RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 IBTKQ9P2D0 1353 aaPredicted RBP26.09■■□□□ 1.77
C4orf48-202ENST00000409860 FAM177BA6PVY3 158 aa26.09■■□□□ 1.77
C4orf48-202ENST00000409860 NPHP1O15259 732 aa26.09■■□□□ 1.77
C4orf48-202ENST00000409860 SUSD4Q5VX71 490 aa26.09■■□□□ 1.77
C4orf48-202ENST00000409860 UTP14AQ9BVJ6 771 aaKnown RBP26.09■■□□□ 1.77
C4orf48-202ENST00000409860 ANKRD36CQ5JPF3 1778 aa26.08■■□□□ 1.77
C4orf48-202ENST00000409860 TPTE2Q6XPS3 522 aa26.08■■□□□ 1.77
C4orf48-202ENST00000409860 INTS3Q68E01 1043 aaKnown RBP26.07■■□□□ 1.76
C4orf48-202ENST00000409860 CNBD1Q8NA66 436 aa26.07■■□□□ 1.76
C4orf48-202ENST00000409860 TRMT112Q9UI30 125 aaKnown RBP26.07■■□□□ 1.76
C4orf48-202ENST00000409860 RNF123Q5XPI4 1314 aa26.07■■□□□ 1.76
C4orf48-202ENST00000409860 NTSR2O95665 410 aa26.06■■□□□ 1.76
C4orf48-202ENST00000409860 GTF2E1P29083 439 aaPredicted RBP26.06■■□□□ 1.76
C4orf48-202ENST00000409860 GCKRQ14397 625 aa26.06■■□□□ 1.76
C4orf48-202ENST00000409860 SGIP1Q9BQI5 828 aa26.06■■□□□ 1.76
C4orf48-202ENST00000409860 COL24A1Q17RW2 1714 aa26.05■■□□□ 1.76
C4orf48-202ENST00000409860 PTGER2P43116 358 aa26.05■■□□□ 1.76
C4orf48-202ENST00000409860 PDE3AQ14432 1141 aa26.05■■□□□ 1.76
C4orf48-202ENST00000409860 TMEM57Q8N5G2 664 aa26.05■■□□□ 1.76
C4orf48-202ENST00000409860 SUPT16HQ9Y5B9 1047 aaKnown RBP26.05■■□□□ 1.76
C4orf48-202ENST00000409860 RLBP1P12271 317 aa26.04■■□□□ 1.76
C4orf48-202ENST00000409860 ST5P78524 1137 aa26.04■■□□□ 1.76
C4orf48-202ENST00000409860 ZBTB38Q8NAP3 1195 aaPredicted RBP26.04■■□□□ 1.76
C4orf48-202ENST00000409860 PANK1Q8TE04 598 aa26.04■■□□□ 1.76
C4orf48-202ENST00000409860 SH3TC1Q8TE82 1336 aa26.04■■□□□ 1.76
C4orf48-202ENST00000409860 PCCAP05165 728 aaPredicted RBP26.03■■□□□ 1.76
C4orf48-202ENST00000409860 PRR5LQ6MZQ0 368 aa26.03■■□□□ 1.76
C4orf48-202ENST00000409860 NUTM1Q86Y26 1132 aa26.02■■□□□ 1.76
C4orf48-202ENST00000409860 ITPRIPQ8IWB1 547 aa26.02■■□□□ 1.76
C4orf48-202ENST00000409860 C9orf78Q9NZ63 289 aaPredicted RBP26.02■■□□□ 1.76
C4orf48-202ENST00000409860 GRM8O00222 908 aa26.01■■□□□ 1.75
C4orf48-202ENST00000409860 ERFEQ4G0M1 354 aa26■■□□□ 1.75
C4orf48-202ENST00000409860 FAM89AQ96GI7 184 aa26■■□□□ 1.75
C4orf48-202ENST00000409860 H7C1W4 665 aa25.99■■□□□ 1.75
C4orf48-202ENST00000409860 HSP90B1P14625 803 aaKnown RBP25.99■■□□□ 1.75
C4orf48-202ENST00000409860 RTL5Q5HYW3 569 aaPredicted RBP25.99■■□□□ 1.75
C4orf48-202ENST00000409860 C20orf194Q5TEA3 1177 aa25.99■■□□□ 1.75
C4orf48-202ENST00000409860 UBE3BQ7Z3V4 1068 aa25.99■■□□□ 1.75
C4orf48-202ENST00000409860 AFDNP55196 1824 aaKnown RBP25.98■■□□□ 1.75
C4orf48-202ENST00000409860 N4BP2Q86UW6 1770 aaPredicted RBP25.97■■□□□ 1.75
C4orf48-202ENST00000409860 NRXN2Q9P2S2 1712 aa25.97■■□□□ 1.75
C4orf48-202ENST00000409860 ABCC12Q96J65 1359 aa25.97■■□□□ 1.75
C4orf48-202ENST00000409860 CDHR2Q9BYE9 1310 aa25.97■■□□□ 1.75
C4orf48-202ENST00000409860 IRS4O14654 1257 aaPredicted RBP25.97■■□□□ 1.75
C4orf48-202ENST00000409860 MVPQ14764 893 aaKnown RBP25.97■■□□□ 1.75
C4orf48-202ENST00000409860 CCDC24Q8N4L8 307 aa25.97■■□□□ 1.75
C4orf48-202ENST00000409860 JARID2Q92833 1246 aaPredicted RBP25.97■■□□□ 1.75
C4orf48-202ENST00000409860 COG6Q9Y2V7 657 aa25.97■■□□□ 1.75
C4orf48-202ENST00000409860 C10orf71Q711Q0 1435 aa25.97■■□□□ 1.75
C4orf48-202ENST00000409860 SLC10A5Q5PT55 438 aa25.96■■□□□ 1.75
C4orf48-202ENST00000409860 USP44Q9H0E7 712 aa25.96■■□□□ 1.75
C4orf48-202ENST00000409860 PPP1R1BQ9UD71 204 aaPredicted RBP25.96■■□□□ 1.75
C4orf48-202ENST00000409860 UTYO14607 1347 aa25.95■■□□□ 1.75
C4orf48-202ENST00000409860 CASP7P55210 303 aa25.95■■□□□ 1.74
C4orf48-202ENST00000409860 SYNE4Q8N205 404 aa25.95■■□□□ 1.74
C4orf48-202ENST00000409860 BRIP1Q9BX63 1249 aa25.95■■□□□ 1.74
C4orf48-202ENST00000409860 DDX19BQ9UMR2 479 aa25.95■■□□□ 1.74
C4orf48-202ENST00000409860 RIC1Q4ADV7 1423 aa25.95■■□□□ 1.74
C4orf48-202ENST00000409860 GNAI3P08754 354 aa25.94■■□□□ 1.74
C4orf48-202ENST00000409860 NBPF7P0C2Y1 421 aaPredicted RBP25.94■■□□□ 1.74
C4orf48-202ENST00000409860 UBTFL1P0CB47 393 aaPredicted RBP25.94■■□□□ 1.74
C4orf48-202ENST00000409860 HCLS1P14317 486 aaPredicted RBP25.94■■□□□ 1.74
C4orf48-202ENST00000409860 MEIS3Q99687 375 aa25.94■■□□□ 1.74
C4orf48-202ENST00000409860 CHMP4BQ9H444 224 aaKnown RBP25.94■■□□□ 1.74
C4orf48-202ENST00000409860 HDAC5Q9UQL6 1122 aa25.94■■□□□ 1.74
C4orf48-202ENST00000409860 KLHL34Q8N239 644 aa25.93■■□□□ 1.74
C4orf48-202ENST00000409860 PDE6BP35913 854 aa25.92■■□□□ 1.74
C4orf48-202ENST00000409860 NLRP3Q96P20 1036 aa25.92■■□□□ 1.74
C4orf48-202ENST00000409860 CD2APQ9Y5K6 639 aa25.92■■□□□ 1.74
C4orf48-202ENST00000409860 PDE8AO60658 829 aa25.91■■□□□ 1.74
C4orf48-202ENST00000409860 PLA2G12BQ9BX93 195 aa25.91■■□□□ 1.74
C4orf48-202ENST00000409860 PDZRN3Q9UPQ7 1066 aa25.9■■□□□ 1.74
C4orf48-202ENST00000409860 LRP5O75197 1615 aa25.89■■□□□ 1.74
C4orf48-202ENST00000409860 ZBTB7BO15156 539 aaPredicted RBP25.89■■□□□ 1.74
C4orf48-202ENST00000409860 SUCLG2Q96I99 432 aa25.89■■□□□ 1.74
C4orf48-202ENST00000409860 KLRG2A4D1S0 409 aaPredicted RBP25.87■■□□□ 1.73
C4orf48-202ENST00000409860 GNAI2P04899 355 aa25.87■■□□□ 1.73
C4orf48-202ENST00000409860 CTSWP56202 376 aa25.87■■□□□ 1.73
C4orf48-202ENST00000409860 CRBNQ96SW2 442 aa25.87■■□□□ 1.73
C4orf48-202ENST00000409860 H0YIN7 160 aa25.86■■□□□ 1.73
C4orf48-202ENST00000409860 TGFB2P61812 414 aa25.86■■□□□ 1.73
C4orf48-202ENST00000409860 C3orf67Q6ZVT6 689 aa25.86■■□□□ 1.73
C4orf48-202ENST00000409860 C2CD5Q86YS7 1000 aa25.86■■□□□ 1.73
C4orf48-202ENST00000409860 LRRFIP2Q9Y608 721 aaKnown RBP25.86■■□□□ 1.73
C4orf48-202ENST00000409860 SF3B3Q15393 1217 aaKnown RBP25.85■■□□□ 1.73
C4orf48-202ENST00000409860 CRY2Q49AN0 593 aa25.85■■□□□ 1.73
C4orf48-202ENST00000409860 CCDC152Q4G0S7 254 aa25.85■■□□□ 1.73
C4orf48-202ENST00000409860 RPGRQ92834 1020 aaKnown RBP25.85■■□□□ 1.73
C4orf48-202ENST00000409860 FHDC1Q9C0D6 1143 aaPredicted RBP25.85■■□□□ 1.73
C4orf48-202ENST00000409860 LAMB2P55268 1798 aa25.84■■□□□ 1.73
C4orf48-202ENST00000409860 TNRC6CQ9HCJ0 1690 aaKnown RBP25.84■■□□□ 1.73
C4orf48-202ENST00000409860 FOXO4P98177 505 aa25.84■■□□□ 1.73
C4orf48-202ENST00000409860 BICC1Q9H694 974 aaKnown RBP25.84■■□□□ 1.73
C4orf48-202ENST00000409860 DDX60Q8IY21 1712 aaKnown RBP25.83■■□□□ 1.73
C4orf48-202ENST00000409860 EPHA10Q5JZY3 1008 aa25.83■■□□□ 1.73
C4orf48-202ENST00000409860 TTLL11Q8NHH1 800 aa25.83■■□□□ 1.73
C4orf48-202ENST00000409860 KAZALD1Q96I82 304 aa25.83■■□□□ 1.73
C4orf48-202ENST00000409860 SRGNP10124 158 aa25.82■■□□□ 1.72
C4orf48-202ENST00000409860 NPR1P16066 1061 aa25.82■■□□□ 1.72
C4orf48-202ENST00000409860 CHRNA5P30532 468 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms