RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 DZIP3Q86Y13 1208 aaKnown RBP29.02■■■□□ 2.24
SPIRE1-202ENST00000409402 CYP7A1P22680 504 aa29.01■■■□□ 2.23
SPIRE1-202ENST00000409402 CACNA2D4Q7Z3S7 1137 aa29.01■■■□□ 2.23
SPIRE1-202ENST00000409402 VPS36Q86VN1 386 aa29.01■■■□□ 2.23
SPIRE1-202ENST00000409402 CCDC144CPQ8IYA2 1237 aa29.01■■■□□ 2.23
SPIRE1-202ENST00000409402 SPA17Q15506 151 aa29.01■■■□□ 2.23
SPIRE1-202ENST00000409402 NBPF14Q5TI25 921 aa29.01■■■□□ 2.23
SPIRE1-202ENST00000409402 MPNDQ8N594 471 aa29.01■■■□□ 2.23
SPIRE1-202ENST00000409402 ANKRD62A6NC57 917 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 TFCP2L1Q9NZI6 479 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 PARP3Q9Y6F1 533 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 NUP153P49790 1475 aaKnown RBP29■■■□□ 2.23
SPIRE1-202ENST00000409402 TPTE2Q6XPS3 522 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 ASXL1Q8IXJ9 1541 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 LMTK3Q96Q04 1460 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 AMPD3Q01432 767 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 MICU3Q86XE3 530 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 GRM8O00222 908 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 CNNM3Q8NE01 707 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 TRAPPC8Q9Y2L5 1435 aa29■■■□□ 2.23
SPIRE1-202ENST00000409402 UGGT2Q9NYU1 1516 aa28.99■■■□□ 2.23
SPIRE1-202ENST00000409402 TSPY3P0CV98 308 aa28.99■■■□□ 2.23
SPIRE1-202ENST00000409402 TSPY8P0CW00 308 aa28.99■■■□□ 2.23
SPIRE1-202ENST00000409402 KRT23Q9C075 422 aa28.99■■■□□ 2.23
SPIRE1-202ENST00000409402 IL15P40933 162 aaPredicted RBP28.98■■■□□ 2.23
SPIRE1-202ENST00000409402 LIG1P18858 919 aa28.98■■■□□ 2.23
SPIRE1-202ENST00000409402 TMEM87AQ8NBN3 555 aa28.98■■■□□ 2.23
SPIRE1-202ENST00000409402 CTAGE5O15320 804 aa28.98■■■□□ 2.23
SPIRE1-202ENST00000409402 TRAF1Q13077 416 aa28.98■■■□□ 2.23
SPIRE1-202ENST00000409402 BMP2KLQ5H9B9 411 aa28.98■■■□□ 2.23
SPIRE1-202ENST00000409402 LMBR1LQ6UX01 489 aa28.98■■■□□ 2.23
SPIRE1-202ENST00000409402 SYCE3A1L190 88 aa28.97■■■□□ 2.23
SPIRE1-202ENST00000409402 CCDC183Q5T5S1 534 aa28.97■■■□□ 2.23
SPIRE1-202ENST00000409402 TTC22Q5TAA0 569 aa28.97■■■□□ 2.23
SPIRE1-202ENST00000409402 STX8Q9UNK0 236 aa28.97■■■□□ 2.23
SPIRE1-202ENST00000409402 MCM5P33992 734 aa28.97■■■□□ 2.23
SPIRE1-202ENST00000409402 TRPM2O94759 1503 aa28.97■■■□□ 2.23
SPIRE1-202ENST00000409402 F8W031 263 aaPredicted RBP28.97■■■□□ 2.23
SPIRE1-202ENST00000409402 H0YHG0 523 aa28.97■■■□□ 2.23
SPIRE1-202ENST00000409402 STXBP4Q6ZWJ1 553 aa28.97■■■□□ 2.23
SPIRE1-202ENST00000409402 CWC15Q9P013 229 aaKnown RBP28.96■■■□□ 2.23
SPIRE1-202ENST00000409402 ORC3Q9UBD5 711 aaPredicted RBP28.96■■■□□ 2.23
SPIRE1-202ENST00000409402 SAMM50Q9Y512 469 aa28.96■■■□□ 2.23
SPIRE1-202ENST00000409402 PYM1Q9BRP8 204 aaKnown RBP28.96■■■□□ 2.23
SPIRE1-202ENST00000409402 SLC4A4Q9Y6R1 1079 aa28.96■■■□□ 2.23
SPIRE1-202ENST00000409402 ZMYM3Q14202 1370 aa28.96■■■□□ 2.23
SPIRE1-202ENST00000409402 CCDC191Q8NCU4 936 aa28.96■■■□□ 2.23
SPIRE1-202ENST00000409402 SLC26A6Q9BXS9 759 aa28.96■■■□□ 2.23
SPIRE1-202ENST00000409402 WTAPQ15007 396 aa28.96■■■□□ 2.23
SPIRE1-202ENST00000409402 NAA16Q6N069 864 aaPredicted RBP28.95■■■□□ 2.23
SPIRE1-202ENST00000409402 NFATC2IPQ8NCF5 419 aa28.95■■■□□ 2.23
SPIRE1-202ENST00000409402 DCAF5Q96JK2 942 aa28.95■■■□□ 2.23
SPIRE1-202ENST00000409402 CETN1Q12798 172 aa28.95■■■□□ 2.22
SPIRE1-202ENST00000409402 TBC1D9Q6ZT07 1266 aa28.95■■■□□ 2.22
SPIRE1-202ENST00000409402 CCDC148Q8NFR7 591 aa28.95■■■□□ 2.22
SPIRE1-202ENST00000409402 GCP02774 474 aa28.95■■■□□ 2.22
SPIRE1-202ENST00000409402 MTHFSDQ2M296 383 aaKnown RBP28.95■■■□□ 2.22
SPIRE1-202ENST00000409402 PCDH11XQ9BZA7 1347 aa28.95■■■□□ 2.22
SPIRE1-202ENST00000409402 PCDH11YQ9BZA8 1340 aa28.95■■■□□ 2.22
SPIRE1-202ENST00000409402 GJB2P29033 226 aa28.94■■■□□ 2.22
SPIRE1-202ENST00000409402 CNNM2Q9H8M5 875 aa28.94■■■□□ 2.22
SPIRE1-202ENST00000409402 NPATQ14207 1427 aa28.94■■■□□ 2.22
SPIRE1-202ENST00000409402 IQSEC3Q9UPP2 1182 aaPredicted RBP28.94■■■□□ 2.22
SPIRE1-202ENST00000409402 CLEC11AQ9Y240 323 aa28.94■■■□□ 2.22
SPIRE1-202ENST00000409402 TSHZ3Q63HK5 1081 aa28.94■■■□□ 2.22
SPIRE1-202ENST00000409402 ESR2Q92731 530 aa28.94■■■□□ 2.22
SPIRE1-202ENST00000409402 PUS7Q96PZ0 661 aaKnown RBP28.94■■■□□ 2.22
SPIRE1-202ENST00000409402 ABCC1P33527 1531 aa28.93■■■□□ 2.22
SPIRE1-202ENST00000409402 MEIS3Q99687 375 aa28.93■■■□□ 2.22
SPIRE1-202ENST00000409402 ENOX2Q16206 610 aaKnown RBP28.93■■■□□ 2.22
SPIRE1-202ENST00000409402 MAP7D2Q96T17 732 aa28.93■■■□□ 2.22
SPIRE1-202ENST00000409402 GBP2P32456 591 aaPredicted RBP28.92■■■□□ 2.22
SPIRE1-202ENST00000409402 FSIP1Q8NA03 581 aa28.92■■■□□ 2.22
SPIRE1-202ENST00000409402 POLKQ9UBT6 870 aa28.92■■■□□ 2.22
SPIRE1-202ENST00000409402 ZRANB1Q9UGI0 708 aa28.92■■■□□ 2.22
SPIRE1-202ENST00000409402 SFPQP23246 707 aaKnown RBP eCLIP28.92■■■□□ 2.22
SPIRE1-202ENST00000409402 TMTC2Q8N394 836 aa28.92■■■□□ 2.22
SPIRE1-202ENST00000409402 LARP6Q9BRS8 491 aaKnown RBP28.92■■■□□ 2.22
SPIRE1-202ENST00000409402 ZC3H12CQ9C0D7 883 aaKnown RBP28.92■■■□□ 2.22
SPIRE1-202ENST00000409402 LRRC27Q9C0I9 530 aa28.92■■■□□ 2.22
SPIRE1-202ENST00000409402 UBA7P41226 1012 aa28.91■■■□□ 2.22
SPIRE1-202ENST00000409402 CENPHQ9H3R5 247 aa28.91■■■□□ 2.22
SPIRE1-202ENST00000409402 MAP3K5Q99683 1374 aa28.91■■■□□ 2.22
SPIRE1-202ENST00000409402 IDEP14735 1019 aa28.91■■■□□ 2.22
SPIRE1-202ENST00000409402 KCNA6P17658 529 aa28.91■■■□□ 2.22
SPIRE1-202ENST00000409402 PICALMQ13492 652 aa28.91■■■□□ 2.22
SPIRE1-202ENST00000409402 IFIT1BQ5T764 474 aaKnown RBP28.9■■■□□ 2.22
SPIRE1-202ENST00000409402 TRMT1LQ7Z2T5 733 aaKnown RBP28.9■■■□□ 2.22
SPIRE1-202ENST00000409402 PRAG1Q86YV5 1406 aa28.9■■■□□ 2.22
SPIRE1-202ENST00000409402 EIF3JO75822 258 aaKnown RBP28.9■■■□□ 2.22
SPIRE1-202ENST00000409402 NF2P35240 595 aa28.9■■■□□ 2.22
SPIRE1-202ENST00000409402 JDP2Q8WYK2 163 aa28.89■■■□□ 2.22
SPIRE1-202ENST00000409402 SPDYE4A6NLX3 237 aa28.89■■■□□ 2.22
SPIRE1-202ENST00000409402 NBPF7P0C2Y1 421 aaPredicted RBP28.89■■■□□ 2.22
SPIRE1-202ENST00000409402 TOP1P11387 765 aaKnown RBP28.89■■■□□ 2.21
SPIRE1-202ENST00000409402 LEKR1Q6ZMV7 388 aa28.89■■■□□ 2.21
SPIRE1-202ENST00000409402 TAX1BP1Q86VP1 789 aa28.89■■■□□ 2.21
SPIRE1-202ENST00000409402 RAB11FIP4Q86YS3 637 aa28.89■■■□□ 2.21
SPIRE1-202ENST00000409402 CDCA7Q9BWT1 371 aaPredicted RBP28.89■■■□□ 2.21
SPIRE1-202ENST00000409402 TSPYL1Q9H0U9 437 aa28.89■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms