RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ATP7BP35670 1465 aa11.33□□□□□ -0.6
SMC1B-202ENST00000404354 REREQ9P2R6 1566 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 KIF20BQ96Q89 1820 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 H3BQV1 296 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 IFFO2Q5TF58 517 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 BLOC1S2Q6QNY1 142 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 LEO1Q8WVC0 666 aaPredicted RBP11.32□□□□□ -0.6
SMC1B-202ENST00000404354 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 A0A0D9SFI3 127 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 BECN2A8MW95 431 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 GLRX3O76003 335 aaKnown RBP11.32□□□□□ -0.6
SMC1B-202ENST00000404354 ELF2Q15723 593 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 VPS53Q5VIR6 699 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 ISM2Q6H9L7 571 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 C11orf57Q6ZUT1 292 aaPredicted RBP11.32□□□□□ -0.6
SMC1B-202ENST00000404354 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
SMC1B-202ENST00000404354 HECW2Q9P2P5 1572 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 ZSWIM6Q9HCJ5 1215 aa11.32□□□□□ -0.6
SMC1B-202ENST00000404354 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
SMC1B-202ENST00000404354 CTIFO43310 598 aaKnown RBP11.31□□□□□ -0.6
SMC1B-202ENST00000404354 SKILP12757 684 aa11.31□□□□□ -0.6
SMC1B-202ENST00000404354 SLFNL1Q499Z3 407 aa11.31□□□□□ -0.6
SMC1B-202ENST00000404354 CCDC129Q6ZRS4 1044 aa11.31□□□□□ -0.6
SMC1B-202ENST00000404354 ECHDC1Q9NTX5 307 aa11.31□□□□□ -0.6
SMC1B-202ENST00000404354 CDC42BPGQ6DT37 1551 aa11.31□□□□□ -0.6
SMC1B-202ENST00000404354 CYB5RLQ6IPT4 315 aa11.31□□□□□ -0.6
SMC1B-202ENST00000404354 BRF1Q92994 677 aa11.31□□□□□ -0.6
SMC1B-202ENST00000404354 SLC27A2O14975 620 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 ZNF589Q86UQ0 364 aaPredicted RBP11.3□□□□□ -0.6
SMC1B-202ENST00000404354 DNAAF4Q8WXU2 420 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 CCDC171Q6TFL3 1326 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 MLH3Q9UHC1 1453 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 SMTNL1A8MU46 457 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 KIF20AO95235 890 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 CCT2P78371 535 aaKnown RBP11.3□□□□□ -0.6
SMC1B-202ENST00000404354 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 MPRIPQ6WCQ1 1025 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 SSH2Q76I76 1423 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 CHST3Q7LGC8 479 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 SEC62Q99442 399 aaKnown RBP11.3□□□□□ -0.6
SMC1B-202ENST00000404354 ESF1Q9H501 851 aaKnown RBP11.3□□□□□ -0.6
SMC1B-202ENST00000404354 OGFRQ9NZT2 677 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 ANKRD26Q9UPS8 1709 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 BIN1O00499 593 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 TPM3P06753 285 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 PTPN14Q15678 1187 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 TMX1Q9H3N1 280 aa11.3□□□□□ -0.6
SMC1B-202ENST00000404354 RIMS1Q86UR5 1692 aaKnown RBP11.3□□□□□ -0.6
SMC1B-202ENST00000404354 PIP4K2AP48426 406 aaPredicted RBP11.29□□□□□ -0.6
SMC1B-202ENST00000404354 NECTIN1Q15223 517 aa11.29□□□□□ -0.6
SMC1B-202ENST00000404354 PROSER3Q2NL68 480 aa11.29□□□□□ -0.6
SMC1B-202ENST00000404354 GTF3C6Q969F1 213 aa11.29□□□□□ -0.6
SMC1B-202ENST00000404354 EAF2Q96CJ1 260 aaPredicted RBP11.29□□□□□ -0.6
SMC1B-202ENST00000404354 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
SMC1B-202ENST00000404354 SH2B1Q9NRF2 756 aaPredicted RBP11.29□□□□□ -0.6
SMC1B-202ENST00000404354 LRRN4CLQ8ND94 238 aa11.29□□□□□ -0.6
SMC1B-202ENST00000404354 RAB11FIP4Q86YS3 637 aa11.29□□□□□ -0.6
SMC1B-202ENST00000404354 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
SMC1B-202ENST00000404354 MAP3K2Q9Y2U5 619 aa11.29□□□□□ -0.6
SMC1B-202ENST00000404354 CCDC69A6NI79 296 aa11.28□□□□□ -0.6
SMC1B-202ENST00000404354 POLA2Q14181 598 aa11.28□□□□□ -0.6
SMC1B-202ENST00000404354 FBXO38Q6PIJ6 1188 aa11.28□□□□□ -0.6
SMC1B-202ENST00000404354 LRRC8AQ8IWT6 810 aa11.28□□□□□ -0.6
SMC1B-202ENST00000404354 DNAJC2Q99543 621 aaKnown RBP11.28□□□□□ -0.6
SMC1B-202ENST00000404354 TEFQ10587 303 aa11.28□□□□□ -0.6
SMC1B-202ENST00000404354 ERCC6LQ2NKX8 1250 aa11.28□□□□□ -0.6
SMC1B-202ENST00000404354 KIF18AQ8NI77 898 aa11.28□□□□□ -0.6
SMC1B-202ENST00000404354 SCAND2PQ9GZW5 306 aaPredicted RBP11.28□□□□□ -0.6
SMC1B-202ENST00000404354 CLSTN2Q9H4D0 955 aa11.28□□□□□ -0.6
SMC1B-202ENST00000404354 PPP6R1Q9UPN7 881 aa11.28□□□□□ -0.6
SMC1B-202ENST00000404354 TOB2Q14106 344 aaPredicted RBP11.27□□□□□ -0.6
SMC1B-202ENST00000404354 BEND3Q5T5X7 828 aa11.27□□□□□ -0.6
SMC1B-202ENST00000404354 OTUD7BQ6GQQ9 843 aa11.27□□□□□ -0.6
SMC1B-202ENST00000404354 PLA2G4DQ86XP0 818 aa11.27□□□□□ -0.6
SMC1B-202ENST00000404354 NCOA5Q9HCD5 579 aaKnown RBP11.27□□□□□ -0.6
SMC1B-202ENST00000404354 CCAR1Q8IX12 1150 aaKnown RBP11.27□□□□□ -0.61
SMC1B-202ENST00000404354 AOPEPQ8N6M6 819 aa11.27□□□□□ -0.61
SMC1B-202ENST00000404354 DDX41Q9UJV9 622 aaKnown RBP11.27□□□□□ -0.61
SMC1B-202ENST00000404354 NPHP3Q7Z494 1330 aa11.27□□□□□ -0.61
SMC1B-202ENST00000404354 SLFN14P0C7P3 912 aa11.27□□□□□ -0.61
SMC1B-202ENST00000404354 G3BP1Q13283 466 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMC1B-202ENST00000404354 FEZ1Q99689 392 aa11.27□□□□□ -0.61
SMC1B-202ENST00000404354 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
SMC1B-202ENST00000404354 SETD1BQ9UPS6 1966 aaKnown RBP11.26□□□□□ -0.61
SMC1B-202ENST00000404354 POLR3GO15318 223 aaPredicted RBP11.26□□□□□ -0.61
SMC1B-202ENST00000404354 SMC2O95347 1197 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 PDCP20941 246 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 ME1P48163 572 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 HSP90AA4PQ58FG1 418 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 Q6ZUG5 572 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 GPATCH3Q96I76 525 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 EPC1Q9H2F5 836 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 DDX19AQ9NUU7 478 aaKnown RBP11.26□□□□□ -0.61
SMC1B-202ENST00000404354 GOLGA8FQ08AF8 430 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 GOLGA8DPQ0D2H9 430 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 SYT10Q6XYQ8 523 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 EVI5LQ96CN4 794 aa11.26□□□□□ -0.61
SMC1B-202ENST00000404354 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms