RNA–Protein interactions for RNA: ENST00000405531.7

C12orf40-202, Transcript of chromosome 12 open reading frame 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C12orf40, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40-202ENST00000405531 SYNE4Q8N205 404 aa21.33■■□□□ 1
C12orf40-202ENST00000405531 STYK1Q6J9G0 422 aa21.32■■□□□ 1
C12orf40-202ENST00000405531 PPP1R42Q7Z4L9 355 aa21.32■■□□□ 1
C12orf40-202ENST00000405531 MASTLQ96GX5 879 aa21.32■■□□□ 1
C12orf40-202ENST00000405531 ISCA1Q9BUE6 129 aa21.32■■□□□ 1
C12orf40-202ENST00000405531 UTP14AQ9BVJ6 771 aaKnown RBP21.32■■□□□ 1
C12orf40-202ENST00000405531 ZNF219Q9P2Y4 722 aaPredicted RBP21.32■■□□□ 1
C12orf40-202ENST00000405531 SLX4Q8IY92 1834 aa21.32■■□□□ 1
C12orf40-202ENST00000405531 ADCY9O60503 1353 aa21.32■■□□□ 1
C12orf40-202ENST00000405531 RIC3Q7Z5B4 369 aa21.31■■□□□ 1
C12orf40-202ENST00000405531 ZNF784Q8NCA9 323 aaPredicted RBP21.31■■□□□ 1
C12orf40-202ENST00000405531 STK31Q9BXU1 1019 aa21.31■■□□□ 1
C12orf40-202ENST00000405531 PRPF40BQ6NWY9 871 aaKnown RBP21.31■■□□□ 1
C12orf40-202ENST00000405531 RASSF7Q02833 373 aa21.3■■□□□ 1
C12orf40-202ENST00000405531 CRY2Q49AN0 593 aa21.3■■□□□ 1
C12orf40-202ENST00000405531 C21orf2O43822 256 aa21.29■■□□□ 1
C12orf40-202ENST00000405531 SLC4A2P04920 1241 aa21.29■■□□□ 1
C12orf40-202ENST00000405531 NPR1P16066 1061 aa21.29■■□□□ 1
C12orf40-202ENST00000405531 CDCA7LQ96GN5 454 aa21.29■■□□□ 1
C12orf40-202ENST00000405531 CHMP4AQ9BY43 222 aa21.29■■□□□ 1
C12orf40-202ENST00000405531 CNKSR1Q969H4 720 aa21.28■■□□□ 1
C12orf40-202ENST00000405531 MYD88Q99836 296 aa21.28■■□□□ 1
C12orf40-202ENST00000405531 TRMT112Q9UI30 125 aaKnown RBP21.28■■□□□ 1
C12orf40-202ENST00000405531 NFKBIEO00221 500 aa21.28■■□□□ 1
C12orf40-202ENST00000405531 HCLS1P14317 486 aaPredicted RBP21.28■■□□□ 1
C12orf40-202ENST00000405531 PRELPP51888 382 aa21.28■■□□□ 1
C12orf40-202ENST00000405531 MAP3K2Q9Y2U5 619 aa21.28■■□□□ 1
C12orf40-202ENST00000405531 RNF123Q5XPI4 1314 aa21.27■■□□□ 1
C12orf40-202ENST00000405531 SLC51AQ86UW1 340 aa21.27■■□□□ 1
C12orf40-202ENST00000405531 LAMB2P55268 1798 aa21.26■□□□□ 0.99
C12orf40-202ENST00000405531 SH3TC1Q8TE82 1336 aa21.26■□□□□ 0.99
C12orf40-202ENST00000405531 PI4KAP2A4QPH2 592 aa21.26■□□□□ 0.99
C12orf40-202ENST00000405531 E9PSI1 815 aa21.26■□□□□ 0.99
C12orf40-202ENST00000405531 DDX58O95786 925 aaKnown RBP21.26■□□□□ 0.99
C12orf40-202ENST00000405531 SLFN5Q08AF3 891 aa21.26■□□□□ 0.99
C12orf40-202ENST00000405531 SLC10A5Q5PT55 438 aa21.26■□□□□ 0.99
C12orf40-202ENST00000405531 OLFM4Q6UX06 510 aa21.26■□□□□ 0.99
C12orf40-202ENST00000405531 PI4KAP1Q8N8J0 262 aa21.26■□□□□ 0.99
C12orf40-202ENST00000405531 DDX60Q8IY21 1712 aaKnown RBP21.26■□□□□ 0.99
C12orf40-202ENST00000405531 FLIIQ13045 1269 aa21.25■□□□□ 0.99
C12orf40-202ENST00000405531 TRIM28Q13263 835 aaKnown RBP21.25■□□□□ 0.99
C12orf40-202ENST00000405531 RTL5Q5HYW3 569 aaPredicted RBP21.25■□□□□ 0.99
C12orf40-202ENST00000405531 KSR2Q6VAB6 950 aa21.25■□□□□ 0.99
C12orf40-202ENST00000405531 FAM89AQ96GI7 184 aa21.25■□□□□ 0.99
C12orf40-202ENST00000405531 METTL22Q9BUU2 404 aaPredicted RBP21.25■□□□□ 0.99
C12orf40-202ENST00000405531 C9orf131Q5VYM1 1079 aa21.24■□□□□ 0.99
C12orf40-202ENST00000405531 C7orf43Q8WVR3 580 aa21.24■□□□□ 0.99
C12orf40-202ENST00000405531 RPGRQ92834 1020 aaKnown RBP21.24■□□□□ 0.99
C12orf40-202ENST00000405531 SBF1O95248 1867 aa21.23■□□□□ 0.99
C12orf40-202ENST00000405531 FER1L6Q2WGJ9 1857 aa21.23■□□□□ 0.99
C12orf40-202ENST00000405531 IGKV5-2P06315 115 aa21.23■□□□□ 0.99
C12orf40-202ENST00000405531 NLRP3Q96P20 1036 aa21.23■□□□□ 0.99
C12orf40-202ENST00000405531 HOXA10P31260 410 aaPredicted RBP21.22■□□□□ 0.99
C12orf40-202ENST00000405531 RNF181Q9P0P0 153 aa21.22■□□□□ 0.99
C12orf40-202ENST00000405531 FKBP5Q13451 457 aaPredicted RBP21.21■□□□□ 0.99
C12orf40-202ENST00000405531 JARID2Q92833 1246 aaPredicted RBP21.21■□□□□ 0.99
C12orf40-202ENST00000405531 ALDH1B1P30837 517 aa21.21■□□□□ 0.99
C12orf40-202ENST00000405531 TRMT2AQ8IZ69 625 aaKnown RBP21.21■□□□□ 0.99
C12orf40-202ENST00000405531 ZNF526Q8TF50 670 aaPredicted RBP21.21■□□□□ 0.99
C12orf40-202ENST00000405531 SNED1Q8TER0 1413 aa21.2■□□□□ 0.98
C12orf40-202ENST00000405531 CWF19L2Q2TBE0 894 aaKnown RBP21.2■□□□□ 0.98
C12orf40-202ENST00000405531 CCDC191Q8NCU4 936 aa21.2■□□□□ 0.98
C12orf40-202ENST00000405531 CWC25Q9NXE8 425 aaPredicted RBP21.2■□□□□ 0.98
C12orf40-202ENST00000405531 CACNA1FO60840 1977 aa21.2■□□□□ 0.98
C12orf40-202ENST00000405531 COL4A1P02462 1669 aa21.2■□□□□ 0.98
C12orf40-202ENST00000405531 RBM17Q96I25 401 aaKnown RBP21.19■□□□□ 0.98
C12orf40-202ENST00000405531 ABCC4O15439 1325 aa21.19■□□□□ 0.98
C12orf40-202ENST00000405531 IRS4O14654 1257 aaPredicted RBP21.18■□□□□ 0.98
C12orf40-202ENST00000405531 CCDC93Q567U6 631 aa21.18■□□□□ 0.98
C12orf40-202ENST00000405531 ZBTB38Q8NAP3 1195 aaPredicted RBP21.18■□□□□ 0.98
C12orf40-202ENST00000405531 CRAMP1Q96RY5 1269 aa21.18■□□□□ 0.98
C12orf40-202ENST00000405531 F6X3S4 739 aa21.18■□□□□ 0.98
C12orf40-202ENST00000405531 LMNB1P20700 586 aa21.18■□□□□ 0.98
C12orf40-202ENST00000405531 TAOK3Q9H2K8 898 aa21.18■□□□□ 0.98
C12orf40-202ENST00000405531 TIAM2Q8IVF5 1701 aa21.17■□□□□ 0.98
C12orf40-202ENST00000405531 NEURL1BA8MQ27 555 aa21.17■□□□□ 0.98
C12orf40-202ENST00000405531 PCCAP05165 728 aaPredicted RBP21.17■□□□□ 0.98
C12orf40-202ENST00000405531 DNAAF4Q8WXU2 420 aa21.17■□□□□ 0.98
C12orf40-202ENST00000405531 TAF1P21675 1872 aa21.17■□□□□ 0.98
C12orf40-202ENST00000405531 CCDC88AQ3V6T2 1871 aa21.17■□□□□ 0.98
C12orf40-202ENST00000405531 PPEF1O14829 653 aaPredicted RBP21.16■□□□□ 0.98
C12orf40-202ENST00000405531 HNRNPUQ00839 825 aaKnown RBP eCLIP21.16■□□□□ 0.98
C12orf40-202ENST00000405531 NEXNQ0ZGT2 675 aa21.16■□□□□ 0.98
C12orf40-202ENST00000405531 SOGA3Q5TF21 947 aa21.16■□□□□ 0.98
C12orf40-202ENST00000405531 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
C12orf40-202ENST00000405531 MRPL50Q8N5N7 158 aaKnown RBP21.15■□□□□ 0.98
C12orf40-202ENST00000405531 SSH1Q8WYL5 1049 aa21.15■□□□□ 0.98
C12orf40-202ENST00000405531 BCL2L13Q9BXK5 485 aa21.15■□□□□ 0.98
C12orf40-202ENST00000405531 SF3B3Q15393 1217 aaKnown RBP21.14■□□□□ 0.97
C12orf40-202ENST00000405531 DDX46Q7L014 1031 aaKnown RBP21.13■□□□□ 0.97
C12orf40-202ENST00000405531 GPBP1L1Q9HC44 474 aaPredicted RBP21.13■□□□□ 0.97
C12orf40-202ENST00000405531 FKBP4Q02790 459 aaKnown RBP eCLIP21.12■□□□□ 0.97
C12orf40-202ENST00000405531 GRAPQ13588 217 aa21.12■□□□□ 0.97
C12orf40-202ENST00000405531 GRAPLQ8TC17 118 aaPredicted RBP21.12■□□□□ 0.97
C12orf40-202ENST00000405531 ZNF277Q9NRM2 450 aaPredicted RBP21.12■□□□□ 0.97
C12orf40-202ENST00000405531 GCKRQ14397 625 aa21.12■□□□□ 0.97
C12orf40-202ENST00000405531 LINS1Q8NG48 757 aa21.12■□□□□ 0.97
C12orf40-202ENST00000405531 CELF1Q92879 486 aaKnown RBP21.12■□□□□ 0.97
C12orf40-202ENST00000405531 CDHR2Q9BYE9 1310 aa21.11■□□□□ 0.97
C12orf40-202ENST00000405531 BEND3Q5T5X7 828 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms