RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 GPT2Q8TD30 523 aa10.53□□□□□ -0.72
LINC01139-201ENST00000400946 ALDH8A1Q9H2A2 487 aaPredicted RBP10.53□□□□□ -0.72
LINC01139-201ENST00000400946 PHLPP1O60346 1717 aa10.52□□□□□ -0.72
LINC01139-201ENST00000400946 MRC1P22897 1456 aa10.52□□□□□ -0.72
LINC01139-201ENST00000400946 RFX7Q2KHR2 1363 aa10.52□□□□□ -0.73
LINC01139-201ENST00000400946 EIF2S2P20042 333 aaKnown RBP10.52□□□□□ -0.73
LINC01139-201ENST00000400946 UNC5CLQ8IV45 518 aa10.52□□□□□ -0.73
LINC01139-201ENST00000400946 NECTIN2Q92692 538 aa10.52□□□□□ -0.73
LINC01139-201ENST00000400946 FAM163AQ96GL9 167 aaPredicted RBP10.52□□□□□ -0.73
LINC01139-201ENST00000400946 ANO8Q9HCE9 1232 aaPredicted RBP10.52□□□□□ -0.73
LINC01139-201ENST00000400946 IL1RAPL2Q9NP60 686 aa10.52□□□□□ -0.73
LINC01139-201ENST00000400946 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
LINC01139-201ENST00000400946 C9orf78Q9NZ63 289 aaPredicted RBP10.52□□□□□ -0.73
LINC01139-201ENST00000400946 SNX14Q9Y5W7 946 aa10.52□□□□□ -0.73
LINC01139-201ENST00000400946 AHDC1Q5TGY3 1603 aaPredicted RBP10.52□□□□□ -0.73
LINC01139-201ENST00000400946 C1orf167Q5SNV9 1468 aa10.52□□□□□ -0.73
LINC01139-201ENST00000400946 ALS2Q96Q42 1657 aa10.51□□□□□ -0.73
LINC01139-201ENST00000400946 GRM8O00222 908 aa10.51□□□□□ -0.73
LINC01139-201ENST00000400946 TPM2P07951 284 aa10.51□□□□□ -0.73
LINC01139-201ENST00000400946 LARP1Q6PKG0 1096 aaKnown RBP10.51□□□□□ -0.73
LINC01139-201ENST00000400946 NUTM1Q86Y26 1132 aa10.51□□□□□ -0.73
LINC01139-201ENST00000400946 COL16A1Q07092 1604 aaPredicted RBP10.51□□□□□ -0.73
LINC01139-201ENST00000400946 ZNF500O60304 480 aaPredicted RBP10.5□□□□□ -0.73
LINC01139-201ENST00000400946 IFIT2P09913 472 aaKnown RBP10.5□□□□□ -0.73
LINC01139-201ENST00000400946 MSNP26038 577 aaKnown RBP10.5□□□□□ -0.73
LINC01139-201ENST00000400946 PSMA5P28066 241 aa10.5□□□□□ -0.73
LINC01139-201ENST00000400946 PRIM1P49642 420 aaKnown RBP10.5□□□□□ -0.73
LINC01139-201ENST00000400946 OS9Q13438 667 aaPredicted RBP10.5□□□□□ -0.73
LINC01139-201ENST00000400946 LCE2DQ5TA82 110 aaPredicted RBP10.5□□□□□ -0.73
LINC01139-201ENST00000400946 USHBP1Q8N6Y0 703 aa10.5□□□□□ -0.73
LINC01139-201ENST00000400946 ANKRD24Q8TF21 1146 aa10.5□□□□□ -0.73
LINC01139-201ENST00000400946 RBSNQ9H1K0 784 aa10.5□□□□□ -0.73
LINC01139-201ENST00000400946 ZSWIM6Q9HCJ5 1215 aa10.5□□□□□ -0.73
LINC01139-201ENST00000400946 TMEM63CQ9P1W3 806 aa10.5□□□□□ -0.73
LINC01139-201ENST00000400946 NOL7Q9UMY1 257 aaKnown RBP10.5□□□□□ -0.73
LINC01139-201ENST00000400946 MAP3K2Q9Y2U5 619 aa10.5□□□□□ -0.73
LINC01139-201ENST00000400946 PXDNQ92626 1479 aa10.49□□□□□ -0.73
LINC01139-201ENST00000400946 ZSCAN22P10073 491 aaPredicted RBP10.49□□□□□ -0.73
LINC01139-201ENST00000400946 ZKSCAN1P17029 563 aaPredicted RBP10.49□□□□□ -0.73
LINC01139-201ENST00000400946 ANKRD1Q15327 319 aa10.49□□□□□ -0.73
LINC01139-201ENST00000400946 TSHZ3Q63HK5 1081 aa10.49□□□□□ -0.73
LINC01139-201ENST00000400946 CCDC39Q9UFE4 941 aa10.49□□□□□ -0.73
LINC01139-201ENST00000400946 NHSL1Q5SYE7 1610 aa10.49□□□□□ -0.73
LINC01139-201ENST00000400946 RPAP1Q9BWH6 1393 aaPredicted RBP10.49□□□□□ -0.73
LINC01139-201ENST00000400946 NEXNQ0ZGT2 675 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 G3BP1Q13283 466 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC01139-201ENST00000400946 NECTIN1Q15223 517 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 TSGA10IPQ3SY00 556 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 RNF20Q5VTR2 975 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 MPRIPQ6WCQ1 1025 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.48□□□□□ -0.73
LINC01139-201ENST00000400946 ORAI2Q96SN7 254 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 TSPY26PQ9H489 355 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 HMG20BQ9P0W2 317 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 CYP46A1Q9Y6A2 500 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 JCADQ9P266 1359 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 KCNQ3O43525 872 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 OFD1O75665 1012 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 PDCP20941 246 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 AK2P54819 239 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 UBE2HP62256 183 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 MAMSTRQ6ZN01 415 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 MAP4K1Q92918 833 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 UPF3BQ9BZI7 483 aaKnown RBP10.48□□□□□ -0.73
LINC01139-201ENST00000400946 SPG7Q9UQ90 795 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 SMC3Q9UQE7 1217 aa10.48□□□□□ -0.73
LINC01139-201ENST00000400946 ERBB3P21860 1342 aa10.47□□□□□ -0.73
LINC01139-201ENST00000400946 ERBB4Q15303 1308 aa10.47□□□□□ -0.73
LINC01139-201ENST00000400946 CCDC171Q6TFL3 1326 aa10.47□□□□□ -0.73
LINC01139-201ENST00000400946 PARP4Q9UKK3 1724 aaKnown RBP10.47□□□□□ -0.73
LINC01139-201ENST00000400946 PKD1L3Q7Z443 1732 aa10.47□□□□□ -0.73
LINC01139-201ENST00000400946 STX6O43752 255 aa10.47□□□□□ -0.73
LINC01139-201ENST00000400946 CCDC183Q5T5S1 534 aa10.47□□□□□ -0.73
LINC01139-201ENST00000400946 RUFY3Q7L099 469 aa10.47□□□□□ -0.73
LINC01139-201ENST00000400946 KRT28Q7Z3Y7 464 aa10.47□□□□□ -0.73
LINC01139-201ENST00000400946 DDX17Q92841 729 aaKnown RBP10.47□□□□□ -0.73
LINC01139-201ENST00000400946 COPRSQ9NQ92 184 aa10.47□□□□□ -0.73
LINC01139-201ENST00000400946 COL18A1P39060 1754 aa10.46□□□□□ -0.73
LINC01139-201ENST00000400946 F13A1P00488 732 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 KRT32Q14532 448 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 ZNF790Q6PG37 636 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 CWC27Q6UX04 472 aaKnown RBP10.46□□□□□ -0.74
LINC01139-201ENST00000400946 ILDR2Q71H61 639 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 RASEFQ8IZ41 740 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 RAPGEF4Q8WZA2 1011 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 LRRC59Q96AG4 307 aaKnown RBP10.46□□□□□ -0.74
LINC01139-201ENST00000400946 NAP1L5Q96NT1 182 aaPredicted RBP10.46□□□□□ -0.74
LINC01139-201ENST00000400946 METTL22Q9BUU2 404 aaPredicted RBP10.46□□□□□ -0.74
LINC01139-201ENST00000400946 IL25Q9H293 177 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 SLC52A2Q9HAB3 445 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 PDRG1Q9NUG6 133 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 NPHP3Q7Z494 1330 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 LAMB4A4D0S4 1761 aa10.46□□□□□ -0.74
LINC01139-201ENST00000400946 SYCE3A1L190 88 aa10.45□□□□□ -0.74
LINC01139-201ENST00000400946 TATP17735 454 aaPredicted RBP10.45□□□□□ -0.74
LINC01139-201ENST00000400946 SYT1P21579 422 aa10.45□□□□□ -0.74
LINC01139-201ENST00000400946 MNX1P50219 401 aaPredicted RBP10.45□□□□□ -0.74
LINC01139-201ENST00000400946 PDIA6Q15084 440 aa10.45□□□□□ -0.74
LINC01139-201ENST00000400946 USP48Q86UV5 1035 aa10.45□□□□□ -0.74
LINC01139-201ENST00000400946 AACSQ86V21 672 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms