RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.64■□□□□ 0.42
MINDY4-202ENST00000409881 TRAPPC3LQ5T215 181 aa17.64■□□□□ 0.42
MINDY4-202ENST00000409881 BEND3Q5T5X7 828 aa17.64■□□□□ 0.42
MINDY4-202ENST00000409881 PDZRN3Q9UPQ7 1066 aa17.64■□□□□ 0.42
MINDY4-202ENST00000409881 PCDHB15Q9Y5E8 787 aa17.64■□□□□ 0.42
MINDY4-202ENST00000409881 NUP188Q5SRE5 1749 aa17.64■□□□□ 0.41
MINDY4-202ENST00000409881 HLFQ16534 295 aa17.64■□□□□ 0.41
MINDY4-202ENST00000409881 ARHGEF1Q92888 912 aaKnown RBP17.64■□□□□ 0.41
MINDY4-202ENST00000409881 AKT1S1Q96B36 256 aa17.64■□□□□ 0.41
MINDY4-202ENST00000409881 DDX19BQ9UMR2 479 aa17.64■□□□□ 0.41
MINDY4-202ENST00000409881 ATP5J2-PTCD1G3V325 749 aa17.63■□□□□ 0.41
MINDY4-202ENST00000409881 CAMTA2O94983 1202 aa17.63■□□□□ 0.41
MINDY4-202ENST00000409881 CWF19L2Q2TBE0 894 aaKnown RBP17.63■□□□□ 0.41
MINDY4-202ENST00000409881 UBR3Q6ZT12 1888 aa17.63■□□□□ 0.41
MINDY4-202ENST00000409881 ATP10DQ9P241 1426 aa17.63■□□□□ 0.41
MINDY4-202ENST00000409881 MRE11P49959 708 aa17.63■□□□□ 0.41
MINDY4-202ENST00000409881 ERVV-1B6SEH8 477 aa17.62■□□□□ 0.41
MINDY4-202ENST00000409881 RFC4P35249 363 aa17.62■□□□□ 0.41
MINDY4-202ENST00000409881 LINS1Q8NG48 757 aa17.62■□□□□ 0.41
MINDY4-202ENST00000409881 SRP68Q9UHB9 627 aaKnown RBP17.62■□□□□ 0.41
MINDY4-202ENST00000409881 ZPR1O75312 459 aa17.62■□□□□ 0.41
MINDY4-202ENST00000409881 IGKV5-2P06315 115 aa17.62■□□□□ 0.41
MINDY4-202ENST00000409881 ADRA2BP18089 450 aa17.62■□□□□ 0.41
MINDY4-202ENST00000409881 SSFA2P28290 1259 aa17.62■□□□□ 0.41
MINDY4-202ENST00000409881 GIGYF2Q6Y7W6 1299 aaKnown RBP17.62■□□□□ 0.41
MINDY4-202ENST00000409881 STK32BQ9NY57 414 aa17.61■□□□□ 0.41
MINDY4-202ENST00000409881 CHMP5Q9NZZ3 219 aa17.61■□□□□ 0.41
MINDY4-202ENST00000409881 NARFQ9UHQ1 456 aa17.61■□□□□ 0.41
MINDY4-202ENST00000409881 TCIRG1Q13488 830 aa17.61■□□□□ 0.41
MINDY4-202ENST00000409881 USPL1Q5W0Q7 1092 aa17.61■□□□□ 0.41
MINDY4-202ENST00000409881 GRPEL1Q9HAV7 217 aa17.61■□□□□ 0.41
MINDY4-202ENST00000409881 NEURL1BA8MQ27 555 aa17.6■□□□□ 0.41
MINDY4-202ENST00000409881 ALDH1L1O75891 902 aa17.6■□□□□ 0.41
MINDY4-202ENST00000409881 GPTP24298 496 aa17.6■□□□□ 0.41
MINDY4-202ENST00000409881 N4BP2Q86UW6 1770 aaPredicted RBP17.6■□□□□ 0.41
MINDY4-202ENST00000409881 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
MINDY4-202ENST00000409881 ZNF652Q9Y2D9 606 aa17.6■□□□□ 0.41
MINDY4-202ENST00000409881 C4AP0C0L4 1744 aa17.6■□□□□ 0.41
MINDY4-202ENST00000409881 ESPNB1AK53 854 aa17.59■□□□□ 0.41
MINDY4-202ENST00000409881 ZBTB7BO15156 539 aaPredicted RBP17.59■□□□□ 0.41
MINDY4-202ENST00000409881 SLC15A2Q16348 729 aa17.59■□□□□ 0.41
MINDY4-202ENST00000409881 MEIS3Q99687 375 aa17.59■□□□□ 0.41
MINDY4-202ENST00000409881 USP42Q9H9J4 1324 aaKnown RBP17.59■□□□□ 0.41
MINDY4-202ENST00000409881 BCORQ6W2J9 1755 aa17.58■□□□□ 0.41
MINDY4-202ENST00000409881 SCN7AQ01118 1682 aa17.58■□□□□ 0.41
MINDY4-202ENST00000409881 NUP98P52948 1817 aa17.58■□□□□ 0.4
MINDY4-202ENST00000409881 MFAP1P55081 439 aaKnown RBP17.58■□□□□ 0.4
MINDY4-202ENST00000409881 ISCA1Q9BUE6 129 aa17.58■□□□□ 0.4
MINDY4-202ENST00000409881 CHMP4BQ9H444 224 aaKnown RBP17.58■□□□□ 0.4
MINDY4-202ENST00000409881 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.4
MINDY4-202ENST00000409881 TUBGCP6Q96RT7 1819 aa17.57■□□□□ 0.4
MINDY4-202ENST00000409881 GCKRQ14397 625 aa17.57■□□□□ 0.4
MINDY4-202ENST00000409881 C22orf23Q9BZE7 217 aa17.57■□□□□ 0.4
MINDY4-202ENST00000409881 USP44Q9H0E7 712 aa17.57■□□□□ 0.4
MINDY4-202ENST00000409881 BCL2L12Q9HB09 334 aa17.57■□□□□ 0.4
MINDY4-202ENST00000409881 CWC25Q9NXE8 425 aaPredicted RBP17.57■□□□□ 0.4
MINDY4-202ENST00000409881 AFDNP55196 1824 aaKnown RBP17.57■□□□□ 0.4
MINDY4-202ENST00000409881 PNPLA7Q6ZV29 1317 aa17.57■□□□□ 0.4
MINDY4-202ENST00000409881 COL23A1Q86Y22 540 aaPredicted RBP17.57■□□□□ 0.4
MINDY4-202ENST00000409881 C1orf115Q9H7X2 142 aa17.57■□□□□ 0.4
MINDY4-202ENST00000409881 ZBTB40Q9NUA8 1239 aa17.57■□□□□ 0.4
MINDY4-202ENST00000409881 CLEC4GQ6UXB4 293 aa17.56■□□□□ 0.4
MINDY4-202ENST00000409881 BICDL1Q6ZP65 573 aa17.56■□□□□ 0.4
MINDY4-202ENST00000409881 FLAD1Q8NFF5 587 aa17.56■□□□□ 0.4
MINDY4-202ENST00000409881 NIP7Q9Y221 180 aaKnown RBP eCLIP17.56■□□□□ 0.4
MINDY4-202ENST00000409881 CCDC191Q8NCU4 936 aa17.56■□□□□ 0.4
MINDY4-202ENST00000409881 JARID2Q92833 1246 aaPredicted RBP17.56■□□□□ 0.4
MINDY4-202ENST00000409881 GRM8O00222 908 aa17.55■□□□□ 0.4
MINDY4-202ENST00000409881 NBPF7P0C2Y1 421 aaPredicted RBP17.55■□□□□ 0.4
MINDY4-202ENST00000409881 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
MINDY4-202ENST00000409881 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
MINDY4-202ENST00000409881 ZNF34Q8IZ26 560 aa17.55■□□□□ 0.4
MINDY4-202ENST00000409881 ANKRD36CQ5JPF3 1778 aa17.55■□□□□ 0.4
MINDY4-202ENST00000409881 UBN2Q6ZU65 1347 aa17.55■□□□□ 0.4
MINDY4-202ENST00000409881 GNAI3P08754 354 aa17.55■□□□□ 0.4
MINDY4-202ENST00000409881 TBC1D9BQ66K14 1250 aa17.55■□□□□ 0.4
MINDY4-202ENST00000409881 FAM177BA6PVY3 158 aa17.54■□□□□ 0.4
MINDY4-202ENST00000409881 TRIM28Q13263 835 aaKnown RBP17.54■□□□□ 0.4
MINDY4-202ENST00000409881 RGL2O15211 777 aa17.54■□□□□ 0.4
MINDY4-202ENST00000409881 UBE3BQ7Z3V4 1068 aa17.54■□□□□ 0.4
MINDY4-202ENST00000409881 RWDD1Q9H446 243 aaPredicted RBP17.54■□□□□ 0.4
MINDY4-202ENST00000409881 GYS1P13807 737 aa17.53■□□□□ 0.4
MINDY4-202ENST00000409881 TRIM44Q96DX7 344 aaPredicted RBP17.53■□□□□ 0.4
MINDY4-202ENST00000409881 DDX11L8A8MPP1 907 aa17.53■□□□□ 0.4
MINDY4-202ENST00000409881 AAMPQ13685 434 aa17.53■□□□□ 0.4
MINDY4-202ENST00000409881 GNAI2P04899 355 aa17.52■□□□□ 0.4
MINDY4-202ENST00000409881 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.4
MINDY4-202ENST00000409881 PARP10Q53GL7 1025 aa17.52■□□□□ 0.39
MINDY4-202ENST00000409881 SUSD4Q5VX71 490 aa17.52■□□□□ 0.39
MINDY4-202ENST00000409881 SETDB2Q96T68 719 aa17.52■□□□□ 0.39
MINDY4-202ENST00000409881 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.39
MINDY4-202ENST00000409881 IBTKQ9P2D0 1353 aaPredicted RBP17.51■□□□□ 0.39
MINDY4-202ENST00000409881 GAS2L3Q86XJ1 694 aa17.51■□□□□ 0.39
MINDY4-202ENST00000409881 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
MINDY4-202ENST00000409881 FAM89AQ96GI7 184 aa17.5■□□□□ 0.39
MINDY4-202ENST00000409881 UTYO14607 1347 aa17.5■□□□□ 0.39
MINDY4-202ENST00000409881 H7C1W4 665 aa17.5■□□□□ 0.39
MINDY4-202ENST00000409881 NFIXQ14938 502 aa17.5■□□□□ 0.39
MINDY4-202ENST00000409881 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
MINDY4-202ENST00000409881 PPP1R42Q7Z4L9 355 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms