RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 UNC5CLQ8IV45 518 aa11.26□□□□□ -0.61
CBX1-203ENST00000402583 TAOK2Q9UL54 1235 aa11.26□□□□□ -0.61
CBX1-203ENST00000402583 RAD50Q92878 1312 aa11.26□□□□□ -0.61
CBX1-203ENST00000402583 BAG4O95429 457 aaKnown RBP11.25□□□□□ -0.61
CBX1-203ENST00000402583 IL2RBP14784 551 aa11.25□□□□□ -0.61
CBX1-203ENST00000402583 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
CBX1-203ENST00000402583 PLBD2Q8NHP8 589 aa11.25□□□□□ -0.61
CBX1-203ENST00000402583 CARD10Q9BWT7 1032 aa11.25□□□□□ -0.61
CBX1-203ENST00000402583 C5P01031 1676 aa11.24□□□□□ -0.61
CBX1-203ENST00000402583 MAP4K4O95819 1239 aaPredicted RBP11.24□□□□□ -0.61
CBX1-203ENST00000402583 CYP2E1P05181 493 aaPredicted RBP11.24□□□□□ -0.61
CBX1-203ENST00000402583 MRE11P49959 708 aa11.24□□□□□ -0.61
CBX1-203ENST00000402583 EVA1CP58658 441 aa11.24□□□□□ -0.61
CBX1-203ENST00000402583 CUL4AQ13619 759 aa11.24□□□□□ -0.61
CBX1-203ENST00000402583 TMX3Q96JJ7 454 aa11.24□□□□□ -0.61
CBX1-203ENST00000402583 COPRSQ9NQ92 184 aa11.24□□□□□ -0.61
CBX1-203ENST00000402583 USP16Q9Y5T5 823 aa11.24□□□□□ -0.61
CBX1-203ENST00000402583 COL5A2P05997 1499 aaPredicted RBP11.24□□□□□ -0.61
CBX1-203ENST00000402583 FSD2A1L4K1 749 aa11.23□□□□□ -0.61
CBX1-203ENST00000402583 CD44P16070 742 aaKnown RBP11.23□□□□□ -0.61
CBX1-203ENST00000402583 CWC27Q6UX04 472 aaKnown RBP11.23□□□□□ -0.61
CBX1-203ENST00000402583 LRP10Q7Z4F1 713 aa11.23□□□□□ -0.61
CBX1-203ENST00000402583 KAZALD1Q96I82 304 aa11.23□□□□□ -0.61
CBX1-203ENST00000402583 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
CBX1-203ENST00000402583 GZF1Q9H116 711 aaPredicted RBP11.23□□□□□ -0.61
CBX1-203ENST00000402583 PALD1Q9ULE6 856 aa11.23□□□□□ -0.61
CBX1-203ENST00000402583 PA2G4Q9UQ80 394 aaKnown RBP11.23□□□□□ -0.61
CBX1-203ENST00000402583 LAMB4A4D0S4 1761 aa11.23□□□□□ -0.61
CBX1-203ENST00000402583 SASH1O94885 1247 aa11.22□□□□□ -0.61
CBX1-203ENST00000402583 KLHL40Q2TBA0 621 aa11.22□□□□□ -0.61
CBX1-203ENST00000402583 RABL6Q3YEC7 729 aaPredicted RBP11.22□□□□□ -0.61
CBX1-203ENST00000402583 A0A087WZG4 1122 aa11.21□□□□□ -0.61
CBX1-203ENST00000402583 ZKSCAN1P17029 563 aaPredicted RBP11.21□□□□□ -0.61
CBX1-203ENST00000402583 EAF2Q96CJ1 260 aaPredicted RBP11.21□□□□□ -0.61
CBX1-203ENST00000402583 TEX13AQ9BXU3 409 aaPredicted RBP11.21□□□□□ -0.61
CBX1-203ENST00000402583 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.61
CBX1-203ENST00000402583 DDX49Q9Y6V7 483 aaKnown RBP11.21□□□□□ -0.61
CBX1-203ENST00000402583 XIRP1Q702N8 1843 aaKnown RBP11.21□□□□□ -0.62
CBX1-203ENST00000402583 RFX7Q2KHR2 1363 aa11.2□□□□□ -0.62
CBX1-203ENST00000402583 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
CBX1-203ENST00000402583 RNF20Q5VTR2 975 aa11.2□□□□□ -0.62
CBX1-203ENST00000402583 MCTP1Q6DN14 999 aa11.2□□□□□ -0.62
CBX1-203ENST00000402583 TICAM2Q86XR7 235 aa11.2□□□□□ -0.62
CBX1-203ENST00000402583 ZGPATQ8N5A5 531 aaKnown RBP11.2□□□□□ -0.62
CBX1-203ENST00000402583 TM6SF1Q9BZW5 370 aa11.2□□□□□ -0.62
CBX1-203ENST00000402583 SIL1Q9H173 461 aa11.2□□□□□ -0.62
CBX1-203ENST00000402583 CWC25Q9NXE8 425 aaPredicted RBP11.2□□□□□ -0.62
CBX1-203ENST00000402583 BRPF3Q9ULD4 1205 aa11.2□□□□□ -0.62
CBX1-203ENST00000402583 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.2□□□□□ -0.62
CBX1-203ENST00000402583 ZNF335Q9H4Z2 1342 aaPredicted RBP11.19□□□□□ -0.62
CBX1-203ENST00000402583 H7C1W4 665 aa11.19□□□□□ -0.62
CBX1-203ENST00000402583 ATP5JP18859 108 aa11.19□□□□□ -0.62
CBX1-203ENST00000402583 PSMA5P28066 241 aa11.19□□□□□ -0.62
CBX1-203ENST00000402583 KCNJ4P48050 445 aa11.19□□□□□ -0.62
CBX1-203ENST00000402583 UBE3BQ7Z3V4 1068 aa11.19□□□□□ -0.62
CBX1-203ENST00000402583 ZNF467Q7Z7K2 595 aaPredicted RBP11.19□□□□□ -0.62
CBX1-203ENST00000402583 CCDC191Q8NCU4 936 aa11.19□□□□□ -0.62
CBX1-203ENST00000402583 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
CBX1-203ENST00000402583 KCNB2Q92953 911 aa11.19□□□□□ -0.62
CBX1-203ENST00000402583 ZSCAN31Q96LW9 406 aaPredicted RBP11.19□□□□□ -0.62
CBX1-203ENST00000402583 FSD1Q9BTV5 496 aa11.19□□□□□ -0.62
CBX1-203ENST00000402583 UPF3BQ9BZI7 483 aaKnown RBP11.19□□□□□ -0.62
CBX1-203ENST00000402583 CCDC8Q9H0W5 538 aaPredicted RBP11.19□□□□□ -0.62
CBX1-203ENST00000402583 SNRKQ9NRH2 765 aa11.19□□□□□ -0.62
CBX1-203ENST00000402583 LIMCH1Q9UPQ0 1083 aa11.19□□□□□ -0.62
CBX1-203ENST00000402583 TNS2Q63HR2 1409 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 CCDC171Q6TFL3 1326 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 WDR33Q9C0J8 1336 aaKnown RBP11.18□□□□□ -0.62
CBX1-203ENST00000402583 BRD1O95696 1058 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 MBD3O95983 291 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 PDIA4P13667 645 aaKnown RBP11.18□□□□□ -0.62
CBX1-203ENST00000402583 RFX5P48382 616 aaPredicted RBP11.18□□□□□ -0.62
CBX1-203ENST00000402583 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
CBX1-203ENST00000402583 TNNI3KQ59H18 835 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 VPS53Q5VIR6 699 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
CBX1-203ENST00000402583 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 GRPEL1Q9HAV7 217 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 STRN4Q9NRL3 753 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 TMOD3Q9NYL9 352 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 CYP46A1Q9Y6A2 500 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 FPGT-TNNI3KV9GXZ4 949 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 KCPQ6ZWJ8 1503 aa11.18□□□□□ -0.62
CBX1-203ENST00000402583 PAPPAQ13219 1627 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 GLI3P10071 1580 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 NBPF26B4DH59 902 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 ATP5J2-PTCD1G3V325 749 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 PTCD1O75127 700 aaKnown RBP11.17□□□□□ -0.62
CBX1-203ENST00000402583 XRCC6P12956 609 aaKnown RBP eCLIP11.17□□□□□ -0.62
CBX1-203ENST00000402583 CASP7P55210 303 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 NMIQ13287 307 aaPredicted RBP11.17□□□□□ -0.62
CBX1-203ENST00000402583 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 NBPF14Q5TI25 921 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 NBPF10Q6P3W6 841 aaKnown RBP11.17□□□□□ -0.62
CBX1-203ENST00000402583 HS6ST3Q8IZP7 471 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 NBPF15Q8N660 670 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 TTC14Q96N46 770 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 IL25Q9H293 177 aa11.17□□□□□ -0.62
CBX1-203ENST00000402583 GPR108Q9NPR9 543 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms