RNA–Protein interactions for RNA: ENST00000409557.5

RND3-203, Transcript of Rho family GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene RND3, Length 2,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND3-203ENST00000409557 MX1P20591 662 aa11.31□□□□□ -0.6
RND3-203ENST00000409557 PDE1AP54750 535 aa11.31□□□□□ -0.6
RND3-203ENST00000409557 HSP90AB3PQ58FF7 597 aa11.31□□□□□ -0.6
RND3-203ENST00000409557 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
RND3-203ENST00000409557 NOP58Q9Y2X3 529 aaKnown RBP11.31□□□□□ -0.6
RND3-203ENST00000409557 FOXO4P98177 505 aa11.31□□□□□ -0.6
RND3-203ENST00000409557 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
RND3-203ENST00000409557 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
RND3-203ENST00000409557 ERVV-1B6SEH8 477 aa11.3□□□□□ -0.6
RND3-203ENST00000409557 MFAP1P55081 439 aaKnown RBP11.3□□□□□ -0.6
RND3-203ENST00000409557 NLRP10Q86W26 655 aa11.3□□□□□ -0.6
RND3-203ENST00000409557 TRMT112Q9UI30 125 aaKnown RBP11.3□□□□□ -0.6
RND3-203ENST00000409557 TRIM28Q13263 835 aaKnown RBP11.3□□□□□ -0.6
RND3-203ENST00000409557 RABL6Q3YEC7 729 aaPredicted RBP11.3□□□□□ -0.6
RND3-203ENST00000409557 ERC1Q8IUD2 1116 aa11.3□□□□□ -0.6
RND3-203ENST00000409557 CLASRPQ8N2M8 674 aaKnown RBP11.3□□□□□ -0.6
RND3-203ENST00000409557 ZBTB38Q8NAP3 1195 aaPredicted RBP11.3□□□□□ -0.6
RND3-203ENST00000409557 UPF2Q9HAU5 1272 aaKnown RBP11.3□□□□□ -0.6
RND3-203ENST00000409557 NHSQ6T4R5 1651 aa11.29□□□□□ -0.6
RND3-203ENST00000409557 COL15A1P39059 1388 aa11.29□□□□□ -0.6
RND3-203ENST00000409557 TRIM37O94972 964 aa11.29□□□□□ -0.6
RND3-203ENST00000409557 CAMTA2O94983 1202 aa11.29□□□□□ -0.6
RND3-203ENST00000409557 PCCAP05165 728 aaPredicted RBP11.29□□□□□ -0.6
RND3-203ENST00000409557 RBM6P78332 1123 aaKnown RBP11.29□□□□□ -0.6
RND3-203ENST00000409557 BCL11BQ9C0K0 894 aaPredicted RBP11.29□□□□□ -0.6
RND3-203ENST00000409557 NUP98P52948 1817 aa11.29□□□□□ -0.6
RND3-203ENST00000409557 SDSP20132 328 aa11.28□□□□□ -0.6
RND3-203ENST00000409557 FAM196AQ6ZSG2 479 aa11.28□□□□□ -0.6
RND3-203ENST00000409557 UBN2Q6ZU65 1347 aa11.28□□□□□ -0.6
RND3-203ENST00000409557 GNPATO15228 680 aa11.28□□□□□ -0.6
RND3-203ENST00000409557 SASH1O94885 1247 aa11.28□□□□□ -0.6
RND3-203ENST00000409557 IFIT2P09913 472 aaKnown RBP11.28□□□□□ -0.6
RND3-203ENST00000409557 PTPN12Q05209 780 aaKnown RBP11.28□□□□□ -0.6
RND3-203ENST00000409557 AACSQ86V21 672 aa11.28□□□□□ -0.6
RND3-203ENST00000409557 SBF2Q86WG5 1849 aa11.28□□□□□ -0.6
RND3-203ENST00000409557 BRWD3Q6RI45 1802 aa11.27□□□□□ -0.6
RND3-203ENST00000409557 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.6
RND3-203ENST00000409557 RFX5P48382 616 aaPredicted RBP11.27□□□□□ -0.6
RND3-203ENST00000409557 TBC1D9Q6ZT07 1266 aa11.27□□□□□ -0.6
RND3-203ENST00000409557 RILPL2Q969X0 211 aa11.27□□□□□ -0.6
RND3-203ENST00000409557 OSBPL3Q9H4L5 887 aa11.27□□□□□ -0.6
RND3-203ENST00000409557 NIP7Q9Y221 180 aaKnown RBP eCLIP11.27□□□□□ -0.6
RND3-203ENST00000409557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.27□□□□□ -0.6
RND3-203ENST00000409557 SALL3Q9BXA9 1300 aa11.27□□□□□ -0.6
RND3-203ENST00000409557 IRS4O14654 1257 aaPredicted RBP11.27□□□□□ -0.61
RND3-203ENST00000409557 CDC45O75419 566 aa11.27□□□□□ -0.61
RND3-203ENST00000409557 ZNF34Q8IZ26 560 aa11.27□□□□□ -0.61
RND3-203ENST00000409557 ZNF594Q96JF6 807 aaPredicted RBP11.27□□□□□ -0.61
RND3-203ENST00000409557 CNTNAP4Q9C0A0 1308 aa11.27□□□□□ -0.61
RND3-203ENST00000409557 COL5A3P25940 1745 aaPredicted RBP11.27□□□□□ -0.61
RND3-203ENST00000409557 PHF14O94880 888 aa11.26□□□□□ -0.61
RND3-203ENST00000409557 MAP4K4O95819 1239 aaPredicted RBP11.26□□□□□ -0.61
RND3-203ENST00000409557 RXRBP28702 533 aa11.26□□□□□ -0.61
RND3-203ENST00000409557 CCDC57Q2TAC2 916 aa11.26□□□□□ -0.61
RND3-203ENST00000409557 SUSD4Q5VX71 490 aa11.26□□□□□ -0.61
RND3-203ENST00000409557 BICDL1Q6ZP65 573 aa11.26□□□□□ -0.61
RND3-203ENST00000409557 CCDC8Q9H0W5 538 aaPredicted RBP11.26□□□□□ -0.61
RND3-203ENST00000409557 COPRSQ9NQ92 184 aa11.26□□□□□ -0.61
RND3-203ENST00000409557 TFCP2Q12800 502 aa11.26□□□□□ -0.61
RND3-203ENST00000409557 TAF7LQ5H9L4 462 aa11.26□□□□□ -0.61
RND3-203ENST00000409557 ZNF652Q9Y2D9 606 aa11.26□□□□□ -0.61
RND3-203ENST00000409557 RTCBQ9Y3I0 505 aaKnown RBP11.26□□□□□ -0.61
RND3-203ENST00000409557 STAP2Q9UGK3 403 aa11.25□□□□□ -0.61
RND3-203ENST00000409557 ANKRD36CQ5JPF3 1778 aa11.25□□□□□ -0.61
RND3-203ENST00000409557 ZPR1O75312 459 aa11.25□□□□□ -0.61
RND3-203ENST00000409557 RPS6KA4O75676 772 aa11.25□□□□□ -0.61
RND3-203ENST00000409557 HCLS1P14317 486 aaPredicted RBP11.25□□□□□ -0.61
RND3-203ENST00000409557 RC3H1Q5TC82 1133 aaKnown RBP11.25□□□□□ -0.61
RND3-203ENST00000409557 EAF2Q96CJ1 260 aaPredicted RBP11.25□□□□□ -0.61
RND3-203ENST00000409557 AK7Q96M32 723 aa11.25□□□□□ -0.61
RND3-203ENST00000409557 UTP14AQ9BVJ6 771 aaKnown RBP11.25□□□□□ -0.61
RND3-203ENST00000409557 LRRC4BQ9NT99 713 aa11.25□□□□□ -0.61
RND3-203ENST00000409557 SRP68Q9UHB9 627 aaKnown RBP11.25□□□□□ -0.61
RND3-203ENST00000409557 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
RND3-203ENST00000409557 RREB1Q92766 1687 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 IFIT5Q13325 482 aaKnown RBP11.24□□□□□ -0.61
RND3-203ENST00000409557 USPL1Q5W0Q7 1092 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 GPATCH3Q96I76 525 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 IPO9Q96P70 1041 aaKnown RBP11.24□□□□□ -0.61
RND3-203ENST00000409557 TLR7Q9NYK1 1049 aaKnown RBP11.24□□□□□ -0.61
RND3-203ENST00000409557 CTSWP56202 376 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 LRRC24Q50LG9 513 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 AMIGO3Q86WK7 504 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 PI4K2BQ8TCG2 481 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 PLA2G12BQ9BX93 195 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 PUS3Q9BZE2 481 aaKnown RBP11.24□□□□□ -0.61
RND3-203ENST00000409557 SH3TC1Q8TE82 1336 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 CDHR2Q9BYE9 1310 aa11.24□□□□□ -0.61
RND3-203ENST00000409557 ZNF831Q5JPB2 1677 aa11.23□□□□□ -0.61
RND3-203ENST00000409557 PDE8AO60658 829 aa11.23□□□□□ -0.61
RND3-203ENST00000409557 ITGA6P23229 1130 aa11.23□□□□□ -0.61
RND3-203ENST00000409557 PARP10Q53GL7 1025 aa11.23□□□□□ -0.61
RND3-203ENST00000409557 TTLL11Q8NHH1 800 aa11.23□□□□□ -0.61
RND3-203ENST00000409557 GREM2Q9H772 168 aa11.23□□□□□ -0.61
RND3-203ENST00000409557 ERC2O15083 957 aa11.23□□□□□ -0.61
RND3-203ENST00000409557 RFC4P35249 363 aa11.23□□□□□ -0.61
RND3-203ENST00000409557 AOX1Q06278 1338 aa11.23□□□□□ -0.61
RND3-203ENST00000409557 CLEC4GQ6UXB4 293 aa11.23□□□□□ -0.61
RND3-203ENST00000409557 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms