RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 CCDC83Q8IWF9 413 aa19.91■□□□□ 0.78
COL23A1-202ENST00000407622 STX6O43752 255 aa19.9■□□□□ 0.78
COL23A1-202ENST00000407622 DDX58O95786 925 aaKnown RBP19.9■□□□□ 0.78
COL23A1-202ENST00000407622 G3BP1Q13283 466 aaKnown RBP eCLIP19.9■□□□□ 0.78
COL23A1-202ENST00000407622 NMIQ13287 307 aaPredicted RBP19.9■□□□□ 0.78
COL23A1-202ENST00000407622 JARID2Q92833 1246 aaPredicted RBP19.9■□□□□ 0.78
COL23A1-202ENST00000407622 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.9■□□□□ 0.78
COL23A1-202ENST00000407622 CCDC171Q6TFL3 1326 aa19.9■□□□□ 0.78
COL23A1-202ENST00000407622 NECTIN1Q15223 517 aa19.9■□□□□ 0.78
COL23A1-202ENST00000407622 NFATC2IPQ8NCF5 419 aa19.9■□□□□ 0.78
COL23A1-202ENST00000407622 XAGE3Q8WTP9 111 aa19.9■□□□□ 0.78
COL23A1-202ENST00000407622 SLC52A2Q9HAB3 445 aa19.9■□□□□ 0.78
COL23A1-202ENST00000407622 PDRG1Q9NUG6 133 aa19.9■□□□□ 0.78
COL23A1-202ENST00000407622 SCN11AQ9UI33 1791 aa19.89■□□□□ 0.78
COL23A1-202ENST00000407622 KCNB2Q92953 911 aa19.89■□□□□ 0.77
COL23A1-202ENST00000407622 BOLA2Q9H3K6 86 aa19.89■□□□□ 0.77
COL23A1-202ENST00000407622 ZSWIM6Q9HCJ5 1215 aa19.89■□□□□ 0.77
COL23A1-202ENST00000407622 NLRP2Q9NX02 1062 aa19.89■□□□□ 0.77
COL23A1-202ENST00000407622 SMC3Q9UQE7 1217 aa19.89■□□□□ 0.77
COL23A1-202ENST00000407622 RBM8AQ9Y5S9 174 aaKnown RBP19.89■□□□□ 0.77
COL23A1-202ENST00000407622 NEURL1BA8MQ27 555 aa19.88■□□□□ 0.77
COL23A1-202ENST00000407622 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.88■□□□□ 0.77
COL23A1-202ENST00000407622 A0A0D9SFI3 127 aa19.88■□□□□ 0.77
COL23A1-202ENST00000407622 COPS6Q7L5N1 327 aa19.88■□□□□ 0.77
COL23A1-202ENST00000407622 TSPY26PQ9H489 355 aa19.88■□□□□ 0.77
COL23A1-202ENST00000407622 MEGF6O75095 1541 aa19.88■□□□□ 0.77
COL23A1-202ENST00000407622 LTBP4Q8N2S1 1624 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 F13A1P00488 732 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 VPS53Q5VIR6 699 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 TMEM87AQ8NBN3 555 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 RAPGEF4Q8WZA2 1011 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 ZNF496Q96IT1 587 aaPredicted RBP19.87■□□□□ 0.77
COL23A1-202ENST00000407622 MYD88Q99836 296 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 PHKG2P15735 406 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 MSNP26038 577 aaKnown RBP19.87■□□□□ 0.77
COL23A1-202ENST00000407622 GJB2P29033 226 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 CREB3L3Q68CJ9 461 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 HDAC5Q9UQL6 1122 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 TAF6LQ9Y6J9 622 aa19.87■□□□□ 0.77
COL23A1-202ENST00000407622 GCKRQ14397 625 aa19.86■□□□□ 0.77
COL23A1-202ENST00000407622 ME3Q16798 604 aa19.86■□□□□ 0.77
COL23A1-202ENST00000407622 NECAB1Q8N987 351 aa19.86■□□□□ 0.77
COL23A1-202ENST00000407622 EDC3Q96F86 508 aaKnown RBP19.86■□□□□ 0.77
COL23A1-202ENST00000407622 CYP46A1Q9Y6A2 500 aa19.86■□□□□ 0.77
COL23A1-202ENST00000407622 LARP1Q6PKG0 1096 aaKnown RBP19.86■□□□□ 0.77
COL23A1-202ENST00000407622 SYAP1Q96A49 352 aaPredicted RBP19.86■□□□□ 0.77
COL23A1-202ENST00000407622 NOL7Q9UMY1 257 aaKnown RBP19.86■□□□□ 0.77
COL23A1-202ENST00000407622 USP16Q9Y5T5 823 aa19.86■□□□□ 0.77
COL23A1-202ENST00000407622 FIBPO43427 364 aa19.85■□□□□ 0.77
COL23A1-202ENST00000407622 HS1BP3Q53T59 392 aa19.85■□□□□ 0.77
COL23A1-202ENST00000407622 MAP4K1Q92918 833 aa19.85■□□□□ 0.77
COL23A1-202ENST00000407622 TM6SF1Q9BZW5 370 aa19.85■□□□□ 0.77
COL23A1-202ENST00000407622 LRP10Q7Z4F1 713 aa19.85■□□□□ 0.77
COL23A1-202ENST00000407622 TCEANC2Q96MN5 208 aa19.85■□□□□ 0.77
COL23A1-202ENST00000407622 MTMR6Q9Y217 621 aa19.85■□□□□ 0.77
COL23A1-202ENST00000407622 SLC27A2O14975 620 aa19.84■□□□□ 0.77
COL23A1-202ENST00000407622 FSD1Q9BTV5 496 aa19.84■□□□□ 0.77
COL23A1-202ENST00000407622 METTL22Q9BUU2 404 aaPredicted RBP19.84■□□□□ 0.77
COL23A1-202ENST00000407622 TPCN1Q9ULQ1 816 aa19.84■□□□□ 0.77
COL23A1-202ENST00000407622 KCNJ4P48050 445 aa19.84■□□□□ 0.77
COL23A1-202ENST00000407622 ZNF589Q86UQ0 364 aaPredicted RBP19.84■□□□□ 0.77
COL23A1-202ENST00000407622 NEXNQ0ZGT2 675 aa19.83■□□□□ 0.76
COL23A1-202ENST00000407622 ZKSCAN1P17029 563 aaPredicted RBP19.82■□□□□ 0.76
COL23A1-202ENST00000407622 TATP17735 454 aaPredicted RBP19.82■□□□□ 0.76
COL23A1-202ENST00000407622 DNM1Q05193 864 aaKnown RBP19.82■□□□□ 0.76
COL23A1-202ENST00000407622 NDUFB9Q9Y6M9 179 aa19.82■□□□□ 0.76
COL23A1-202ENST00000407622 CPDO75976 1380 aa19.82■□□□□ 0.76
COL23A1-202ENST00000407622 MRC1P22897 1456 aa19.82■□□□□ 0.76
COL23A1-202ENST00000407622 CHRNA2Q15822 529 aa19.82■□□□□ 0.76
COL23A1-202ENST00000407622 SNRKQ9NRH2 765 aa19.82■□□□□ 0.76
COL23A1-202ENST00000407622 CYP27B1O15528 508 aa19.81■□□□□ 0.76
COL23A1-202ENST00000407622 CHGBP05060 677 aa19.81■□□□□ 0.76
COL23A1-202ENST00000407622 SH2B1Q9NRF2 756 aaPredicted RBP19.81■□□□□ 0.76
COL23A1-202ENST00000407622 MED23Q9ULK4 1368 aa19.81■□□□□ 0.76
COL23A1-202ENST00000407622 NHSL1Q5SYE7 1610 aa19.81■□□□□ 0.76
COL23A1-202ENST00000407622 CCDC183Q5T5S1 534 aa19.81■□□□□ 0.76
COL23A1-202ENST00000407622 ANKRD13DQ6ZTN6 518 aa19.81■□□□□ 0.76
COL23A1-202ENST00000407622 ZSCAN31Q96LW9 406 aaPredicted RBP19.81■□□□□ 0.76
COL23A1-202ENST00000407622 HIP1O00291 1037 aa19.8■□□□□ 0.76
COL23A1-202ENST00000407622 OFD1O75665 1012 aa19.8■□□□□ 0.76
COL23A1-202ENST00000407622 RFX5P48382 616 aaPredicted RBP19.8■□□□□ 0.76
COL23A1-202ENST00000407622 UBE2HP62256 183 aa19.8■□□□□ 0.76
COL23A1-202ENST00000407622 DBNLQ9UJU6 430 aaKnown RBP19.8■□□□□ 0.76
COL23A1-202ENST00000407622 ZKSCAN5Q9Y2L8 839 aa19.8■□□□□ 0.76
COL23A1-202ENST00000407622 COL18A1P39060 1754 aa19.8■□□□□ 0.76
COL23A1-202ENST00000407622 VPS37CA5D8V6 355 aaPredicted RBP19.8■□□□□ 0.76
COL23A1-202ENST00000407622 PHF14O94880 888 aa19.8■□□□□ 0.76
COL23A1-202ENST00000407622 COL15A1P39059 1388 aa19.8■□□□□ 0.76
COL23A1-202ENST00000407622 AFDNP55196 1824 aaKnown RBP19.8■□□□□ 0.76
COL23A1-202ENST00000407622 ATP5J2-PTCD1G3V325 749 aa19.79■□□□□ 0.76
COL23A1-202ENST00000407622 PTCD1O75127 700 aaKnown RBP19.79■□□□□ 0.76
COL23A1-202ENST00000407622 CSB-PGBD3P0DP91 1061 aa19.79■□□□□ 0.76
COL23A1-202ENST00000407622 PTPN12Q05209 780 aaKnown RBP19.79■□□□□ 0.76
COL23A1-202ENST00000407622 UBE3BQ7Z3V4 1068 aa19.79■□□□□ 0.76
COL23A1-202ENST00000407622 IFNL2Q8IZJ0 200 aa19.79■□□□□ 0.76
COL23A1-202ENST00000407622 TFCP2Q12800 502 aa19.79■□□□□ 0.76
COL23A1-202ENST00000407622 ZNF500O60304 480 aaPredicted RBP19.78■□□□□ 0.76
COL23A1-202ENST00000407622 SNRPA1P09661 255 aaKnown RBP19.77■□□□□ 0.76
COL23A1-202ENST00000407622 COPRSQ9NQ92 184 aa19.77■□□□□ 0.76
COL23A1-202ENST00000407622 HCLS1P14317 486 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms