RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 CNPY2Q9Y2B0 182 aa16.01■□□□□ 0.15
SIRPA-203ENST00000400068 IFIT5Q13325 482 aaKnown RBP16.01■□□□□ 0.15
SIRPA-203ENST00000400068 TMEM131LA2VDJ0 1609 aa16.01■□□□□ 0.15
SIRPA-203ENST00000400068 ESPNB1AK53 854 aa16.01■□□□□ 0.15
SIRPA-203ENST00000400068 PTCH1Q13635 1447 aa16.01■□□□□ 0.15
SIRPA-203ENST00000400068 HELBQ8NG08 1087 aaPredicted RBP16.01■□□□□ 0.15
SIRPA-203ENST00000400068 SSH3Q8TE77 659 aa16.01■□□□□ 0.15
SIRPA-203ENST00000400068 FAM89AQ96GI7 184 aa16.01■□□□□ 0.15
SIRPA-203ENST00000400068 DBNDD2Q9BQY9 259 aa16.01■□□□□ 0.15
SIRPA-203ENST00000400068 STX6O43752 255 aa16■□□□□ 0.15
SIRPA-203ENST00000400068 LDHAL6AQ6ZMR3 332 aa16■□□□□ 0.15
SIRPA-203ENST00000400068 PDCP20941 246 aa16■□□□□ 0.15
SIRPA-203ENST00000400068 PTPRUQ92729 1446 aa16■□□□□ 0.15
SIRPA-203ENST00000400068 GOLGA6L19H0YKK7 550 aa16■□□□□ 0.15
SIRPA-203ENST00000400068 TMEM94Q12767 1356 aa16■□□□□ 0.15
SIRPA-203ENST00000400068 KRT85P78386 507 aa15.99■□□□□ 0.15
SIRPA-203ENST00000400068 ZSCAN23Q3MJ62 389 aa15.99■□□□□ 0.15
SIRPA-203ENST00000400068 IQSEC3Q9UPP2 1182 aaPredicted RBP15.99■□□□□ 0.15
SIRPA-203ENST00000400068 FAM173BQ6P4H8 233 aa15.99■□□□□ 0.15
SIRPA-203ENST00000400068 CCDC82Q8N4S0 544 aa15.99■□□□□ 0.15
SIRPA-203ENST00000400068 EAF2Q96CJ1 260 aaPredicted RBP15.99■□□□□ 0.15
SIRPA-203ENST00000400068 ABCF2Q9UG63 623 aa15.99■□□□□ 0.15
SIRPA-203ENST00000400068 R3HCC1Q9Y3T6 440 aaKnown RBP15.99■□□□□ 0.15
SIRPA-203ENST00000400068 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
SIRPA-203ENST00000400068 KLHL40Q2TBA0 621 aa15.99■□□□□ 0.15
SIRPA-203ENST00000400068 SYNE3Q6ZMZ3 975 aa15.99■□□□□ 0.15
SIRPA-203ENST00000400068 IL2RBP14784 551 aa15.99■□□□□ 0.15
SIRPA-203ENST00000400068 SASS6Q6UVJ0 657 aa15.99■□□□□ 0.15
SIRPA-203ENST00000400068 MYO5BQ9ULV0 1848 aa15.98■□□□□ 0.15
SIRPA-203ENST00000400068 EXOC5O00471 708 aa15.98■□□□□ 0.15
SIRPA-203ENST00000400068 CPLX2Q6PUV4 134 aaKnown RBP15.98■□□□□ 0.15
SIRPA-203ENST00000400068 TTLL7Q6ZT98 887 aa15.98■□□□□ 0.15
SIRPA-203ENST00000400068 BRF1Q92994 677 aa15.98■□□□□ 0.15
SIRPA-203ENST00000400068 SPATA32Q96LK8 384 aa15.98■□□□□ 0.15
SIRPA-203ENST00000400068 SDF4Q9BRK5 362 aa15.98■□□□□ 0.15
SIRPA-203ENST00000400068 TLR7Q9NYK1 1049 aaKnown RBP15.98■□□□□ 0.15
SIRPA-203ENST00000400068 PHKG2P15735 406 aa15.98■□□□□ 0.15
SIRPA-203ENST00000400068 GCKRQ14397 625 aa15.98■□□□□ 0.15
SIRPA-203ENST00000400068 BTG4Q9NY30 223 aa15.98■□□□□ 0.15
SIRPA-203ENST00000400068 CHAF1AQ13111 956 aaPredicted RBP15.98■□□□□ 0.15
SIRPA-203ENST00000400068 CKAP2LQ8IYA6 745 aa15.98■□□□□ 0.15
SIRPA-203ENST00000400068 MED14O60244 1454 aa15.97■□□□□ 0.15
SIRPA-203ENST00000400068 SGSM2O43147 1006 aa15.97■□□□□ 0.15
SIRPA-203ENST00000400068 CCDC73Q6ZRK6 1079 aa15.97■□□□□ 0.15
SIRPA-203ENST00000400068 ZSCAN31Q96LW9 406 aaPredicted RBP15.97■□□□□ 0.15
SIRPA-203ENST00000400068 SNX14Q9Y5W7 946 aa15.97■□□□□ 0.15
SIRPA-203ENST00000400068 MAP2P11137 1827 aaKnown RBP15.97■□□□□ 0.15
SIRPA-203ENST00000400068 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
SIRPA-203ENST00000400068 PTH1RQ03431 593 aa15.97■□□□□ 0.15
SIRPA-203ENST00000400068 ANKRD1Q15327 319 aa15.97■□□□□ 0.15
SIRPA-203ENST00000400068 CCDC173Q0VFZ6 552 aa15.97■□□□□ 0.15
SIRPA-203ENST00000400068 USP48Q86UV5 1035 aa15.97■□□□□ 0.15
SIRPA-203ENST00000400068 METTL22Q9BUU2 404 aaPredicted RBP15.97■□□□□ 0.15
SIRPA-203ENST00000400068 ME1P48163 572 aa15.96■□□□□ 0.15
SIRPA-203ENST00000400068 SIGLEC1Q9BZZ2 1709 aa15.96■□□□□ 0.15
SIRPA-203ENST00000400068 IBTKQ9P2D0 1353 aaPredicted RBP15.96■□□□□ 0.15
SIRPA-203ENST00000400068 DNM1Q05193 864 aaKnown RBP15.96■□□□□ 0.15
SIRPA-203ENST00000400068 CREB3L3Q68CJ9 461 aa15.96■□□□□ 0.15
SIRPA-203ENST00000400068 DIP2BQ9P265 1576 aa15.96■□□□□ 0.15
SIRPA-203ENST00000400068 TRIM29Q14134 588 aa15.96■□□□□ 0.15
SIRPA-203ENST00000400068 GOLGA6L6A8MZA4 724 aa15.95■□□□□ 0.14
SIRPA-203ENST00000400068 CCDC144CPQ8IYA2 1237 aa15.95■□□□□ 0.14
SIRPA-203ENST00000400068 NEURL1BA8MQ27 555 aa15.95■□□□□ 0.14
SIRPA-203ENST00000400068 RASEFQ8IZ41 740 aa15.95■□□□□ 0.14
SIRPA-203ENST00000400068 AKAP17AQ02040 695 aaKnown RBP15.95■□□□□ 0.14
SIRPA-203ENST00000400068 GIMAP6Q6P9H5 292 aa15.95■□□□□ 0.14
SIRPA-203ENST00000400068 PIBF1Q8WXW3 757 aa15.95■□□□□ 0.14
SIRPA-203ENST00000400068 NEK1Q96PY6 1258 aa15.95■□□□□ 0.14
SIRPA-203ENST00000400068 BABAM1Q9NWV8 329 aa15.95■□□□□ 0.14
SIRPA-203ENST00000400068 ERBB3P21860 1342 aa15.95■□□□□ 0.14
SIRPA-203ENST00000400068 HOXB7P09629 217 aa15.95■□□□□ 0.14
SIRPA-203ENST00000400068 SEC62Q99442 399 aaKnown RBP15.95■□□□□ 0.14
SIRPA-203ENST00000400068 TNNT3P45378 269 aaPredicted RBP15.94■□□□□ 0.14
SIRPA-203ENST00000400068 ANAPC15P60006 121 aa15.94■□□□□ 0.14
SIRPA-203ENST00000400068 ZNF592Q92610 1267 aa15.94■□□□□ 0.14
SIRPA-203ENST00000400068 TNMDQ9H2S6 317 aa15.94■□□□□ 0.14
SIRPA-203ENST00000400068 USP25Q9UHP3 1055 aa15.94■□□□□ 0.14
SIRPA-203ENST00000400068 VGLL3A8MV65 326 aa15.94■□□□□ 0.14
SIRPA-203ENST00000400068 DNAJC10Q8IXB1 793 aa15.94■□□□□ 0.14
SIRPA-203ENST00000400068 TTC41PQ6P2S7 1318 aa15.94■□□□□ 0.14
SIRPA-203ENST00000400068 RASSF8Q8NHQ8 419 aa15.94■□□□□ 0.14
SIRPA-203ENST00000400068 TRIM5Q9C035 493 aa15.94■□□□□ 0.14
SIRPA-203ENST00000400068 FAM13BQ9NYF5 915 aa15.94■□□□□ 0.14
SIRPA-203ENST00000400068 NUP133Q8WUM0 1156 aa15.93■□□□□ 0.14
SIRPA-203ENST00000400068 SLAIN2Q9P270 581 aa15.93■□□□□ 0.14
SIRPA-203ENST00000400068 NPHP4O75161 1426 aaPredicted RBP15.93■□□□□ 0.14
SIRPA-203ENST00000400068 RAD21O60216 631 aa15.93■□□□□ 0.14
SIRPA-203ENST00000400068 KRT32Q14532 448 aa15.93■□□□□ 0.14
SIRPA-203ENST00000400068 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.93■□□□□ 0.14
SIRPA-203ENST00000400068 KIF24Q5T7B8 1368 aa15.93■□□□□ 0.14
SIRPA-203ENST00000400068 COL3A1P02461 1466 aaPredicted RBP15.93■□□□□ 0.14
SIRPA-203ENST00000400068 CCDC171Q6TFL3 1326 aa15.93■□□□□ 0.14
SIRPA-203ENST00000400068 ZSCAN22P10073 491 aaPredicted RBP15.93■□□□□ 0.14
SIRPA-203ENST00000400068 HCLS1P14317 486 aaPredicted RBP15.93■□□□□ 0.14
SIRPA-203ENST00000400068 SYT1P21579 422 aa15.93■□□□□ 0.14
SIRPA-203ENST00000400068 MEX3CQ5U5Q3 659 aaKnown RBP15.93■□□□□ 0.14
SIRPA-203ENST00000400068 LRP2BPQ9P2M1 347 aa15.93■□□□□ 0.14
SIRPA-203ENST00000400068 STK38Q15208 465 aa15.92■□□□□ 0.14
SIRPA-203ENST00000400068 SLC4A8Q2Y0W8 1093 aa15.92■□□□□ 0.14
SIRPA-203ENST00000400068 GAS2L3Q86XJ1 694 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms