4.9□□□□□ -1.63
RNU6-1140P-201ENST00000410517 ZMYND15Q9H091 742 aa4.9□□□□□ -1.63
RNU6-1140P-201ENST00000410517 CCINQ13939 588 aa4.89□□□□□ -1.63
RNU6-1140P-201ENST00000410517 C1orf53Q5VUE5 145 aa4.89□□□□□ -1.63
RNU6-1140P-201ENST00000410517 ARMC10Q8N2F6 343 aa4.89□□□□□ -1.63
RNU6-1140P-201ENST00000410517 PLPP7Q8NBV4 271 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms