RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 NUDT16Q96DE0 195 aaKnown RBP11.09□□□□□ -0.63
PTPN12-202ENST00000407343 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
PTPN12-202ENST00000407343 CEP63Q96MT8 703 aa11.09□□□□□ -0.63
PTPN12-202ENST00000407343 CITED4Q96RK1 184 aa11.09□□□□□ -0.63
PTPN12-202ENST00000407343 NEUROD4Q9HD90 331 aa11.09□□□□□ -0.63
PTPN12-202ENST00000407343 BRPF3Q9ULD4 1205 aa11.09□□□□□ -0.63
PTPN12-202ENST00000407343 RTCBQ9Y3I0 505 aaKnown RBP11.09□□□□□ -0.63
PTPN12-202ENST00000407343 PCDHGC4Q9Y5F7 938 aa11.09□□□□□ -0.63
PTPN12-202ENST00000407343 H7C1W4 665 aa11.08□□□□□ -0.64
PTPN12-202ENST00000407343 GPR182O15218 404 aa11.08□□□□□ -0.64
PTPN12-202ENST00000407343 ATXN7O15265 892 aaPredicted RBP11.08□□□□□ -0.64
PTPN12-202ENST00000407343 NDUFB5O43674 189 aa11.08□□□□□ -0.64
PTPN12-202ENST00000407343 NANOS1Q8WY41 292 aaKnown RBP11.08□□□□□ -0.64
PTPN12-202ENST00000407343 BRD7Q9NPI1 651 aa11.08□□□□□ -0.64
PTPN12-202ENST00000407343 GJA3Q9Y6H8 435 aa11.08□□□□□ -0.64
PTPN12-202ENST00000407343 SFSWAPQ12872 951 aaKnown RBP11.07□□□□□ -0.64
PTPN12-202ENST00000407343 GRIN2CQ14957 1233 aa11.07□□□□□ -0.64
PTPN12-202ENST00000407343 FIGNL1Q6PIW4 674 aa11.07□□□□□ -0.64
PTPN12-202ENST00000407343 DCDC2BA2VCK2 349 aa11.06□□□□□ -0.64
PTPN12-202ENST00000407343 ANKRD33BA6NCL7 494 aa11.06□□□□□ -0.64
PTPN12-202ENST00000407343 MAPTP10636 758 aaKnown RBP11.06□□□□□ -0.64
PTPN12-202ENST00000407343 AAMPQ13685 434 aa11.06□□□□□ -0.64
PTPN12-202ENST00000407343 DSC3Q14574 896 aa11.06□□□□□ -0.64
PTPN12-202ENST00000407343 GTPBP3Q969Y2 492 aaKnown RBP11.06□□□□□ -0.64
PTPN12-202ENST00000407343 A6NHS1 94 aa11.05□□□□□ -0.64
PTPN12-202ENST00000407343 TREHO43280 583 aa11.05□□□□□ -0.64
PTPN12-202ENST00000407343 ABHD17AQ96GS6 310 aa11.05□□□□□ -0.64
PTPN12-202ENST00000407343 EGFRP00533 1210 aa11.04□□□□□ -0.64
PTPN12-202ENST00000407343 VWA5B2Q8N398 1253 aa11.04□□□□□ -0.64
PTPN12-202ENST00000407343 FOXD4L4Q8WXT5 416 aaPredicted RBP11.04□□□□□ -0.64
PTPN12-202ENST00000407343 PIK3R5Q8WYR1 880 aa11.04□□□□□ -0.64
PTPN12-202ENST00000407343 FAM13BQ9NYF5 915 aa11.04□□□□□ -0.64
PTPN12-202ENST00000407343 KHNYNO15037 678 aaKnown RBP11.03□□□□□ -0.64
PTPN12-202ENST00000407343 ERCC3P19447 782 aa11.03□□□□□ -0.64
PTPN12-202ENST00000407343 USP5P45974 858 aa11.03□□□□□ -0.64
PTPN12-202ENST00000407343 ALKBH8Q96BT7 664 aaKnown RBP11.03□□□□□ -0.64
PTPN12-202ENST00000407343 NXF1Q9UBU9 619 aaKnown RBP11.03□□□□□ -0.64
PTPN12-202ENST00000407343 H3BM21 787 aa11.02□□□□□ -0.65
PTPN12-202ENST00000407343 GPR25O00155 361 aa11.02□□□□□ -0.65
PTPN12-202ENST00000407343 VEGFBP49765 207 aa11.02□□□□□ -0.65
PTPN12-202ENST00000407343 FMR1Q06787 632 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTPN12-202ENST00000407343 LAMC2Q13753 1193 aa11.02□□□□□ -0.65
PTPN12-202ENST00000407343 XKR5Q6UX68 686 aa11.02□□□□□ -0.65
PTPN12-202ENST00000407343 ZSCAN29Q8IWY8 852 aaPredicted RBP11.02□□□□□ -0.65
PTPN12-202ENST00000407343 CMTR1Q8N1G2 835 aaKnown RBP11.02□□□□□ -0.65
PTPN12-202ENST00000407343 C11orf16Q9NQ32 467 aa11.02□□□□□ -0.65
PTPN12-202ENST00000407343 ATXN7L1Q9ULK2 861 aaPredicted RBP11.02□□□□□ -0.65
PTPN12-202ENST00000407343 KCNH4Q9UQ05 1017 aa11.02□□□□□ -0.65
PTPN12-202ENST00000407343 FBXO33Q7Z6M2 555 aa11.01□□□□□ -0.65
PTPN12-202ENST00000407343 GPR161Q8N6U8 529 aaKnown RBP11.01□□□□□ -0.65
PTPN12-202ENST00000407343 DMRTB1Q96MA1 342 aa11.01□□□□□ -0.65
PTPN12-202ENST00000407343 CFHR5Q9BXR6 569 aa11.01□□□□□ -0.65
PTPN12-202ENST00000407343 GAS6Q14393 721 aa11□□□□□ -0.65
PTPN12-202ENST00000407343 NPAS3Q8IXF0 933 aa11□□□□□ -0.65
PTPN12-202ENST00000407343 GSX2Q9BZM3 304 aa11□□□□□ -0.65
PTPN12-202ENST00000407343 CDC14CA4D256 554 aa10.99□□□□□ -0.65
PTPN12-202ENST00000407343 XYLBO75191 536 aa10.99□□□□□ -0.65
PTPN12-202ENST00000407343 P4HBP07237 508 aaKnown RBP10.99□□□□□ -0.65
PTPN12-202ENST00000407343 VSIG8P0DPA2 414 aa10.99□□□□□ -0.65
PTPN12-202ENST00000407343 EPB42P16452 691 aa10.99□□□□□ -0.65
PTPN12-202ENST00000407343 CD33P20138 364 aa10.99□□□□□ -0.65
PTPN12-202ENST00000407343 PDE3BQ13370 1112 aa10.99□□□□□ -0.65
PTPN12-202ENST00000407343 FAM182BQ5T319 152 aa10.99□□□□□ -0.65
PTPN12-202ENST00000407343 ZNF787Q6DD87 383 aa10.99□□□□□ -0.65
PTPN12-202ENST00000407343 SV2AQ7L0J3 742 aa10.99□□□□□ -0.65
PTPN12-202ENST00000407343 SLC30A3Q99726 388 aa10.99□□□□□ -0.65
PTPN12-202ENST00000407343 UBAP1LF5GYI3 381 aa10.98□□□□□ -0.65
PTPN12-202ENST00000407343 COL19A1Q14993 1142 aa10.98□□□□□ -0.65
PTPN12-202ENST00000407343 PDE12Q6L8Q7 609 aaKnown RBP10.98□□□□□ -0.65
PTPN12-202ENST00000407343 MARK1Q9P0L2 795 aa10.98□□□□□ -0.65
PTPN12-202ENST00000407343 TMEM63CQ9P1W3 806 aa10.98□□□□□ -0.65
PTPN12-202ENST00000407343 C2CD2LO14523 706 aa10.97□□□□□ -0.65
PTPN12-202ENST00000407343 RPLP1P05386 114 aaKnown RBP10.97□□□□□ -0.65
PTPN12-202ENST00000407343 FGFR3P22607 806 aa10.97□□□□□ -0.65
PTPN12-202ENST00000407343 CTBSQ01459 385 aa10.97□□□□□ -0.65
PTPN12-202ENST00000407343 EHHADHQ08426 723 aa10.97□□□□□ -0.65
PTPN12-202ENST00000407343 C8orf34Q49A92 452 aa10.97□□□□□ -0.65
PTPN12-202ENST00000407343 NIF3L1Q9GZT8 377 aa10.97□□□□□ -0.65
PTPN12-202ENST00000407343 ZFATQ9P243 1243 aa10.97□□□□□ -0.65
PTPN12-202ENST00000407343 AMOTL2Q9Y2J4 779 aa10.97□□□□□ -0.65
PTPN12-202ENST00000407343 ERBB4Q15303 1308 aa10.96□□□□□ -0.65
PTPN12-202ENST00000407343 PCSK2P16519 638 aa10.96□□□□□ -0.65
PTPN12-202ENST00000407343 TAGLNQ01995 201 aaKnown RBP10.96□□□□□ -0.65
PTPN12-202ENST00000407343 LCE2CQ5TA81 110 aa10.96□□□□□ -0.65
PTPN12-202ENST00000407343 FOXD3Q9UJU5 478 aaPredicted RBP10.96□□□□□ -0.65
PTPN12-202ENST00000407343 TNFRSF21O75509 655 aa10.95□□□□□ -0.66
PTPN12-202ENST00000407343 SPEM2Q0P670 501 aa10.95□□□□□ -0.66
PTPN12-202ENST00000407343 ORC1Q13415 861 aa10.95□□□□□ -0.66
PTPN12-202ENST00000407343 CCINQ13939 588 aa10.95□□□□□ -0.66
PTPN12-202ENST00000407343 CHRDQ9H2X0 955 aa10.95□□□□□ -0.66
PTPN12-202ENST00000407343 ELP3Q9H9T3 547 aa10.95□□□□□ -0.66
PTPN12-202ENST00000407343 FNDC3AQ9Y2H6 1198 aaKnown RBP10.95□□□□□ -0.66
PTPN12-202ENST00000407343 RBM47A0AV96 593 aaKnown RBP10.94□□□□□ -0.66
PTPN12-202ENST00000407343 TERTO14746 1132 aaKnown RBP10.94□□□□□ -0.66
PTPN12-202ENST00000407343 SASH3O75995 380 aa10.94□□□□□ -0.66
PTPN12-202ENST00000407343 TARSP26639 723 aaKnown RBP10.94□□□□□ -0.66
PTPN12-202ENST00000407343 NLRP13Q86W25 1043 aa10.94□□□□□ -0.66
PTPN12-202ENST00000407343 TMC1Q8TDI8 760 aa10.94□□□□□ -0.66
PTPN12-202ENST00000407343 ZNF428Q96B54 188 aa10.94□□□□□ -0.66
PTPN12-202ENST00000407343 ZNF438Q7Z4V0 828 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms