RNA–Protein interactions for RNA: ENST00000409091.5

COPS7B-204, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 5 BASIC

Gene COPS7B, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-204ENST00000409091 FAM9BQ8IZU0 186 aa17.43■□□□□ 0.38
COPS7B-204ENST00000409091 KDM2BQ8NHM5 1336 aa17.43■□□□□ 0.38
COPS7B-204ENST00000409091 LTBP3Q9NS15 1303 aa17.43■□□□□ 0.38
COPS7B-204ENST00000409091 ABCC12Q96J65 1359 aa17.42■□□□□ 0.38
COPS7B-204ENST00000409091 C21orf2O43822 256 aa17.42■□□□□ 0.38
COPS7B-204ENST00000409091 DDX58O95786 925 aaKnown RBP17.42■□□□□ 0.38
COPS7B-204ENST00000409091 ERFEQ4G0M1 354 aa17.42■□□□□ 0.38
COPS7B-204ENST00000409091 NUTM1Q86Y26 1132 aa17.42■□□□□ 0.38
COPS7B-204ENST00000409091 ZNF526Q8TF50 670 aaPredicted RBP17.42■□□□□ 0.38
COPS7B-204ENST00000409091 STK31Q9BXU1 1019 aa17.42■□□□□ 0.38
COPS7B-204ENST00000409091 GRIPAP1Q4V328 841 aa17.41■□□□□ 0.38
COPS7B-204ENST00000409091 CCDC93Q567U6 631 aa17.41■□□□□ 0.38
COPS7B-204ENST00000409091 NLRP3Q96P20 1036 aa17.41■□□□□ 0.38
COPS7B-204ENST00000409091 TAOK3Q9H2K8 898 aa17.41■□□□□ 0.38
COPS7B-204ENST00000409091 ELL2O00472 640 aaPredicted RBP17.4■□□□□ 0.38
COPS7B-204ENST00000409091 HSP90B1P14625 803 aaKnown RBP17.4■□□□□ 0.38
COPS7B-204ENST00000409091 C1QTNF8P60827 252 aa17.4■□□□□ 0.38
COPS7B-204ENST00000409091 RASSF7Q02833 373 aa17.4■□□□□ 0.38
COPS7B-204ENST00000409091 NLRP10Q86W26 655 aa17.4■□□□□ 0.38
COPS7B-204ENST00000409091 RTKN2Q8IZC4 609 aa17.4■□□□□ 0.38
COPS7B-204ENST00000409091 C8orf58Q8NAV2 365 aa17.4■□□□□ 0.38
COPS7B-204ENST00000409091 RBM17Q96I25 401 aaKnown RBP17.4■□□□□ 0.38
COPS7B-204ENST00000409091 SH3TC1Q8TE82 1336 aa17.4■□□□□ 0.38
COPS7B-204ENST00000409091 HOXA10P31260 410 aaPredicted RBP17.39■□□□□ 0.37
COPS7B-204ENST00000409091 CC2D2BQ6DHV5 1058 aa17.39■□□□□ 0.37
COPS7B-204ENST00000409091 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
COPS7B-204ENST00000409091 TSR2Q969E8 191 aaKnown RBP17.39■□□□□ 0.37
COPS7B-204ENST00000409091 TMX4Q9H1E5 349 aaPredicted RBP17.39■□□□□ 0.37
COPS7B-204ENST00000409091 MYH16Q9H6N6 1097 aa17.39■□□□□ 0.37
COPS7B-204ENST00000409091 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
COPS7B-204ENST00000409091 TRMT112Q9UI30 125 aaKnown RBP17.39■□□□□ 0.37
COPS7B-204ENST00000409091 LAMB2P55268 1798 aa17.38■□□□□ 0.37
COPS7B-204ENST00000409091 NFKBIEO00221 500 aa17.38■□□□□ 0.37
COPS7B-204ENST00000409091 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
COPS7B-204ENST00000409091 SLC10A5Q5PT55 438 aa17.38■□□□□ 0.37
COPS7B-204ENST00000409091 CRAMP1Q96RY5 1269 aa17.37■□□□□ 0.37
COPS7B-204ENST00000409091 FANCIQ9NVI1 1328 aa17.37■□□□□ 0.37
COPS7B-204ENST00000409091 TRIM28Q13263 835 aaKnown RBP17.36■□□□□ 0.37
COPS7B-204ENST00000409091 FKBP4Q02790 459 aaKnown RBP eCLIP17.35■□□□□ 0.37
COPS7B-204ENST00000409091 DPY19L2Q6NUT2 758 aa17.35■□□□□ 0.37
COPS7B-204ENST00000409091 C16orf71Q8IYS4 520 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-204ENST00000409091 C7orf43Q8WVR3 580 aa17.35■□□□□ 0.37
COPS7B-204ENST00000409091 ISCA1Q9BUE6 129 aa17.35■□□□□ 0.37
COPS7B-204ENST00000409091 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-204ENST00000409091 CCER2I3L3R5 266 aa17.34■□□□□ 0.37
COPS7B-204ENST00000409091 DDX60Q8IY21 1712 aaKnown RBP17.34■□□□□ 0.37
COPS7B-204ENST00000409091 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
COPS7B-204ENST00000409091 SENP3-EIF4A1A0A087X0R7 540 aa17.33■□□□□ 0.36
COPS7B-204ENST00000409091 GLTPD2A6NH11 291 aa17.33■□□□□ 0.36
COPS7B-204ENST00000409091 PPEF1O14829 653 aaPredicted RBP17.33■□□□□ 0.36
COPS7B-204ENST00000409091 NEXNQ0ZGT2 675 aa17.33■□□□□ 0.36
COPS7B-204ENST00000409091 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
COPS7B-204ENST00000409091 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
COPS7B-204ENST00000409091 PHAXQ9H814 394 aaKnown RBP17.33■□□□□ 0.36
COPS7B-204ENST00000409091 ATP5J2-PTCD1G3V325 749 aa17.32■□□□□ 0.36
COPS7B-204ENST00000409091 CCDC191Q8NCU4 936 aa17.32■□□□□ 0.36
COPS7B-204ENST00000409091 PSMD1Q99460 953 aa17.32■□□□□ 0.36
COPS7B-204ENST00000409091 KIF3CO14782 793 aa17.31■□□□□ 0.36
COPS7B-204ENST00000409091 BBOX1O75936 387 aa17.31■□□□□ 0.36
COPS7B-204ENST00000409091 TOMM70O94826 608 aa17.31■□□□□ 0.36
COPS7B-204ENST00000409091 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
COPS7B-204ENST00000409091 KSR2Q6VAB6 950 aa17.31■□□□□ 0.36
COPS7B-204ENST00000409091 ZBTB38Q8NAP3 1195 aaPredicted RBP17.31■□□□□ 0.36
COPS7B-204ENST00000409091 MYD88Q99836 296 aa17.31■□□□□ 0.36
COPS7B-204ENST00000409091 METTL22Q9BUU2 404 aaPredicted RBP17.31■□□□□ 0.36
COPS7B-204ENST00000409091 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
COPS7B-204ENST00000409091 NMRK2Q9NPI5 230 aa17.3■□□□□ 0.36
COPS7B-204ENST00000409091 CWC25Q9NXE8 425 aaPredicted RBP17.3■□□□□ 0.36
COPS7B-204ENST00000409091 WDR90Q96KV7 1748 aa17.3■□□□□ 0.36
COPS7B-204ENST00000409091 ABCC4O15439 1325 aa17.29■□□□□ 0.36
COPS7B-204ENST00000409091 SUPT20HQ8NEM7 779 aa17.29■□□□□ 0.36
COPS7B-204ENST00000409091 FAM89AQ96GI7 184 aa17.29■□□□□ 0.36
COPS7B-204ENST00000409091 MAP3K2Q9Y2U5 619 aa17.29■□□□□ 0.36
COPS7B-204ENST00000409091 ATP6V0A2Q9Y487 856 aa17.29■□□□□ 0.36
COPS7B-204ENST00000409091 MYH3P11055 1940 aa17.29■□□□□ 0.36
COPS7B-204ENST00000409091 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
COPS7B-204ENST00000409091 IRS4O14654 1257 aaPredicted RBP17.28■□□□□ 0.36
COPS7B-204ENST00000409091 PCCAP05165 728 aaPredicted RBP17.28■□□□□ 0.36
COPS7B-204ENST00000409091 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
COPS7B-204ENST00000409091 IARSP41252 1262 aaKnown RBP17.28■□□□□ 0.36
COPS7B-204ENST00000409091 PRELPP51888 382 aa17.28■□□□□ 0.36
COPS7B-204ENST00000409091 EXOSC9Q06265 439 aaKnown RBP17.28■□□□□ 0.36
COPS7B-204ENST00000409091 GRAPQ13588 217 aa17.28■□□□□ 0.36
COPS7B-204ENST00000409091 C3orf67Q6ZVT6 689 aa17.28■□□□□ 0.36
COPS7B-204ENST00000409091 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
COPS7B-204ENST00000409091 RBM46Q8TBY0 533 aaKnown RBP17.28■□□□□ 0.36
COPS7B-204ENST00000409091 GRAPLQ8TC17 118 aaPredicted RBP17.28■□□□□ 0.36
COPS7B-204ENST00000409091 JDP2Q8WYK2 163 aa17.28■□□□□ 0.36
COPS7B-204ENST00000409091 VPS33BQ9H267 617 aa17.28■□□□□ 0.36
COPS7B-204ENST00000409091 VAMP4O75379 141 aa17.27■□□□□ 0.36
COPS7B-204ENST00000409091 FLIIQ13045 1269 aa17.27■□□□□ 0.36
COPS7B-204ENST00000409091 SF3B3Q15393 1217 aaKnown RBP17.27■□□□□ 0.36
COPS7B-204ENST00000409091 SYNE4Q8N205 404 aa17.27■□□□□ 0.36
COPS7B-204ENST00000409091 ZNF277Q9NRM2 450 aaPredicted RBP17.27■□□□□ 0.36
COPS7B-204ENST00000409091 SNED1Q8TER0 1413 aa17.27■□□□□ 0.35
COPS7B-204ENST00000409091 SCN4AP35499 1836 aa17.26■□□□□ 0.35
COPS7B-204ENST00000409091 ZNF521Q96K83 1311 aa17.26■□□□□ 0.35
COPS7B-204ENST00000409091 E9PSI1 815 aa17.26■□□□□ 0.35
COPS7B-204ENST00000409091 FKBP5Q13451 457 aaPredicted RBP17.26■□□□□ 0.35
COPS7B-204ENST00000409091 SP8Q8IXZ3 490 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms