RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CCDC191Q8NCU4 936 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 NAPBQ9H115 298 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 PTCH1Q13635 1447 aa5.59□□□□□ -1.51
PCDH11X-207ENST00000406881 LMTK3Q96Q04 1460 aa5.59□□□□□ -1.52
PCDH11X-207ENST00000406881 ZNF213O14771 459 aa5.59□□□□□ -1.52
PCDH11X-207ENST00000406881 STK3Q13188 491 aa5.59□□□□□ -1.52
PCDH11X-207ENST00000406881 NOL7Q9UMY1 257 aaKnown RBP5.59□□□□□ -1.52
PCDH11X-207ENST00000406881 PTPRMP28827 1452 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 UBAP1LF5GYI3 381 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 GOLIM4O00461 696 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 FOSBP53539 338 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 SF3B2Q13435 895 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 ATP2B3Q16720 1220 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 CCDC83Q8IWF9 413 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 SLF2Q8IX21 1173 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 SPATA32Q96LK8 384 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 POLR1AO95602 1720 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 DIP2BQ9P265 1576 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 GIGYF1O75420 1035 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 LDHCP07864 332 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 PHKG2P15735 406 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 TXLNAP40222 546 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 CWF19L2Q2TBE0 894 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 BICDL1Q6ZP65 573 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 C16orf71Q8IYS4 520 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 NEK1Q96PY6 1258 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 CTDP1Q9Y5B0 961 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 IQGAP1P46940 1657 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 CHMLP26374 656 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 PIP4K2AP48426 406 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 MCMDC2Q4G0Z9 681 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 PARP10Q53GL7 1025 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 SPTY2D1Q68D10 685 aaPredicted RBP5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 TNPO1Q92973 898 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 UTP14AQ9BVJ6 771 aaKnown RBP5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 GRPEL1Q9HAV7 217 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 BTG4Q9NY30 223 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 ABCF2Q9UG63 623 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 PIK3C2BO00750 1634 aa5.58□□□□□ -1.52
PCDH11X-207ENST00000406881 CLTCQ00610 1675 aaKnown RBP5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 ATP6V1AP38606 617 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 VPS53Q5VIR6 699 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 DZIP3Q86Y13 1208 aaKnown RBP5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 NYXQ9GZU5 481 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 TECPR2O15040 1411 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 NCAPD2Q15021 1401 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 TULP1O00294 542 aaPredicted RBP5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 DDX46Q7L014 1031 aaKnown RBP5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 SSH3Q8TE77 659 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 INTS4Q96HW7 963 aaKnown RBP5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 AK7Q96M32 723 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 USP26Q9BXU7 913 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 TNMDQ9H2S6 317 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 FAM13BQ9NYF5 915 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 KDRP35968 1356 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 CDC42BPGQ6DT37 1551 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 ME1P48163 572 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 ZNF496Q96IT1 587 aaPredicted RBP5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 TMX3Q96JJ7 454 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 NUP62CLQ9H1M0 184 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 BICC1Q9H694 974 aaKnown RBP5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 DACH1Q9UI36 760 aa5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 RBM8AQ9Y5S9 174 aaKnown RBP5.57□□□□□ -1.52
PCDH11X-207ENST00000406881 SPATA31D1Q6ZQQ2 1576 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 SSFA2P28290 1259 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 GCKRQ14397 625 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 TSHZ3Q63HK5 1081 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 ANKRD18AQ8IVF6 992 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 NCOA7Q8NI08 942 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 RPGRQ92834 1020 aaKnown RBP5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 CARD10Q9BWT7 1032 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 CEP131Q9UPN4 1083 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 ADGRB1O14514 1584 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 EYA2O00167 538 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 BAG4O95429 457 aaKnown RBP5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 IQCA1Q86XH1 822 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 PA2G4Q9UQ80 394 aaKnown RBP5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 FRMPD1Q5SYB0 1578 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 CTAGE5O15320 804 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 STX6O43752 255 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 IPO7O95373 1038 aaKnown RBP5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 CCDC183Q5T5S1 534 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 SOGA3Q5TF21 947 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 DZIP1Q86YF9 867 aaKnown RBP5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 RNF214Q8ND24 703 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 NUP133Q8WUM0 1156 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 NLRP3Q96P20 1036 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 PAG1Q9NWQ8 432 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 IRS4O14654 1257 aaPredicted RBP5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 RAD21O60216 631 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 MCM5P33992 734 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 RFC4P35249 363 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 CREBRFQ8IUR6 639 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 FAM43AQ8N2R8 423 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 ZGPATQ8N5A5 531 aaKnown RBP5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 PTPRUQ92729 1446 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 C8orf76Q96K31 380 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 SETDB2Q96T68 719 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 USP44Q9H0E7 712 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms