RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 CCDC85AQ96PX6 553 aaPredicted RBP19.52■□□□□ 0.72
SHANK2-204ENST00000409530 NIP7Q9Y221 180 aaKnown RBP eCLIP19.52■□□□□ 0.72
SHANK2-204ENST00000409530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.51■□□□□ 0.71
SHANK2-204ENST00000409530 ERVV-1B6SEH8 477 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 ZPR1O75312 459 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 HSP90AB3PQ58FF7 597 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 NLRP10Q86W26 655 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 ARHGEF1Q92888 912 aaKnown RBP19.51■□□□□ 0.71
SHANK2-204ENST00000409530 LNPKQ9C0E8 428 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 RFC4P35249 363 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 EZH2Q15910 746 aaKnown RBP19.51■□□□□ 0.71
SHANK2-204ENST00000409530 ANKRD45Q5TZF3 282 aa19.51■□□□□ 0.71
SHANK2-204ENST00000409530 TRMT112Q9UI30 125 aaKnown RBP19.51■□□□□ 0.71
SHANK2-204ENST00000409530 MSH5O43196 834 aa19.5■□□□□ 0.71
SHANK2-204ENST00000409530 ZNF827Q17R98 1081 aa19.5■□□□□ 0.71
SHANK2-204ENST00000409530 UTYO14607 1347 aa19.5■□□□□ 0.71
SHANK2-204ENST00000409530 ATP8B2P98198 1209 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 TRAPPC3LQ5T215 181 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 DEFB132Q7Z7B7 95 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 ZNF652Q9Y2D9 606 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 PLSCR1O15162 318 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 SMARCA5O60264 1052 aaPredicted RBP19.49■□□□□ 0.71
SHANK2-204ENST00000409530 SF3B2Q13435 895 aaKnown RBP19.49■□□□□ 0.71
SHANK2-204ENST00000409530 KLHDC4Q8TBB5 520 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 TFCP2L1Q9NZI6 479 aa19.49■□□□□ 0.71
SHANK2-204ENST00000409530 PA2G4Q9UQ80 394 aaKnown RBP19.49■□□□□ 0.71
SHANK2-204ENST00000409530 TUBGCP6Q96RT7 1819 aa19.48■□□□□ 0.71
SHANK2-204ENST00000409530 SMC5Q8IY18 1101 aa19.48■□□□□ 0.71
SHANK2-204ENST00000409530 CASP7P55210 303 aa19.48■□□□□ 0.71
SHANK2-204ENST00000409530 NUTM1Q86Y26 1132 aa19.48■□□□□ 0.71
SHANK2-204ENST00000409530 SIL1Q9H173 461 aa19.48■□□□□ 0.71
SHANK2-204ENST00000409530 H7C1W4 665 aa19.47■□□□□ 0.71
SHANK2-204ENST00000409530 SUSD4Q5VX71 490 aa19.47■□□□□ 0.71
SHANK2-204ENST00000409530 TBC1D9BQ66K14 1250 aa19.47■□□□□ 0.71
SHANK2-204ENST00000409530 ZNF34Q8IZ26 560 aa19.47■□□□□ 0.71
SHANK2-204ENST00000409530 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
SHANK2-204ENST00000409530 LMBR1LQ6UX01 489 aa19.46■□□□□ 0.71
SHANK2-204ENST00000409530 GCC1Q96CN9 775 aa19.46■□□□□ 0.71
SHANK2-204ENST00000409530 BCL2L12Q9HB09 334 aa19.46■□□□□ 0.71
SHANK2-204ENST00000409530 SURF6O75683 361 aaKnown RBP19.46■□□□□ 0.71
SHANK2-204ENST00000409530 OS9Q13438 667 aaPredicted RBP19.46■□□□□ 0.71
SHANK2-204ENST00000409530 CCDC24Q8N4L8 307 aa19.45■□□□□ 0.7
SHANK2-204ENST00000409530 ZBTB38Q8NAP3 1195 aaPredicted RBP19.45■□□□□ 0.7
SHANK2-204ENST00000409530 DCTPP1Q9H773 170 aa19.45■□□□□ 0.7
SHANK2-204ENST00000409530 ZBTB47Q9UFB7 747 aaPredicted RBP19.45■□□□□ 0.7
SHANK2-204ENST00000409530 HDAC5Q9UQL6 1122 aa19.45■□□□□ 0.7
SHANK2-204ENST00000409530 USP42Q9H9J4 1324 aaKnown RBP19.45■□□□□ 0.7
SHANK2-204ENST00000409530 SSH3Q8TE77 659 aa19.45■□□□□ 0.7
SHANK2-204ENST00000409530 RGPD3A6NKT7 1758 aaPredicted RBP19.44■□□□□ 0.7
SHANK2-204ENST00000409530 RGPD4Q7Z3J3 1758 aa19.44■□□□□ 0.7
SHANK2-204ENST00000409530 PCCAP05165 728 aaPredicted RBP19.44■□□□□ 0.7
SHANK2-204ENST00000409530 HCLS1P14317 486 aaPredicted RBP19.44■□□□□ 0.7
SHANK2-204ENST00000409530 CHD1LQ86WJ1 897 aa19.44■□□□□ 0.7
SHANK2-204ENST00000409530 IRS4O14654 1257 aaPredicted RBP19.43■□□□□ 0.7
SHANK2-204ENST00000409530 NPHP1O15259 732 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 NUCB1Q02818 461 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 TRIM28Q13263 835 aaKnown RBP19.43■□□□□ 0.7
SHANK2-204ENST00000409530 PDE4AP27815 886 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 FOXO4P98177 505 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 POLA2Q14181 598 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 UTP14AQ9BVJ6 771 aaKnown RBP19.43■□□□□ 0.7
SHANK2-204ENST00000409530 ANO8Q9HCE9 1232 aaPredicted RBP19.43■□□□□ 0.7
SHANK2-204ENST00000409530 MYH3P11055 1940 aa19.43■□□□□ 0.7
SHANK2-204ENST00000409530 BAG6P46379 1132 aa19.42■□□□□ 0.7
SHANK2-204ENST00000409530 IL1RAPL2Q9NP60 686 aa19.42■□□□□ 0.7
SHANK2-204ENST00000409530 SSFA2P28290 1259 aa19.42■□□□□ 0.7
SHANK2-204ENST00000409530 GTF2E1P29083 439 aaPredicted RBP19.42■□□□□ 0.7
SHANK2-204ENST00000409530 FAM161AQ3B820 660 aa19.42■□□□□ 0.7
SHANK2-204ENST00000409530 SH3TC1Q8TE82 1336 aa19.41■□□□□ 0.7
SHANK2-204ENST00000409530 CAMKK2Q96RR4 588 aa19.41■□□□□ 0.7
SHANK2-204ENST00000409530 SETDB2Q96T68 719 aa19.41■□□□□ 0.7
SHANK2-204ENST00000409530 DDX60Q8IY21 1712 aaKnown RBP19.41■□□□□ 0.7
SHANK2-204ENST00000409530 NTSR2O95665 410 aa19.4■□□□□ 0.7
SHANK2-204ENST00000409530 MTX1Q13505 466 aa19.4■□□□□ 0.7
SHANK2-204ENST00000409530 PARP10Q53GL7 1025 aa19.4■□□□□ 0.7
SHANK2-204ENST00000409530 CLEC4GQ6UXB4 293 aa19.4■□□□□ 0.7
SHANK2-204ENST00000409530 C16orf71Q8IYS4 520 aaPredicted RBP19.4■□□□□ 0.7
SHANK2-204ENST00000409530 ZNF594Q96JF6 807 aaPredicted RBP19.4■□□□□ 0.7
SHANK2-204ENST00000409530 OTUD7AQ8TE49 926 aaPredicted RBP19.4■□□□□ 0.7
SHANK2-204ENST00000409530 AKT1S1Q96B36 256 aa19.4■□□□□ 0.7
SHANK2-204ENST00000409530 IBTKQ9P2D0 1353 aaPredicted RBP19.39■□□□□ 0.7
SHANK2-204ENST00000409530 ADRA2BP18089 450 aa19.39■□□□□ 0.69
SHANK2-204ENST00000409530 ERFEQ4G0M1 354 aa19.39■□□□□ 0.69
SHANK2-204ENST00000409530 NBPF5PQ86XG9 351 aaPredicted RBP19.39■□□□□ 0.69
SHANK2-204ENST00000409530 CASZ1Q86V15 1759 aa19.39■□□□□ 0.69
SHANK2-204ENST00000409530 RABL6Q3YEC7 729 aaPredicted RBP19.39■□□□□ 0.69
SHANK2-204ENST00000409530 MSL1Q68DK7 614 aa19.39■□□□□ 0.69
SHANK2-204ENST00000409530 LRRCC1Q9C099 1032 aa19.39■□□□□ 0.69
SHANK2-204ENST00000409530 GYS1P13807 737 aa19.38■□□□□ 0.69
SHANK2-204ENST00000409530 CTSWP56202 376 aa19.38■□□□□ 0.69
SHANK2-204ENST00000409530 COL24A1Q17RW2 1714 aa19.38■□□□□ 0.69
SHANK2-204ENST00000409530 COL23A1Q86Y22 540 aaPredicted RBP19.38■□□□□ 0.69
SHANK2-204ENST00000409530 CDHR2Q9BYE9 1310 aa19.38■□□□□ 0.69
SHANK2-204ENST00000409530 GREM2Q9H772 168 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 ABCC12Q96J65 1359 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 NFIXQ14938 502 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 TAF7LQ5H9L4 462 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 TSHZ3Q63HK5 1081 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 SPEF2Q9C093 1822 aa19.37■□□□□ 0.69
SHANK2-204ENST00000409530 LAMB2P55268 1798 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms