RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 CWF19L2Q2TBE0 894 aaKnown RBP21.88■■□□□ 1.09
PTCHD3P3-201ENST00000403073 SLC4A10Q6U841 1118 aa21.87■■□□□ 1.09
PTCHD3P3-201ENST00000403073 CCDC191Q8NCU4 936 aa21.87■■□□□ 1.09
PTCHD3P3-201ENST00000403073 IBTKQ9P2D0 1353 aaPredicted RBP21.87■■□□□ 1.09
PTCHD3P3-201ENST00000403073 NRXN2Q9P2S2 1712 aa21.86■■□□□ 1.09
PTCHD3P3-201ENST00000403073 NEURL1BA8MQ27 555 aa21.86■■□□□ 1.09
PTCHD3P3-201ENST00000403073 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
PTCHD3P3-201ENST00000403073 C2CD5Q86YS7 1000 aa21.86■■□□□ 1.09
PTCHD3P3-201ENST00000403073 JARID2Q92833 1246 aaPredicted RBP21.86■■□□□ 1.09
PTCHD3P3-201ENST00000403073 FAM89AQ96GI7 184 aa21.86■■□□□ 1.09
PTCHD3P3-201ENST00000403073 CWC25Q9NXE8 425 aaPredicted RBP21.86■■□□□ 1.09
PTCHD3P3-201ENST00000403073 WWC3Q9ULE0 1092 aa21.86■■□□□ 1.09
PTCHD3P3-201ENST00000403073 ABCC12Q96J65 1359 aa21.86■■□□□ 1.09
PTCHD3P3-201ENST00000403073 PXDNLA1KZ92 1463 aa21.85■■□□□ 1.09
PTCHD3P3-201ENST00000403073 KCNA3P22001 575 aa21.85■■□□□ 1.09
PTCHD3P3-201ENST00000403073 PDE6BP35913 854 aa21.85■■□□□ 1.09
PTCHD3P3-201ENST00000403073 BEND3Q5T5X7 828 aa21.85■■□□□ 1.09
PTCHD3P3-201ENST00000403073 LINS1Q8NG48 757 aa21.85■■□□□ 1.09
PTCHD3P3-201ENST00000403073 ARFGEF2Q9Y6D5 1785 aa21.84■■□□□ 1.09
PTCHD3P3-201ENST00000403073 SH3TC1Q8TE82 1336 aa21.84■■□□□ 1.09
PTCHD3P3-201ENST00000403073 H0YIN7 160 aa21.84■■□□□ 1.09
PTCHD3P3-201ENST00000403073 SLC10A5Q5PT55 438 aa21.84■■□□□ 1.09
PTCHD3P3-201ENST00000403073 AFDNP55196 1824 aaKnown RBP21.84■■□□□ 1.09
PTCHD3P3-201ENST00000403073 HCLS1P14317 486 aaPredicted RBP21.83■■□□□ 1.09
PTCHD3P3-201ENST00000403073 ZBTB38Q8NAP3 1195 aaPredicted RBP21.83■■□□□ 1.09
PTCHD3P3-201ENST00000403073 FRAT1Q92837 279 aaPredicted RBP21.83■■□□□ 1.09
PTCHD3P3-201ENST00000403073 RNF123Q5XPI4 1314 aa21.82■■□□□ 1.08
PTCHD3P3-201ENST00000403073 GCKRQ14397 625 aa21.82■■□□□ 1.08
PTCHD3P3-201ENST00000403073 C3orf67Q6ZVT6 689 aa21.82■■□□□ 1.08
PTCHD3P3-201ENST00000403073 KLRG2A4D1S0 409 aaPredicted RBP21.81■■□□□ 1.08
PTCHD3P3-201ENST00000403073 PELP1Q8IZL8 1130 aaKnown RBP21.81■■□□□ 1.08
PTCHD3P3-201ENST00000403073 API5Q9BZZ5 524 aaKnown RBP21.81■■□□□ 1.08
PTCHD3P3-201ENST00000403073 KIF16BQ96L93 1317 aa21.8■■□□□ 1.08
PTCHD3P3-201ENST00000403073 IRS4O14654 1257 aaPredicted RBP21.8■■□□□ 1.08
PTCHD3P3-201ENST00000403073 PCCAP05165 728 aaPredicted RBP21.8■■□□□ 1.08
PTCHD3P3-201ENST00000403073 ARHGAP45Q92619 1136 aa21.8■■□□□ 1.08
PTCHD3P3-201ENST00000403073 ZNF622Q969S3 477 aaKnown RBP eCLIP21.8■■□□□ 1.08
PTCHD3P3-201ENST00000403073 NLRP3Q96P20 1036 aa21.8■■□□□ 1.08
PTCHD3P3-201ENST00000403073 SRCIN1Q9C0H9 1055 aa21.8■■□□□ 1.08
PTCHD3P3-201ENST00000403073 PIM2Q9P1W9 311 aa21.8■■□□□ 1.08
PTCHD3P3-201ENST00000403073 RCAN3Q9UKA8 241 aa21.8■■□□□ 1.08
PTCHD3P3-201ENST00000403073 ANKRD36CQ5JPF3 1778 aa21.79■■□□□ 1.08
PTCHD3P3-201ENST00000403073 H7C1W4 665 aa21.79■■□□□ 1.08
PTCHD3P3-201ENST00000403073 IPO8O15397 1037 aaKnown RBP21.79■■□□□ 1.08
PTCHD3P3-201ENST00000403073 SRGNP10124 158 aa21.79■■□□□ 1.08
PTCHD3P3-201ENST00000403073 PDZRN3Q9UPQ7 1066 aa21.79■■□□□ 1.08
PTCHD3P3-201ENST00000403073 TNNQ9UQP3 1299 aa21.79■■□□□ 1.08
PTCHD3P3-201ENST00000403073 ALDH1L1O75891 902 aa21.78■■□□□ 1.08
PTCHD3P3-201ENST00000403073 KIF13BQ9NQT8 1826 aa21.78■■□□□ 1.08
PTCHD3P3-201ENST00000403073 GPR162Q16538 588 aa21.77■■□□□ 1.08
PTCHD3P3-201ENST00000403073 UBE3BQ7Z3V4 1068 aa21.77■■□□□ 1.08
PTCHD3P3-201ENST00000403073 MASTLQ96GX5 879 aa21.77■■□□□ 1.08
PTCHD3P3-201ENST00000403073 CACNA1FO60840 1977 aa21.76■■□□□ 1.07
PTCHD3P3-201ENST00000403073 TRIM27P14373 513 aa21.76■■□□□ 1.07
PTCHD3P3-201ENST00000403073 NPR1P16066 1061 aa21.76■■□□□ 1.07
PTCHD3P3-201ENST00000403073 YBX3P16989 372 aaKnown RBP eCLIP21.76■■□□□ 1.07
PTCHD3P3-201ENST00000403073 CRY2Q49AN0 593 aa21.76■■□□□ 1.07
PTCHD3P3-201ENST00000403073 ZKSCAN2Q63HK3 967 aa21.76■■□□□ 1.07
PTCHD3P3-201ENST00000403073 STYK1Q6J9G0 422 aa21.76■■□□□ 1.07
PTCHD3P3-201ENST00000403073 ATF7IPQ6VMQ6 1270 aa21.76■■□□□ 1.07
PTCHD3P3-201ENST00000403073 BCS1LQ9Y276 419 aa21.76■■□□□ 1.07
PTCHD3P3-201ENST00000403073 KIAA1551Q9HCM1 1747 aa21.75■■□□□ 1.07
PTCHD3P3-201ENST00000403073 RIC1Q4ADV7 1423 aa21.75■■□□□ 1.07
PTCHD3P3-201ENST00000403073 CASP7P55210 303 aa21.75■■□□□ 1.07
PTCHD3P3-201ENST00000403073 DALRD3Q5D0E6 543 aaKnown RBP21.75■■□□□ 1.07
PTCHD3P3-201ENST00000403073 CLUAP1Q96AJ1 413 aa21.75■■□□□ 1.07
PTCHD3P3-201ENST00000403073 CDHR2Q9BYE9 1310 aa21.75■■□□□ 1.07
PTCHD3P3-201ENST00000403073 ANKRD31Q8N7Z5 1873 aa21.75■■□□□ 1.07
PTCHD3P3-201ENST00000403073 TTLL6Q8N841 843 aa21.74■■□□□ 1.07
PTCHD3P3-201ENST00000403073 RPGRQ92834 1020 aaKnown RBP21.74■■□□□ 1.07
PTCHD3P3-201ENST00000403073 C9orf78Q9NZ63 289 aaPredicted RBP21.74■■□□□ 1.07
PTCHD3P3-201ENST00000403073 N4BP2Q86UW6 1770 aaPredicted RBP21.74■■□□□ 1.07
PTCHD3P3-201ENST00000403073 GRM8O00222 908 aa21.73■■□□□ 1.07
PTCHD3P3-201ENST00000403073 PDE8AO60658 829 aa21.73■■□□□ 1.07
PTCHD3P3-201ENST00000403073 CCT4P50991 539 aaKnown RBP21.73■■□□□ 1.07
PTCHD3P3-201ENST00000403073 CNKSR1Q969H4 720 aa21.73■■□□□ 1.07
PTCHD3P3-201ENST00000403073 TNRC6CQ9HCJ0 1690 aaKnown RBP21.72■■□□□ 1.07
PTCHD3P3-201ENST00000403073 DCAF8L1A6NGE4 600 aa21.72■■□□□ 1.07
PTCHD3P3-201ENST00000403073 HSP90B1P14625 803 aaKnown RBP21.72■■□□□ 1.07
PTCHD3P3-201ENST00000403073 HOXA10P31260 410 aaPredicted RBP21.72■■□□□ 1.07
PTCHD3P3-201ENST00000403073 SF3B3Q15393 1217 aaKnown RBP21.72■■□□□ 1.07
PTCHD3P3-201ENST00000403073 RBM17Q96I25 401 aaKnown RBP21.72■■□□□ 1.07
PTCHD3P3-201ENST00000403073 ABCC4O15439 1325 aa21.72■■□□□ 1.07
PTCHD3P3-201ENST00000403073 NBPF7P0C2Y1 421 aaPredicted RBP21.71■■□□□ 1.07
PTCHD3P3-201ENST00000403073 INTS3Q68E01 1043 aaKnown RBP21.71■■□□□ 1.07
PTCHD3P3-201ENST00000403073 CCDC85AQ96PX6 553 aaPredicted RBP21.71■■□□□ 1.07
PTCHD3P3-201ENST00000403073 ZNF219Q9P2Y4 722 aaPredicted RBP21.71■■□□□ 1.07
PTCHD3P3-201ENST00000403073 PLIN1O60240 522 aa21.7■■□□□ 1.06
PTCHD3P3-201ENST00000403073 ALDH1B1P30837 517 aa21.7■■□□□ 1.06
PTCHD3P3-201ENST00000403073 PRPF40BQ6NWY9 871 aaKnown RBP21.7■■□□□ 1.06
PTCHD3P3-201ENST00000403073 CRAMP1Q96RY5 1269 aa21.7■■□□□ 1.06
PTCHD3P3-201ENST00000403073 USP44Q9H0E7 712 aa21.7■■□□□ 1.06
PTCHD3P3-201ENST00000403073 C21orf2O43822 256 aa21.68■■□□□ 1.06
PTCHD3P3-201ENST00000403073 CTSWP56202 376 aa21.68■■□□□ 1.06
PTCHD3P3-201ENST00000403073 DDX46Q7L014 1031 aaKnown RBP21.68■■□□□ 1.06
PTCHD3P3-201ENST00000403073 DZIP1LQ8IYY4 767 aaKnown RBP21.68■■□□□ 1.06
PTCHD3P3-201ENST00000403073 TMEM57Q8N5G2 664 aa21.68■■□□□ 1.06
PTCHD3P3-201ENST00000403073 TTLL11Q8NHH1 800 aa21.68■■□□□ 1.06
PTCHD3P3-201ENST00000403073 PLA2G12BQ9BX93 195 aa21.68■■□□□ 1.06
PTCHD3P3-201ENST00000403073 UTYO14607 1347 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms