RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 IL17REQ8NFR9 667 aa14.23□□□□□ -0.13
PCDH20-201ENST00000409204 UPF3BQ9BZI7 483 aaKnown RBP14.23□□□□□ -0.13
PCDH20-201ENST00000409204 ECHDC1Q9NTX5 307 aa14.23□□□□□ -0.13
PCDH20-201ENST00000409204 ZNF521Q96K83 1311 aa14.23□□□□□ -0.13
PCDH20-201ENST00000409204 USP5P45974 858 aa14.23□□□□□ -0.13
PCDH20-201ENST00000409204 TEX35Q5T0J7 233 aa14.23□□□□□ -0.13
PCDH20-201ENST00000409204 SPATA32Q96LK8 384 aa14.23□□□□□ -0.13
PCDH20-201ENST00000409204 NAPBQ9H115 298 aa14.23□□□□□ -0.13
PCDH20-201ENST00000409204 ALKQ9UM73 1620 aa14.23□□□□□ -0.13
PCDH20-201ENST00000409204 TTC22Q5TAA0 569 aa14.22□□□□□ -0.13
PCDH20-201ENST00000409204 CASTP20810 708 aaKnown RBP14.22□□□□□ -0.13
PCDH20-201ENST00000409204 CAGE1Q8TC20 777 aa14.22□□□□□ -0.13
PCDH20-201ENST00000409204 AK7Q96M32 723 aa14.22□□□□□ -0.13
PCDH20-201ENST00000409204 DCTPP1Q9H773 170 aa14.22□□□□□ -0.13
PCDH20-201ENST00000409204 LUC7LQ9NQ29 371 aaKnown RBP14.22□□□□□ -0.13
PCDH20-201ENST00000409204 ANKIB1Q9P2G1 1089 aa14.22□□□□□ -0.13
PCDH20-201ENST00000409204 SERPINC1P01008 464 aa14.22□□□□□ -0.13
PCDH20-201ENST00000409204 HSP90B2PQ58FF3 399 aa14.22□□□□□ -0.13
PCDH20-201ENST00000409204 TRMT2AQ8IZ69 625 aaKnown RBP14.22□□□□□ -0.13
PCDH20-201ENST00000409204 BABAM1Q9NWV8 329 aa14.22□□□□□ -0.13
PCDH20-201ENST00000409204 GLI2P10070 1586 aa14.22□□□□□ -0.13
PCDH20-201ENST00000409204 CCDC196A0A1B0GTZ2 297 aa14.22□□□□□ -0.13
PCDH20-201ENST00000409204 POLR3DP05423 398 aaPredicted RBP14.22□□□□□ -0.13
PCDH20-201ENST00000409204 DZIP1Q86YF9 867 aaKnown RBP14.22□□□□□ -0.13
PCDH20-201ENST00000409204 DDX21Q9NR30 783 aaKnown RBP eCLIP14.22□□□□□ -0.13
PCDH20-201ENST00000409204 ABCA6Q8N139 1617 aa14.21□□□□□ -0.13
PCDH20-201ENST00000409204 MKNK2Q9HBH9 465 aa14.21□□□□□ -0.13
PCDH20-201ENST00000409204 PCDH11XQ9BZA7 1347 aa14.21□□□□□ -0.13
PCDH20-201ENST00000409204 PCDH11YQ9BZA8 1340 aa14.21□□□□□ -0.13
PCDH20-201ENST00000409204 MINDY4BA8MYZ0 360 aa14.21□□□□□ -0.13
PCDH20-201ENST00000409204 CRACR2BQ8N4Y2 399 aaPredicted RBP14.21□□□□□ -0.13
PCDH20-201ENST00000409204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.21□□□□□ -0.13
PCDH20-201ENST00000409204 RPGRQ92834 1020 aaKnown RBP14.21□□□□□ -0.14
PCDH20-201ENST00000409204 SSBP05455 408 aaKnown RBP eCLIP14.2□□□□□ -0.14
PCDH20-201ENST00000409204 ZNF76P36508 570 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 PDCL3Q9H2J4 239 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 SDSP20132 328 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 PDE1AP54750 535 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 SLF2Q8IX21 1173 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 MYO6Q9UM54 1294 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 PA2G4Q9UQ80 394 aaKnown RBP14.2□□□□□ -0.14
PCDH20-201ENST00000409204 SOS1Q07889 1333 aaPredicted RBP14.2□□□□□ -0.14
PCDH20-201ENST00000409204 TTLL5Q6EMB2 1281 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 LMBR1LQ6UX01 489 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 LDHAL6AQ6ZMR3 332 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 ARHGEF25Q86VW2 580 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 PPFIBP1Q86W92 1011 aa14.2□□□□□ -0.14
PCDH20-201ENST00000409204 CDC5LQ99459 802 aaKnown RBP14.2□□□□□ -0.14
PCDH20-201ENST00000409204 PRPF40BQ6NWY9 871 aaKnown RBP14.19□□□□□ -0.14
PCDH20-201ENST00000409204 HMGB1P09429 215 aaKnown RBP14.19□□□□□ -0.14
PCDH20-201ENST00000409204 C8orf34Q49A92 452 aa14.19□□□□□ -0.14
PCDH20-201ENST00000409204 CEP57L1Q8IYX8 460 aa14.19□□□□□ -0.14
PCDH20-201ENST00000409204 CEP131Q9UPN4 1083 aa14.19□□□□□ -0.14
PCDH20-201ENST00000409204 IQCA1Q86XH1 822 aa14.19□□□□□ -0.14
PCDH20-201ENST00000409204 RNF41Q9H4P4 317 aaPredicted RBP14.19□□□□□ -0.14
PCDH20-201ENST00000409204 USP19O94966 1318 aa14.19□□□□□ -0.14
PCDH20-201ENST00000409204 KCNQ3O43525 872 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 ATP6V1AP38606 617 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 SETQ01105 290 aaPredicted RBP14.18□□□□□ -0.14
PCDH20-201ENST00000409204 CTCFLQ8NI51 663 aaPredicted RBP14.18□□□□□ -0.14
PCDH20-201ENST00000409204 SLC52A2Q9HAB3 445 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 CAMSAP1Q5T5Y3 1602 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 DDX11Q96FC9 970 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 TBC1D2Q9BYX2 928 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 EIF4A1P60842 406 aaKnown RBP14.18□□□□□ -0.14
PCDH20-201ENST00000409204 ERCC4Q92889 916 aaPredicted RBP14.18□□□□□ -0.14
PCDH20-201ENST00000409204 NUP62CLQ9H1M0 184 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 SH2B1Q9NRF2 756 aaPredicted RBP14.18□□□□□ -0.14
PCDH20-201ENST00000409204 MPHOSPH10O00566 681 aaKnown RBP14.18□□□□□ -0.14
PCDH20-201ENST00000409204 HOXB7P09629 217 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 TXLNBQ8N3L3 684 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 TBC1D32Q96NH3 1257 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 IGSF1Q8N6C5 1336 aa14.18□□□□□ -0.14
PCDH20-201ENST00000409204 LDHCP07864 332 aa14.17□□□□□ -0.14
PCDH20-201ENST00000409204 KRI1Q8N9T8 703 aaKnown RBP14.17□□□□□ -0.14
PCDH20-201ENST00000409204 ZNF496Q96IT1 587 aaPredicted RBP14.17□□□□□ -0.14
PCDH20-201ENST00000409204 SEC63Q9UGP8 760 aaKnown RBP14.17□□□□□ -0.14
PCDH20-201ENST00000409204 CBFA2T2O43439 604 aa14.17□□□□□ -0.14
PCDH20-201ENST00000409204 TANGO6Q9C0B7 1094 aa14.17□□□□□ -0.14
PCDH20-201ENST00000409204 ZNF444Q8N0Y2 327 aaPredicted RBP14.17□□□□□ -0.14
PCDH20-201ENST00000409204 SNRKQ9NRH2 765 aa14.17□□□□□ -0.14
PCDH20-201ENST00000409204 PIBF1Q8WXW3 757 aa14.16□□□□□ -0.14
PCDH20-201ENST00000409204 ZNF213O14771 459 aa14.16□□□□□ -0.14
PCDH20-201ENST00000409204 EVI5LQ96CN4 794 aa14.16□□□□□ -0.14
PCDH20-201ENST00000409204 KDM2BQ8NHM5 1336 aa14.16□□□□□ -0.14
PCDH20-201ENST00000409204 C6orf229H3BNL8 230 aa14.16□□□□□ -0.14
PCDH20-201ENST00000409204 DEF6Q9H4E7 631 aa14.16□□□□□ -0.14
PCDH20-201ENST00000409204 KIAA0232Q92628 1395 aa14.16□□□□□ -0.14
PCDH20-201ENST00000409204 DDX46Q7L014 1031 aaKnown RBP14.15□□□□□ -0.14
PCDH20-201ENST00000409204 MCM4P33991 863 aa14.15□□□□□ -0.14
PCDH20-201ENST00000409204 CCDC83Q8IWF9 413 aa14.15□□□□□ -0.14
PCDH20-201ENST00000409204 WDHD1O75717 1129 aaPredicted RBP14.15□□□□□ -0.14
PCDH20-201ENST00000409204 HMGN5P82970 282 aaKnown RBP14.15□□□□□ -0.14
PCDH20-201ENST00000409204 TTF1Q15361 905 aaPredicted RBP14.15□□□□□ -0.14
PCDH20-201ENST00000409204 PAF1Q8N7H5 531 aa14.15□□□□□ -0.14
PCDH20-201ENST00000409204 GOLIM4O00461 696 aa14.15□□□□□ -0.14
PCDH20-201ENST00000409204 RANBP6O60518 1105 aaKnown RBP14.14□□□□□ -0.15
PCDH20-201ENST00000409204 ZNF335Q9H4Z2 1342 aaPredicted RBP14.14□□□□□ -0.15
PCDH20-201ENST00000409204 FERMT3Q86UX7 667 aa14.14□□□□□ -0.15
PCDH20-201ENST00000409204 PLEKHM2Q8IWE5 1019 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms