RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CCDC191Q8NCU4 936 aa24.4■■□□□ 1.5
USP39-204ENST00000409766 ATG3Q9NT62 314 aa24.4■■□□□ 1.5
USP39-204ENST00000409766 LMBR1LQ6UX01 489 aa24.4■■□□□ 1.5
USP39-204ENST00000409766 RUFY2Q8WXA3 655 aa24.4■■□□□ 1.5
USP39-204ENST00000409766 TEX13AQ9BXU3 409 aaPredicted RBP24.4■■□□□ 1.5
USP39-204ENST00000409766 CWC22Q9HCG8 908 aaKnown RBP24.4■■□□□ 1.5
USP39-204ENST00000409766 PHLPP1O60346 1717 aa24.4■■□□□ 1.5
USP39-204ENST00000409766 GBP4Q96PP9 640 aa24.39■■□□□ 1.5
USP39-204ENST00000409766 LRP6O75581 1613 aa24.38■■□□□ 1.49
USP39-204ENST00000409766 KIAA1211Q6ZU35 1233 aa24.38■■□□□ 1.49
USP39-204ENST00000409766 IL27Q8NEV9 243 aa24.38■■□□□ 1.49
USP39-204ENST00000409766 WNK3Q9BYP7 1800 aa24.38■■□□□ 1.49
USP39-204ENST00000409766 SSFA2P28290 1259 aa24.37■■□□□ 1.49
USP39-204ENST00000409766 TFCP2Q12800 502 aa24.37■■□□□ 1.49
USP39-204ENST00000409766 CLEC17AQ6ZS10 378 aa24.37■■□□□ 1.49
USP39-204ENST00000409766 DNAJC10Q8IXB1 793 aa24.37■■□□□ 1.49
USP39-204ENST00000409766 TMX3Q96JJ7 454 aa24.37■■□□□ 1.49
USP39-204ENST00000409766 BCL9O00512 1426 aa24.37■■□□□ 1.49
USP39-204ENST00000409766 TOM1O60784 492 aa24.37■■□□□ 1.49
USP39-204ENST00000409766 TNNI3KQ59H18 835 aa24.37■■□□□ 1.49
USP39-204ENST00000409766 FPGT-TNNI3KV9GXZ4 949 aa24.37■■□□□ 1.49
USP39-204ENST00000409766 TRAK2O60296 914 aa24.36■■□□□ 1.49
USP39-204ENST00000409766 ZGPATQ8N5A5 531 aaKnown RBP24.36■■□□□ 1.49
USP39-204ENST00000409766 NUCB2P80303 420 aa24.35■■□□□ 1.49
USP39-204ENST00000409766 ISCA1Q9BUE6 129 aa24.35■■□□□ 1.49
USP39-204ENST00000409766 BOLA2Q9H3K6 86 aa24.35■■□□□ 1.49
USP39-204ENST00000409766 DBNLQ9UJU6 430 aaKnown RBP24.35■■□□□ 1.49
USP39-204ENST00000409766 EXOC5O00471 708 aa24.35■■□□□ 1.49
USP39-204ENST00000409766 CYP2E1P05181 493 aaPredicted RBP24.35■■□□□ 1.49
USP39-204ENST00000409766 SNX14Q9Y5W7 946 aa24.35■■□□□ 1.49
USP39-204ENST00000409766 HIP1O00291 1037 aa24.34■■□□□ 1.49
USP39-204ENST00000409766 STARD3NLO95772 234 aa24.34■■□□□ 1.49
USP39-204ENST00000409766 UPF3BQ9BZI7 483 aaKnown RBP24.34■■□□□ 1.49
USP39-204ENST00000409766 TCIRG1Q13488 830 aa24.34■■□□□ 1.49
USP39-204ENST00000409766 CUL4AQ13619 759 aa24.34■■□□□ 1.49
USP39-204ENST00000409766 PIP4K2BP78356 416 aa24.33■■□□□ 1.49
USP39-204ENST00000409766 ATP5JP18859 108 aa24.32■■□□□ 1.48
USP39-204ENST00000409766 PTH1RQ03431 593 aa24.32■■□□□ 1.48
USP39-204ENST00000409766 RASEFQ8IZ41 740 aa24.32■■□□□ 1.48
USP39-204ENST00000409766 CHMP3Q9Y3E7 222 aa24.32■■□□□ 1.48
USP39-204ENST00000409766 KAT6BQ8WYB5 2073 aa24.32■■□□□ 1.48
USP39-204ENST00000409766 TRIM28Q13263 835 aaKnown RBP24.32■■□□□ 1.48
USP39-204ENST00000409766 SNRKQ9NRH2 765 aa24.32■■□□□ 1.48
USP39-204ENST00000409766 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.32■■□□□ 1.48
USP39-204ENST00000409766 ATG9AQ7Z3C6 839 aa24.31■■□□□ 1.48
USP39-204ENST00000409766 PKP1Q13835 747 aa24.3■■□□□ 1.48
USP39-204ENST00000409766 FAM227BQ96M60 508 aa24.3■■□□□ 1.48
USP39-204ENST00000409766 SLC4A9Q96Q91 983 aa24.3■■□□□ 1.48
USP39-204ENST00000409766 ZNF330Q9Y3S2 320 aaPredicted RBP24.3■■□□□ 1.48
USP39-204ENST00000409766 NMIQ13287 307 aaPredicted RBP24.3■■□□□ 1.48
USP39-204ENST00000409766 KIF6Q6ZMV9 814 aa24.3■■□□□ 1.48
USP39-204ENST00000409766 FSD1Q9BTV5 496 aa24.3■■□□□ 1.48
USP39-204ENST00000409766 NRAPQ86VF7 1730 aa24.29■■□□□ 1.48
USP39-204ENST00000409766 KCNB2Q92953 911 aa24.29■■□□□ 1.48
USP39-204ENST00000409766 INTS4Q96HW7 963 aaKnown RBP24.28■■□□□ 1.48
USP39-204ENST00000409766 DBNDD2Q9BQY9 259 aa24.28■■□□□ 1.48
USP39-204ENST00000409766 CCDC171Q6TFL3 1326 aa24.28■■□□□ 1.48
USP39-204ENST00000409766 BAG4O95429 457 aaKnown RBP24.28■■□□□ 1.48
USP39-204ENST00000409766 CYP19A1P11511 503 aaPredicted RBP24.28■■□□□ 1.48
USP39-204ENST00000409766 PTMSP20962 102 aa24.28■■□□□ 1.48
USP39-204ENST00000409766 TTC14Q96N46 770 aa24.27■■□□□ 1.48
USP39-204ENST00000409766 MAP3K15Q6ZN16 1313 aa24.27■■□□□ 1.48
USP39-204ENST00000409766 A0A0D9SFI3 127 aa24.27■■□□□ 1.48
USP39-204ENST00000409766 IL15P40933 162 aaPredicted RBP24.27■■□□□ 1.48
USP39-204ENST00000409766 NECTIN1Q15223 517 aa24.27■■□□□ 1.48
USP39-204ENST00000409766 CDCA7Q9BWT1 371 aaPredicted RBP24.27■■□□□ 1.48
USP39-204ENST00000409766 GPR108Q9NPR9 543 aa24.27■■□□□ 1.48
USP39-204ENST00000409766 SPATA31A1Q5TZJ5 1347 aa24.27■■□□□ 1.47
USP39-204ENST00000409766 DOT1LQ8TEK3 1739 aa24.26■■□□□ 1.47
USP39-204ENST00000409766 ADAMTS2O95450 1211 aa24.26■■□□□ 1.47
USP39-204ENST00000409766 NOL8Q76FK4 1167 aaKnown RBP24.26■■□□□ 1.47
USP39-204ENST00000409766 MAP4K1Q92918 833 aa24.26■■□□□ 1.47
USP39-204ENST00000409766 ZDHHC9Q9Y397 364 aa24.26■■□□□ 1.47
USP39-204ENST00000409766 EYA2O00167 538 aa24.25■■□□□ 1.47
USP39-204ENST00000409766 GIGYF2Q6Y7W6 1299 aaKnown RBP24.25■■□□□ 1.47
USP39-204ENST00000409766 SYTL4Q96C24 671 aaPredicted RBP24.25■■□□□ 1.47
USP39-204ENST00000409766 EDC3Q96F86 508 aaKnown RBP24.25■■□□□ 1.47
USP39-204ENST00000409766 THRAP3Q9Y2W1 955 aaKnown RBP24.25■■□□□ 1.47
USP39-204ENST00000409766 MED23Q9ULK4 1368 aa24.25■■□□□ 1.47
USP39-204ENST00000409766 UBAP1LF5GYI3 381 aa24.25■■□□□ 1.47
USP39-204ENST00000409766 CIAO1O76071 339 aa24.25■■□□□ 1.47
USP39-204ENST00000409766 PCCAP05165 728 aaPredicted RBP24.25■■□□□ 1.47
USP39-204ENST00000409766 PRIM1P49642 420 aaKnown RBP24.25■■□□□ 1.47
USP39-204ENST00000409766 PRPF40BQ6NWY9 871 aaKnown RBP24.25■■□□□ 1.47
USP39-204ENST00000409766 ZNF594Q96JF6 807 aaPredicted RBP24.24■■□□□ 1.47
USP39-204ENST00000409766 HAUS7Q99871 368 aa24.24■■□□□ 1.47
USP39-204ENST00000409766 GZF1Q9H116 711 aaPredicted RBP24.24■■□□□ 1.47
USP39-204ENST00000409766 SKOR2Q2VWA4 1001 aaPredicted RBP24.23■■□□□ 1.47
USP39-204ENST00000409766 LRRC24Q50LG9 513 aa24.23■■□□□ 1.47
USP39-204ENST00000409766 PLA2G12BQ9BX93 195 aa24.23■■□□□ 1.47
USP39-204ENST00000409766 RFX7Q2KHR2 1363 aa24.23■■□□□ 1.47
USP39-204ENST00000409766 GOLGA6L22H0YM25 854 aa24.23■■□□□ 1.47
USP39-204ENST00000409766 ZBTB38Q8NAP3 1195 aaPredicted RBP24.23■■□□□ 1.47
USP39-204ENST00000409766 TM6SF1Q9BZW5 370 aa24.23■■□□□ 1.47
USP39-204ENST00000409766 RBM8AQ9Y5S9 174 aaKnown RBP24.23■■□□□ 1.47
USP39-204ENST00000409766 HLFQ16534 295 aa24.22■■□□□ 1.47
USP39-204ENST00000409766 FAM89AQ96GI7 184 aa24.22■■□□□ 1.47
USP39-204ENST00000409766 JCADQ9P266 1359 aa24.22■■□□□ 1.47
USP39-204ENST00000409766 CASTP20810 708 aaKnown RBP24.22■■□□□ 1.47
USP39-204ENST00000409766 AK2P54819 239 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms