RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 CRAMP1Q96RY5 1269 aa11.2□□□□□ -0.62
VWA3B-201ENST00000409460 NOP58Q9Y2X3 529 aaKnown RBP11.2□□□□□ -0.62
VWA3B-201ENST00000409460 ZNF831Q5JPB2 1677 aa11.2□□□□□ -0.62
VWA3B-201ENST00000409460 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
VWA3B-201ENST00000409460 HDGFL1Q5TGJ6 251 aa11.19□□□□□ -0.62
VWA3B-201ENST00000409460 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
VWA3B-201ENST00000409460 TUBGCP6Q96RT7 1819 aa11.19□□□□□ -0.62
VWA3B-201ENST00000409460 TMEM88BA6NKF7 163 aa11.19□□□□□ -0.62
VWA3B-201ENST00000409460 KCNA3P22001 575 aa11.19□□□□□ -0.62
VWA3B-201ENST00000409460 MPNDQ8N594 471 aa11.19□□□□□ -0.62
VWA3B-201ENST00000409460 CTCFP49711 727 aaPredicted RBP11.19□□□□□ -0.62
VWA3B-201ENST00000409460 BCL2L12Q9HB09 334 aa11.19□□□□□ -0.62
VWA3B-201ENST00000409460 GNAI1P63096 354 aa11.19□□□□□ -0.62
VWA3B-201ENST00000409460 CEMIPQ8WUJ3 1361 aa11.19□□□□□ -0.62
VWA3B-201ENST00000409460 ZNF277Q9NRM2 450 aaPredicted RBP11.19□□□□□ -0.62
VWA3B-201ENST00000409460 HYPKQ9NX55 129 aa11.18□□□□□ -0.62
VWA3B-201ENST00000409460 SH3TC1Q8TE82 1336 aa11.18□□□□□ -0.62
VWA3B-201ENST00000409460 CAPN15O75808 1086 aa11.18□□□□□ -0.62
VWA3B-201ENST00000409460 MAP2K1Q02750 393 aaPredicted RBP11.18□□□□□ -0.62
VWA3B-201ENST00000409460 GPC2Q8N158 579 aa11.18□□□□□ -0.62
VWA3B-201ENST00000409460 PIP4K2AP48426 406 aaPredicted RBP11.18□□□□□ -0.62
VWA3B-201ENST00000409460 DDX10Q13206 875 aaKnown RBP11.18□□□□□ -0.62
VWA3B-201ENST00000409460 GRM1Q13255 1194 aa11.18□□□□□ -0.62
VWA3B-201ENST00000409460 DDNO94850 711 aaPredicted RBP11.18□□□□□ -0.62
VWA3B-201ENST00000409460 GIGYF2Q6Y7W6 1299 aaKnown RBP11.18□□□□□ -0.62
VWA3B-201ENST00000409460 PSMD1Q99460 953 aa11.18□□□□□ -0.62
VWA3B-201ENST00000409460 IBTKQ9P2D0 1353 aaPredicted RBP11.17□□□□□ -0.62
VWA3B-201ENST00000409460 C6orf229H3BNL8 230 aa11.17□□□□□ -0.62
VWA3B-201ENST00000409460 MIS18AQ9NYP9 233 aa11.17□□□□□ -0.62
VWA3B-201ENST00000409460 NFKBIEO00221 500 aa11.17□□□□□ -0.62
VWA3B-201ENST00000409460 DBF4Q9UBU7 674 aaPredicted RBP11.17□□□□□ -0.62
VWA3B-201ENST00000409460 MKRN1Q9UHC7 482 aaKnown RBP11.17□□□□□ -0.62
VWA3B-201ENST00000409460 KCNQ3O43525 872 aa11.17□□□□□ -0.62
VWA3B-201ENST00000409460 CIAPIN1Q6FI81 312 aa11.17□□□□□ -0.62
VWA3B-201ENST00000409460 HOXB7P09629 217 aa11.16□□□□□ -0.62
VWA3B-201ENST00000409460 HSPA1AP0DMV8 641 aaKnown RBP11.16□□□□□ -0.62
VWA3B-201ENST00000409460 HSPA1BP0DMV9 641 aaKnown RBP11.16□□□□□ -0.62
VWA3B-201ENST00000409460 EIF4A1P60842 406 aaKnown RBP11.16□□□□□ -0.62
VWA3B-201ENST00000409460 DEFB115Q30KQ5 88 aa11.16□□□□□ -0.62
VWA3B-201ENST00000409460 TAF1DQ9H5J8 278 aaPredicted RBP11.16□□□□□ -0.62
VWA3B-201ENST00000409460 COL24A1Q17RW2 1714 aa11.16□□□□□ -0.62
VWA3B-201ENST00000409460 NF2P35240 595 aa11.15□□□□□ -0.62
VWA3B-201ENST00000409460 USP50Q70EL3 339 aaPredicted RBP11.15□□□□□ -0.62
VWA3B-201ENST00000409460 NUTM1Q86Y26 1132 aa11.15□□□□□ -0.62
VWA3B-201ENST00000409460 NECTIN2Q92692 538 aa11.15□□□□□ -0.62
VWA3B-201ENST00000409460 TMPOP42166 694 aaKnown RBP11.15□□□□□ -0.63
VWA3B-201ENST00000409460 CCDC30Q5VVM6 783 aa11.15□□□□□ -0.63
VWA3B-201ENST00000409460 CFAP44Q96MT7 982 aa11.15□□□□□ -0.63
VWA3B-201ENST00000409460 KCNJ4P48050 445 aa11.14□□□□□ -0.63
VWA3B-201ENST00000409460 ZC3H12CQ9C0D7 883 aaKnown RBP11.14□□□□□ -0.63
VWA3B-201ENST00000409460 DDX21Q9NR30 783 aaKnown RBP eCLIP11.14□□□□□ -0.63
VWA3B-201ENST00000409460 ANP32CO43423 234 aa11.14□□□□□ -0.63
VWA3B-201ENST00000409460 BRPF3Q9ULD4 1205 aa11.14□□□□□ -0.63
VWA3B-201ENST00000409460 SCN11AQ9UI33 1791 aa11.14□□□□□ -0.63
VWA3B-201ENST00000409460 L3MBTL3Q96JM7 780 aaPredicted RBP11.14□□□□□ -0.63
VWA3B-201ENST00000409460 CDC5LQ99459 802 aaKnown RBP11.14□□□□□ -0.63
VWA3B-201ENST00000409460 ZNRF3Q9ULT6 936 aa11.14□□□□□ -0.63
VWA3B-201ENST00000409460 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
VWA3B-201ENST00000409460 CNTROBQ8N137 903 aa11.14□□□□□ -0.63
VWA3B-201ENST00000409460 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
VWA3B-201ENST00000409460 DCPSQ96C86 337 aaKnown RBP11.14□□□□□ -0.63
VWA3B-201ENST00000409460 ADARB2Q9NS39 739 aaKnown RBP11.14□□□□□ -0.63
VWA3B-201ENST00000409460 CA12O43570 354 aa11.13□□□□□ -0.63
VWA3B-201ENST00000409460 COPS6Q7L5N1 327 aa11.13□□□□□ -0.63
VWA3B-201ENST00000409460 ANKIB1Q9P2G1 1089 aa11.13□□□□□ -0.63
VWA3B-201ENST00000409460 RBM10P98175 930 aaKnown RBP11.13□□□□□ -0.63
VWA3B-201ENST00000409460 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
VWA3B-201ENST00000409460 SP8Q8IXZ3 490 aa11.12□□□□□ -0.63
VWA3B-201ENST00000409460 ZNF408Q9H9D4 720 aa11.12□□□□□ -0.63
VWA3B-201ENST00000409460 TCIRG1Q13488 830 aa11.12□□□□□ -0.63
VWA3B-201ENST00000409460 PLBD2Q8NHP8 589 aa11.12□□□□□ -0.63
VWA3B-201ENST00000409460 FGD1P98174 961 aa11.12□□□□□ -0.63
VWA3B-201ENST00000409460 JMYQ8N9B5 988 aa11.12□□□□□ -0.63
VWA3B-201ENST00000409460 CDHR2Q9BYE9 1310 aa11.12□□□□□ -0.63
VWA3B-201ENST00000409460 HOXA10P31260 410 aaPredicted RBP11.12□□□□□ -0.63
VWA3B-201ENST00000409460 TAF7LQ5H9L4 462 aa11.12□□□□□ -0.63
VWA3B-201ENST00000409460 C2orf69Q8N8R5 385 aa11.12□□□□□ -0.63
VWA3B-201ENST00000409460 ATP6V0A2Q9Y487 856 aa11.12□□□□□ -0.63
VWA3B-201ENST00000409460 PDIA4P13667 645 aaKnown RBP11.11□□□□□ -0.63
VWA3B-201ENST00000409460 GRAPQ13588 217 aa11.11□□□□□ -0.63
VWA3B-201ENST00000409460 TTLL7Q6ZT98 887 aa11.11□□□□□ -0.63
VWA3B-201ENST00000409460 GRAPLQ8TC17 118 aaPredicted RBP11.11□□□□□ -0.63
VWA3B-201ENST00000409460 FBXW7Q969H0 707 aa11.11□□□□□ -0.63
VWA3B-201ENST00000409460 MYH16Q9H6N6 1097 aa11.11□□□□□ -0.63
VWA3B-201ENST00000409460 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
VWA3B-201ENST00000409460 NSFL1CQ9UNZ2 370 aaKnown RBP11.11□□□□□ -0.63
VWA3B-201ENST00000409460 WDHD1O75717 1129 aaPredicted RBP11.11□□□□□ -0.63
VWA3B-201ENST00000409460 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
VWA3B-201ENST00000409460 THUMPD2Q9BTF0 503 aaKnown RBP11.11□□□□□ -0.63
VWA3B-201ENST00000409460 HDAC9Q9UKV0 1011 aa11.11□□□□□ -0.63
VWA3B-201ENST00000409460 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
VWA3B-201ENST00000409460 IGHMBP2P38935 993 aaKnown RBP11.1□□□□□ -0.63
VWA3B-201ENST00000409460 HLFQ16534 295 aa11.1□□□□□ -0.63
VWA3B-201ENST00000409460 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
VWA3B-201ENST00000409460 NBPF15Q8N660 670 aa11.1□□□□□ -0.63
VWA3B-201ENST00000409460 COL5A3P25940 1745 aaPredicted RBP11.1□□□□□ -0.63
VWA3B-201ENST00000409460 N4BP2Q86UW6 1770 aaPredicted RBP11.1□□□□□ -0.63
VWA3B-201ENST00000409460 WASHC4Q2M389 1173 aa11.1□□□□□ -0.63
VWA3B-201ENST00000409460 SUSD4Q5VX71 490 aa11.1□□□□□ -0.63
VWA3B-201ENST00000409460 IRX6P78412 446 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms