RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 HAND2P61296 217 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 NFRKBQ6P4R8 1299 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 ZC3H18Q86VM9 953 aaKnown RBP4.7□□□□□ -1.66
RGPD1-202ENST00000409776 GBP5Q96PP8 586 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 GRPEL1Q9HAV7 217 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 LMAN1P49257 510 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 PRPF4BQ13523 1007 aaKnown RBP4.7□□□□□ -1.66
RGPD1-202ENST00000409776 RINLQ6ZS11 566 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 PROM2Q8N271 834 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 HELLSQ9NRZ9 838 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 DKK3Q9UBP4 350 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 LRRFIP2Q9Y608 721 aaKnown RBP4.7□□□□□ -1.66
RGPD1-202ENST00000409776 MS4A1P11836 297 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 ECE1P42892 770 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 ST13P5Q8NFI4 369 aaPredicted RBP4.7□□□□□ -1.66
RGPD1-202ENST00000409776 SEC62Q99442 399 aaKnown RBP4.7□□□□□ -1.66
RGPD1-202ENST00000409776 NUF2Q9BZD4 464 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 UBE2OQ9C0C9 1292 aaKnown RBP4.7□□□□□ -1.66
RGPD1-202ENST00000409776 CHRAC1Q9NRG0 131 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 S100A9P06702 114 aaKnown RBP4.7□□□□□ -1.66
RGPD1-202ENST00000409776 NUP62P37198 522 aaPredicted RBP4.7□□□□□ -1.66
RGPD1-202ENST00000409776 PSMD7P51665 324 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 NONOQ15233 471 aaKnown RBP eCLIP4.7□□□□□ -1.66
RGPD1-202ENST00000409776 AHI1Q8N157 1196 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 TMCO5AQ8N6Q1 288 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 KIF17Q9P2E2 1029 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 KDM1AO60341 852 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 INAQ16352 499 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 CCDC102BQ68D86 513 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 CEP85Q6P2H3 762 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 PPP1R21Q6ZMI0 780 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 TEX9Q8N6V9 391 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 PPP1R14DQ9NXH3 145 aa4.7□□□□□ -1.66
RGPD1-202ENST00000409776 GOLGA8RI6L899 631 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 LMNB1P20700 586 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 CCND1P24385 295 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 PHLDB3Q6NSJ2 640 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 ZNF428Q96B54 188 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 A0A1B0GW55 424 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 GSTTP1A0A1W2PQM5 241 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 DUX4L2P0CJ85 424 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 DUX4L3P0CJ86 424 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 DUX4L4P0CJ87 422 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 DUX4L5P0CJ88 424 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 DUX4L6P0CJ89 424 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 DUX4L7P0CJ90 424 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 PEX19P40855 299 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 CTCFLQ8NI51 663 aaPredicted RBP4.69□□□□□ -1.66
RGPD1-202ENST00000409776 PPP1R14AQ96A00 147 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 COQ7Q99807 217 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 CNGB3Q9NQW8 809 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 DUX4Q9UBX2 424 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 RSPH14Q9UHP6 348 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 SKILP12757 684 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 PIP4K2BP78356 416 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 BIRC2Q13490 618 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 SPECC1Q5M775 1068 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 HEATR3Q7Z4Q2 680 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 TEKT4Q8WW24 435 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 HVCN1Q96D96 273 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 EFHD1Q9BUP0 239 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 HARSP12081 509 aaKnown RBP4.69□□□□□ -1.66
RGPD1-202ENST00000409776 KRT4P19013 534 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 HLTFQ14527 1009 aaKnown RBP eCLIP4.69□□□□□ -1.66
RGPD1-202ENST00000409776 LUZP2Q86TE4 346 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 ANKRD13AQ8IZ07 590 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 RASEFQ8IZ41 740 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 PIBF1Q8WXW3 757 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 LARP6Q9BRS8 491 aaKnown RBP4.69□□□□□ -1.66
RGPD1-202ENST00000409776 TRIM6Q9C030 488 aaPredicted RBP4.69□□□□□ -1.66
RGPD1-202ENST00000409776 STMN3Q9NZ72 180 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 EMC3Q9P0I2 261 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 BCAP29Q9UHQ4 241 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 MSH5O43196 834 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 SLU7O95391 586 aaKnown RBP4.69□□□□□ -1.66
RGPD1-202ENST00000409776 KRT75O95678 551 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 KIF11P52732 1056 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 POLGP54098 1239 aaPredicted RBP4.69□□□□□ -1.66
RGPD1-202ENST00000409776 LETM2Q2VYF4 491 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 ZNF280BQ86YH2 543 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 UBXN4Q92575 508 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 RUBCNQ92622 972 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 SH3GL3Q99963 347 aa4.69□□□□□ -1.66
RGPD1-202ENST00000409776 CETN3O15182 167 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 MCM3P25205 808 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 PMS1P54277 932 aaKnown RBP4.68□□□□□ -1.66
RGPD1-202ENST00000409776 KRT73Q86Y46 540 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 MAML1Q92585 1016 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 GOLGA1Q92805 767 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 JAKMIP1Q96N16 626 aaKnown RBP4.68□□□□□ -1.66
RGPD1-202ENST00000409776 TACO1Q9BSH4 297 aaKnown RBP4.68□□□□□ -1.66
RGPD1-202ENST00000409776 COG4Q9H9E3 785 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 PRC1O43663 620 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 PDE9AO76083 593 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 KRT8P05787 483 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 IGBP1P78318 339 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 XPCQ01831 940 aaPredicted RBP4.68□□□□□ -1.66
RGPD1-202ENST00000409776 NBPF20Q3BBV1 942 aa4.68□□□□□ -1.66
RGPD1-202ENST00000409776 SYTL4Q96C24 671 aaPredicted RBP4.68□□□□□ -1.66
RGPD1-202ENST00000409776 RAB3IPQ96QF0 476 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms