RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 TTLL7Q6ZT98 887 aa17.48■□□□□ 0.39
TUBA3D-202ENST00000409047 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
TUBA3D-202ENST00000409047 TRPM7Q96QT4 1865 aa17.48■□□□□ 0.39
TUBA3D-202ENST00000409047 ERVV-1B6SEH8 477 aa17.47■□□□□ 0.39
TUBA3D-202ENST00000409047 HOXA10P31260 410 aaPredicted RBP17.47■□□□□ 0.39
TUBA3D-202ENST00000409047 DEFB115Q30KQ5 88 aa17.47■□□□□ 0.39
TUBA3D-202ENST00000409047 NUDCQ9Y266 331 aa17.47■□□□□ 0.39
TUBA3D-202ENST00000409047 MAP3K15Q6ZN16 1313 aa17.47■□□□□ 0.39
TUBA3D-202ENST00000409047 WDR33Q9C0J8 1336 aaKnown RBP17.47■□□□□ 0.39
TUBA3D-202ENST00000409047 IBTKQ9P2D0 1353 aaPredicted RBP17.46■□□□□ 0.39
TUBA3D-202ENST00000409047 C3orf67Q6ZVT6 689 aa17.46■□□□□ 0.39
TUBA3D-202ENST00000409047 AIDAQ96BJ3 306 aa17.46■□□□□ 0.39
TUBA3D-202ENST00000409047 DDX21Q9NR30 783 aaKnown RBP eCLIP17.46■□□□□ 0.39
TUBA3D-202ENST00000409047 EPS15P42566 896 aa17.45■□□□□ 0.38
TUBA3D-202ENST00000409047 SUSD4Q5VX71 490 aa17.45■□□□□ 0.38
TUBA3D-202ENST00000409047 EIF4A1P60842 406 aaKnown RBP17.44■□□□□ 0.38
TUBA3D-202ENST00000409047 CC2D2BQ6DHV5 1058 aa17.44■□□□□ 0.38
TUBA3D-202ENST00000409047 NGEFQ8N5V2 710 aa17.44■□□□□ 0.38
TUBA3D-202ENST00000409047 NYXQ9GZU5 481 aa17.44■□□□□ 0.38
TUBA3D-202ENST00000409047 NTSR2O95665 410 aa17.43■□□□□ 0.38
TUBA3D-202ENST00000409047 GTF2E1P29083 439 aaPredicted RBP17.43■□□□□ 0.38
TUBA3D-202ENST00000409047 CST9Q5W186 159 aa17.43■□□□□ 0.38
TUBA3D-202ENST00000409047 LRP10Q7Z4F1 713 aa17.43■□□□□ 0.38
TUBA3D-202ENST00000409047 ZNF34Q8IZ26 560 aa17.43■□□□□ 0.38
TUBA3D-202ENST00000409047 JDP2Q8WYK2 163 aa17.43■□□□□ 0.38
TUBA3D-202ENST00000409047 GJA3Q9Y6H8 435 aa17.43■□□□□ 0.38
TUBA3D-202ENST00000409047 GPTP24298 496 aa17.42■□□□□ 0.38
TUBA3D-202ENST00000409047 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
TUBA3D-202ENST00000409047 PLEKHF1Q96S99 279 aa17.42■□□□□ 0.38
TUBA3D-202ENST00000409047 LAMB2P55268 1798 aa17.41■□□□□ 0.38
TUBA3D-202ENST00000409047 TRAF5O00463 557 aa17.41■□□□□ 0.38
TUBA3D-202ENST00000409047 EIF6P56537 245 aaKnown RBP17.41■□□□□ 0.38
TUBA3D-202ENST00000409047 ABHD8Q96I13 439 aa17.41■□□□□ 0.38
TUBA3D-202ENST00000409047 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
TUBA3D-202ENST00000409047 ZBTB3Q9H5J0 574 aa17.41■□□□□ 0.38
TUBA3D-202ENST00000409047 ABT1Q9ULW3 272 aaKnown RBP17.41■□□□□ 0.38
TUBA3D-202ENST00000409047 RRP7AQ9Y3A4 280 aaKnown RBP17.41■□□□□ 0.38
TUBA3D-202ENST00000409047 MAP2K1Q02750 393 aaPredicted RBP17.4■□□□□ 0.38
TUBA3D-202ENST00000409047 LARGE2Q8N3Y3 721 aa17.4■□□□□ 0.38
TUBA3D-202ENST00000409047 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
TUBA3D-202ENST00000409047 PPEF1O14829 653 aaPredicted RBP17.39■□□□□ 0.37
TUBA3D-202ENST00000409047 MYL6BP14649 208 aa17.39■□□□□ 0.37
TUBA3D-202ENST00000409047 GRIPAP1Q4V328 841 aa17.39■□□□□ 0.37
TUBA3D-202ENST00000409047 CYP4F22Q6NT55 531 aa17.39■□□□□ 0.37
TUBA3D-202ENST00000409047 GIGYF2Q6Y7W6 1299 aaKnown RBP17.39■□□□□ 0.37
TUBA3D-202ENST00000409047 USP50Q70EL3 339 aaPredicted RBP17.39■□□□□ 0.37
TUBA3D-202ENST00000409047 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.37
TUBA3D-202ENST00000409047 CAPNS2Q96L46 248 aa17.39■□□□□ 0.37
TUBA3D-202ENST00000409047 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
TUBA3D-202ENST00000409047 PDIA6Q15084 440 aa17.38■□□□□ 0.37
TUBA3D-202ENST00000409047 KIF6Q6ZMV9 814 aa17.38■□□□□ 0.37
TUBA3D-202ENST00000409047 TLL2Q9Y6L7 1015 aa17.38■□□□□ 0.37
TUBA3D-202ENST00000409047 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
TUBA3D-202ENST00000409047 TAF1P21675 1872 aa17.37■□□□□ 0.37
TUBA3D-202ENST00000409047 TCERG1O14776 1098 aaKnown RBP17.37■□□□□ 0.37
TUBA3D-202ENST00000409047 AOC3Q16853 763 aa17.37■□□□□ 0.37
TUBA3D-202ENST00000409047 RBM17Q96I25 401 aaKnown RBP17.37■□□□□ 0.37
TUBA3D-202ENST00000409047 GPRC5DQ9NZD1 345 aa17.37■□□□□ 0.37
TUBA3D-202ENST00000409047 CXCL9Q07325 125 aa17.36■□□□□ 0.37
TUBA3D-202ENST00000409047 SLC10A5Q5PT55 438 aa17.36■□□□□ 0.37
TUBA3D-202ENST00000409047 NIM1KQ8IY84 436 aa17.36■□□□□ 0.37
TUBA3D-202ENST00000409047 GPR101Q96P66 508 aaPredicted RBP17.36■□□□□ 0.37
TUBA3D-202ENST00000409047 RTFDC1Q9BY42 306 aaPredicted RBP17.36■□□□□ 0.37
TUBA3D-202ENST00000409047 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
TUBA3D-202ENST00000409047 PPIP5K2O43314 1243 aa17.35■□□□□ 0.37
TUBA3D-202ENST00000409047 AOC2O75106 756 aa17.35■□□□□ 0.37
TUBA3D-202ENST00000409047 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
TUBA3D-202ENST00000409047 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
TUBA3D-202ENST00000409047 PGAP2Q9UHJ9 254 aa17.35■□□□□ 0.37
TUBA3D-202ENST00000409047 ABCC4O15439 1325 aa17.35■□□□□ 0.37
TUBA3D-202ENST00000409047 ERBB4Q15303 1308 aa17.35■□□□□ 0.37
TUBA3D-202ENST00000409047 DUOX1Q9NRD9 1551 aa17.35■□□□□ 0.37
TUBA3D-202ENST00000409047 ECE1P42892 770 aa17.34■□□□□ 0.37
TUBA3D-202ENST00000409047 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
TUBA3D-202ENST00000409047 VPS33BQ9H267 617 aa17.34■□□□□ 0.37
TUBA3D-202ENST00000409047 ADARB2Q9NS39 739 aaKnown RBP17.34■□□□□ 0.37
TUBA3D-202ENST00000409047 CASP8AP2Q9UKL3 1982 aa17.33■□□□□ 0.37
TUBA3D-202ENST00000409047 HIRAP54198 1017 aaPredicted RBP17.33■□□□□ 0.36
TUBA3D-202ENST00000409047 PARP10Q53GL7 1025 aa17.33■□□□□ 0.36
TUBA3D-202ENST00000409047 SAPCD2Q86UD0 394 aa17.33■□□□□ 0.36
TUBA3D-202ENST00000409047 NLRP3Q96P20 1036 aa17.33■□□□□ 0.36
TUBA3D-202ENST00000409047 TSKSQ9UJT2 592 aa17.33■□□□□ 0.36
TUBA3D-202ENST00000409047 ZNRF3Q9ULT6 936 aa17.33■□□□□ 0.36
TUBA3D-202ENST00000409047 TNRC18O15417 2968 aaPredicted RBP17.32■□□□□ 0.36
TUBA3D-202ENST00000409047 SLC34A2O95436 690 aa17.32■□□□□ 0.36
TUBA3D-202ENST00000409047 ANXA1P04083 346 aa17.32■□□□□ 0.36
TUBA3D-202ENST00000409047 RGS19P49795 217 aa17.32■□□□□ 0.36
TUBA3D-202ENST00000409047 GMPSP49915 693 aaPredicted RBP17.32■□□□□ 0.36
TUBA3D-202ENST00000409047 PPP1R42Q7Z4L9 355 aa17.32■□□□□ 0.36
TUBA3D-202ENST00000409047 GLIS2Q9BZE0 524 aaPredicted RBP17.32■□□□□ 0.36
TUBA3D-202ENST00000409047 LRRC37AA6NMS7 1700 aa17.32■□□□□ 0.36
TUBA3D-202ENST00000409047 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
TUBA3D-202ENST00000409047 MAP2K2P36507 400 aa17.31■□□□□ 0.36
TUBA3D-202ENST00000409047 GRM1Q13255 1194 aa17.31■□□□□ 0.36
TUBA3D-202ENST00000409047 PAXIP1Q6ZW49 1069 aaPredicted RBP17.31■□□□□ 0.36
TUBA3D-202ENST00000409047 UTP14AQ9BVJ6 771 aaKnown RBP17.31■□□□□ 0.36
TUBA3D-202ENST00000409047 COL4A1P02462 1669 aa17.31■□□□□ 0.36
TUBA3D-202ENST00000409047 YDJCA8MPS7 323 aa17.3■□□□□ 0.36
TUBA3D-202ENST00000409047 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
TUBA3D-202ENST00000409047 KIAA2012Q0VF49 1180 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms