RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 SPATA31A1Q5TZJ5 1347 aa7.89□□□□□ -1.15
CEACAM1-207ENST00000403444 DDX60Q8IY21 1712 aaKnown RBP7.89□□□□□ -1.15
CEACAM1-207ENST00000403444 LOC102724159A0A0B4J2E5 919 aa7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 SYCE3A1L190 88 aa7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 SDSP20132 328 aa7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 PIP4K2AP48426 406 aaPredicted RBP7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 PWP2Q15269 919 aaKnown RBP7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 SMC5Q8IY18 1101 aa7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 ANKRD24Q8TF21 1146 aa7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 API5Q9BZZ5 524 aaKnown RBP7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 GSPT1P15170 499 aaKnown RBP7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 KDM4AO75164 1064 aa7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 SURF6O75683 361 aaKnown RBP7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 MRE11P49959 708 aa7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 BANK1Q8NDB2 785 aa7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 TCEANC2Q96MN5 208 aa7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 SIL1Q9H173 461 aa7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 THRAP3Q9Y2W1 955 aaKnown RBP7.88□□□□□ -1.15
CEACAM1-207ENST00000403444 MTHFSDQ2M296 383 aaKnown RBP7.87□□□□□ -1.15
CEACAM1-207ENST00000403444 EP400Q96L91 3159 aa7.87□□□□□ -1.15
CEACAM1-207ENST00000403444 ST18O60284 1047 aa7.87□□□□□ -1.15
CEACAM1-207ENST00000403444 TERF1P54274 439 aa7.87□□□□□ -1.15
CEACAM1-207ENST00000403444 HDAC1Q13547 482 aaPredicted RBP7.87□□□□□ -1.15
CEACAM1-207ENST00000403444 CABLES1Q8TDN4 633 aa7.87□□□□□ -1.15
CEACAM1-207ENST00000403444 MYH14Q7Z406 1995 aaKnown RBP7.87□□□□□ -1.15
CEACAM1-207ENST00000403444 AK9Q5TCS8 1911 aa7.87□□□□□ -1.15
CEACAM1-207ENST00000403444 LRP5O75197 1615 aa7.86□□□□□ -1.15
CEACAM1-207ENST00000403444 FAM177BA6PVY3 158 aa7.86□□□□□ -1.15
CEACAM1-207ENST00000403444 FIBPO43427 364 aa7.86□□□□□ -1.15
CEACAM1-207ENST00000403444 INTS3Q68E01 1043 aaKnown RBP7.86□□□□□ -1.15
CEACAM1-207ENST00000403444 PLEKHM2Q8IWE5 1019 aa7.86□□□□□ -1.15
CEACAM1-207ENST00000403444 NUP98P52948 1817 aa7.86□□□□□ -1.15
CEACAM1-207ENST00000403444 SPG7Q9UQ90 795 aa7.86□□□□□ -1.15
CEACAM1-207ENST00000403444 LRRFIP2Q9Y608 721 aaKnown RBP7.86□□□□□ -1.15
CEACAM1-207ENST00000403444 KIAA1551Q9HCM1 1747 aa7.86□□□□□ -1.15
CEACAM1-207ENST00000403444 FSD2A1L4K1 749 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 CHL1O00533 1208 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 DYNC1I1O14576 645 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 BAG4O95429 457 aaKnown RBP7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 LMOD3Q0VAK6 560 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 CWC27Q6UX04 472 aaKnown RBP7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 FERMT3Q86UX7 667 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 GCC1Q96CN9 775 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 GEMIN8Q9NWZ8 242 aaKnown RBP7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 SOS1Q07889 1333 aaPredicted RBP7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 VPS37CA5D8V6 355 aaPredicted RBP7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 HSPA1LP34931 641 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 SLC20A2Q08357 652 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 VPS72Q15906 364 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 BMP2KLQ5H9B9 411 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 EGFL6Q8IUX8 553 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 IFT57Q9NWB7 429 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 KIF13BQ9NQT8 1826 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 DLEC1Q9Y238 1755 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 HMMRO75330 724 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 TNNT3P45378 269 aaPredicted RBP7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 ARAP2Q8WZ64 1704 aa7.85□□□□□ -1.15
CEACAM1-207ENST00000403444 ZNF646O15015 1829 aaPredicted RBP7.84□□□□□ -1.15
CEACAM1-207ENST00000403444 STK3Q13188 491 aa7.84□□□□□ -1.15
CEACAM1-207ENST00000403444 PSMD1Q99460 953 aa7.84□□□□□ -1.15
CEACAM1-207ENST00000403444 LRP10Q7Z4F1 713 aa7.84□□□□□ -1.15
CEACAM1-207ENST00000403444 IL17REQ8NFR9 667 aa7.84□□□□□ -1.15
CEACAM1-207ENST00000403444 PHAXQ9H814 394 aaKnown RBP7.84□□□□□ -1.15
CEACAM1-207ENST00000403444 PNMA6EA0A0J9YXQ4 647 aa7.84□□□□□ -1.16
CEACAM1-207ENST00000403444 CT47B1P0C2W7 299 aaPredicted RBP7.84□□□□□ -1.16
CEACAM1-207ENST00000403444 AKAP4Q5JQC9 854 aa7.84□□□□□ -1.16
CEACAM1-207ENST00000403444 HDGFL1Q5TGJ6 251 aa7.84□□□□□ -1.16
CEACAM1-207ENST00000403444 CYP27B1O15528 508 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 PHKG2P15735 406 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 PRIM1P49642 420 aaKnown RBP7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 CEBPZQ03701 1054 aaKnown RBP7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 TTC22Q5TAA0 569 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 MPRIPQ6WCQ1 1025 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 PALD1Q9ULE6 856 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 NSFL1CQ9UNZ2 370 aaKnown RBP7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 SRGAP3O43295 1099 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 UBTFL1P0CB47 393 aaPredicted RBP7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 AMOTQ4VCS5 1084 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 CEP85Q6P2H3 762 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 C17orf53Q8N3J3 647 aaPredicted RBP7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 TSC1Q92574 1164 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 NDUFB9Q9Y6M9 179 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 MYH3P11055 1940 aa7.83□□□□□ -1.16
CEACAM1-207ENST00000403444 UBAP1LF5GYI3 381 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 REC8O95072 547 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 LARP1Q6PKG0 1096 aaKnown RBP7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 SPC24Q8NBT2 197 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 LRRC37AA6NMS7 1700 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 SPDYE4A6NLX3 237 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 MYL6BP14649 208 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 TMEM132AQ24JP5 1023 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 ALDH1L2Q3SY69 923 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 ZSCAN30Q86W11 494 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 UNC5CLQ8IV45 518 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 PA2G4Q9UQ80 394 aaKnown RBP7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 KAT6BQ8WYB5 2073 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 IRF6O14896 467 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 ERC2O15083 957 aa7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 CCDC85AQ96PX6 553 aaPredicted RBP7.82□□□□□ -1.16
CEACAM1-207ENST00000403444 YY1AP1Q9H869 796 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms