RNA–Protein interactions for RNA: ENST00000405727.6

ARFIP1-203, Transcript of ADP ribosylation factor interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene ARFIP1, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFIP1-203ENST00000405727 RTL5Q5HYW3 569 aaPredicted RBP17.47■□□□□ 0.39
ARFIP1-203ENST00000405727 NOP58Q9Y2X3 529 aaKnown RBP17.47■□□□□ 0.39
ARFIP1-203ENST00000405727 CAMTA2O94983 1202 aa17.47■□□□□ 0.39
ARFIP1-203ENST00000405727 RC3H1Q5TC82 1133 aaKnown RBP17.47■□□□□ 0.39
ARFIP1-203ENST00000405727 NLRP10Q86W26 655 aa17.47■□□□□ 0.39
ARFIP1-203ENST00000405727 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
ARFIP1-203ENST00000405727 OTUD7AQ8TE49 926 aaPredicted RBP17.47■□□□□ 0.39
ARFIP1-203ENST00000405727 TRIM37O94972 964 aa17.46■□□□□ 0.39
ARFIP1-203ENST00000405727 FOXO4P98177 505 aa17.46■□□□□ 0.39
ARFIP1-203ENST00000405727 HSP90AB4PQ58FF6 505 aa17.46■□□□□ 0.39
ARFIP1-203ENST00000405727 PA2G4Q9UQ80 394 aaKnown RBP17.46■□□□□ 0.39
ARFIP1-203ENST00000405727 PCCAP05165 728 aaPredicted RBP17.45■□□□□ 0.38
ARFIP1-203ENST00000405727 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
ARFIP1-203ENST00000405727 RGS17Q9UGC6 210 aaPredicted RBP17.45■□□□□ 0.38
ARFIP1-203ENST00000405727 C4BP0C0L5 1744 aa17.44■□□□□ 0.38
ARFIP1-203ENST00000405727 LMBR1LQ6UX01 489 aa17.44■□□□□ 0.38
ARFIP1-203ENST00000405727 ZNF34Q8IZ26 560 aa17.44■□□□□ 0.38
ARFIP1-203ENST00000405727 ZBTB38Q8NAP3 1195 aaPredicted RBP17.44■□□□□ 0.38
ARFIP1-203ENST00000405727 RHPN1Q8TCX5 695 aa17.44■□□□□ 0.38
ARFIP1-203ENST00000405727 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
ARFIP1-203ENST00000405727 FAM89AQ96GI7 184 aa17.43■□□□□ 0.38
ARFIP1-203ENST00000405727 IL1RAPL2Q9NP60 686 aa17.43■□□□□ 0.38
ARFIP1-203ENST00000405727 SCN7AQ01118 1682 aa17.43■□□□□ 0.38
ARFIP1-203ENST00000405727 UBN2Q6ZU65 1347 aa17.43■□□□□ 0.38
ARFIP1-203ENST00000405727 RFX5P48382 616 aaPredicted RBP17.43■□□□□ 0.38
ARFIP1-203ENST00000405727 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
ARFIP1-203ENST00000405727 GNPATO15228 680 aa17.42■□□□□ 0.38
ARFIP1-203ENST00000405727 RPS6KA4O75676 772 aa17.42■□□□□ 0.38
ARFIP1-203ENST00000405727 ERC1Q8IUD2 1116 aa17.42■□□□□ 0.38
ARFIP1-203ENST00000405727 KLHDC4Q8TBB5 520 aa17.42■□□□□ 0.38
ARFIP1-203ENST00000405727 G3BP1Q13283 466 aaKnown RBP eCLIP17.41■□□□□ 0.38
ARFIP1-203ENST00000405727 TTC22Q5TAA0 569 aa17.41■□□□□ 0.38
ARFIP1-203ENST00000405727 POTEAQ6S8J7 498 aa17.41■□□□□ 0.38
ARFIP1-203ENST00000405727 SMIM5Q71RC9 77 aa17.41■□□□□ 0.38
ARFIP1-203ENST00000405727 SIL1Q9H173 461 aa17.41■□□□□ 0.38
ARFIP1-203ENST00000405727 LRRC4BQ9NT99 713 aa17.41■□□□□ 0.38
ARFIP1-203ENST00000405727 ZNF652Q9Y2D9 606 aa17.41■□□□□ 0.38
ARFIP1-203ENST00000405727 CHMP3Q9Y3E7 222 aa17.41■□□□□ 0.38
ARFIP1-203ENST00000405727 SALL3Q9BXA9 1300 aa17.41■□□□□ 0.38
ARFIP1-203ENST00000405727 CDHR2Q9BYE9 1310 aa17.41■□□□□ 0.38
ARFIP1-203ENST00000405727 PLA2G12BQ9BX93 195 aa17.4■□□□□ 0.38
ARFIP1-203ENST00000405727 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
ARFIP1-203ENST00000405727 TRMT112Q9UI30 125 aaKnown RBP17.4■□□□□ 0.38
ARFIP1-203ENST00000405727 GSPT1P15170 499 aaKnown RBP17.39■□□□□ 0.38
ARFIP1-203ENST00000405727 PDE1AP54750 535 aa17.39■□□□□ 0.38
ARFIP1-203ENST00000405727 PTPN12Q05209 780 aaKnown RBP17.39■□□□□ 0.38
ARFIP1-203ENST00000405727 SYNE4Q8N205 404 aa17.39■□□□□ 0.38
ARFIP1-203ENST00000405727 RTCBQ9Y3I0 505 aaKnown RBP17.39■□□□□ 0.38
ARFIP1-203ENST00000405727 MX1P20591 662 aa17.39■□□□□ 0.37
ARFIP1-203ENST00000405727 PARP10Q53GL7 1025 aa17.39■□□□□ 0.37
ARFIP1-203ENST00000405727 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
ARFIP1-203ENST00000405727 SUSD4Q5VX71 490 aa17.39■□□□□ 0.37
ARFIP1-203ENST00000405727 AK7Q96M32 723 aa17.39■□□□□ 0.37
ARFIP1-203ENST00000405727 OSBPL3Q9H4L5 887 aa17.39■□□□□ 0.37
ARFIP1-203ENST00000405727 NIP7Q9Y221 180 aaKnown RBP eCLIP17.39■□□□□ 0.37
ARFIP1-203ENST00000405727 MYH3P11055 1940 aa17.38■□□□□ 0.37
ARFIP1-203ENST00000405727 C4AP0C0L4 1744 aa17.38■□□□□ 0.37
ARFIP1-203ENST00000405727 SASH1O94885 1247 aa17.38■□□□□ 0.37
ARFIP1-203ENST00000405727 CLEC4GQ6UXB4 293 aa17.38■□□□□ 0.37
ARFIP1-203ENST00000405727 AMIGO3Q86WK7 504 aa17.38■□□□□ 0.37
ARFIP1-203ENST00000405727 NUTM1Q86Y26 1132 aa17.38■□□□□ 0.37
ARFIP1-203ENST00000405727 IRS4O14654 1257 aaPredicted RBP17.37■□□□□ 0.37
ARFIP1-203ENST00000405727 RGL2O15211 777 aa17.37■□□□□ 0.37
ARFIP1-203ENST00000405727 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
ARFIP1-203ENST00000405727 UTP14AQ9BVJ6 771 aaKnown RBP17.37■□□□□ 0.37
ARFIP1-203ENST00000405727 STAP2Q9UGK3 403 aa17.37■□□□□ 0.37
ARFIP1-203ENST00000405727 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
ARFIP1-203ENST00000405727 NARFQ9UHQ1 456 aa17.37■□□□□ 0.37
ARFIP1-203ENST00000405727 TUBGCP6Q96RT7 1819 aa17.37■□□□□ 0.37
ARFIP1-203ENST00000405727 FAM177BA6PVY3 158 aa17.36■□□□□ 0.37
ARFIP1-203ENST00000405727 USPL1Q5W0Q7 1092 aa17.36■□□□□ 0.37
ARFIP1-203ENST00000405727 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
ARFIP1-203ENST00000405727 UBR3Q6ZT12 1888 aa17.36■□□□□ 0.37
ARFIP1-203ENST00000405727 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
ARFIP1-203ENST00000405727 SEC24BO95487 1268 aa17.36■□□□□ 0.37
ARFIP1-203ENST00000405727 CSF1RP07333 972 aa17.36■□□□□ 0.37
ARFIP1-203ENST00000405727 CTSWP56202 376 aa17.36■□□□□ 0.37
ARFIP1-203ENST00000405727 BCL2L12Q9HB09 334 aa17.36■□□□□ 0.37
ARFIP1-203ENST00000405727 LAMB2P55268 1798 aa17.35■□□□□ 0.37
ARFIP1-203ENST00000405727 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
ARFIP1-203ENST00000405727 AOX1Q06278 1338 aa17.35■□□□□ 0.37
ARFIP1-203ENST00000405727 ZPR1O75312 459 aa17.35■□□□□ 0.37
ARFIP1-203ENST00000405727 PHF14O94880 888 aa17.35■□□□□ 0.37
ARFIP1-203ENST00000405727 NTSR2O95665 410 aa17.35■□□□□ 0.37
ARFIP1-203ENST00000405727 ARHGEF1Q92888 912 aaKnown RBP17.35■□□□□ 0.37
ARFIP1-203ENST00000405727 CCDC85AQ96PX6 553 aaPredicted RBP17.35■□□□□ 0.37
ARFIP1-203ENST00000405727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.35■□□□□ 0.37
ARFIP1-203ENST00000405727 DDX60Q8IY21 1712 aaKnown RBP17.35■□□□□ 0.37
ARFIP1-203ENST00000405727 PDE8AO60658 829 aa17.34■□□□□ 0.37
ARFIP1-203ENST00000405727 TXNRD1Q16881 649 aa17.34■□□□□ 0.37
ARFIP1-203ENST00000405727 CCDC57Q2TAC2 916 aa17.34■□□□□ 0.37
ARFIP1-203ENST00000405727 ZNF594Q96JF6 807 aaPredicted RBP17.34■□□□□ 0.37
ARFIP1-203ENST00000405727 APBA3O96018 575 aa17.33■□□□□ 0.37
ARFIP1-203ENST00000405727 TRAPPC3LQ5T215 181 aa17.33■□□□□ 0.37
ARFIP1-203ENST00000405727 TBC1D9BQ66K14 1250 aa17.33■□□□□ 0.37
ARFIP1-203ENST00000405727 AACSQ86V21 672 aa17.33■□□□□ 0.37
ARFIP1-203ENST00000405727 PROM2Q8N271 834 aa17.33■□□□□ 0.37
ARFIP1-203ENST00000405727 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.37
ARFIP1-203ENST00000405727 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.36
ARFIP1-203ENST00000405727 USP42Q9H9J4 1324 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms