RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PSDA5PKW4 1024 aaPredicted RBP9.57□□□□□ -0.88
USP16-204ENST00000399976 SERPINB2P05120 415 aa9.57□□□□□ -0.88
USP16-204ENST00000399976 SBF1O95248 1867 aa9.57□□□□□ -0.88
USP16-204ENST00000399976 MYL6BP14649 208 aa9.57□□□□□ -0.88
USP16-204ENST00000399976 BEND3Q5T5X7 828 aa9.57□□□□□ -0.88
USP16-204ENST00000399976 UTP14AQ9BVJ6 771 aaKnown RBP9.57□□□□□ -0.88
USP16-204ENST00000399976 CHMP4BQ9H444 224 aaKnown RBP9.57□□□□□ -0.88
USP16-204ENST00000399976 SNED1Q8TER0 1413 aa9.57□□□□□ -0.88
USP16-204ENST00000399976 H7C1W4 665 aa9.57□□□□□ -0.88
USP16-204ENST00000399976 HLFQ16534 295 aa9.57□□□□□ -0.88
USP16-204ENST00000399976 PRR5LQ6MZQ0 368 aa9.57□□□□□ -0.88
USP16-204ENST00000399976 RIC3Q7Z5B4 369 aa9.57□□□□□ -0.88
USP16-204ENST00000399976 PHAXQ9H814 394 aaKnown RBP9.57□□□□□ -0.88
USP16-204ENST00000399976 CWC25Q9NXE8 425 aaPredicted RBP9.57□□□□□ -0.88
USP16-204ENST00000399976 TBC1D2BQ9UPU7 963 aa9.57□□□□□ -0.88
USP16-204ENST00000399976 NIP7Q9Y221 180 aaKnown RBP eCLIP9.57□□□□□ -0.88
USP16-204ENST00000399976 SH3TC1Q8TE82 1336 aa9.56□□□□□ -0.88
USP16-204ENST00000399976 NEURL1BA8MQ27 555 aa9.56□□□□□ -0.88
USP16-204ENST00000399976 SF3B3Q15393 1217 aaKnown RBP9.56□□□□□ -0.88
USP16-204ENST00000399976 CNBD1Q8NA66 436 aa9.56□□□□□ -0.88
USP16-204ENST00000399976 CASP7P55210 303 aa9.56□□□□□ -0.88
USP16-204ENST00000399976 SMC4Q9NTJ3 1288 aa9.56□□□□□ -0.88
USP16-204ENST00000399976 MAP3K2Q9Y2U5 619 aa9.56□□□□□ -0.88
USP16-204ENST00000399976 SPEF2Q9C093 1822 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 PDE3AQ14432 1141 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 SOGA3Q5TF21 947 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 ATF7IPQ6VMQ6 1270 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.55□□□□□ -0.88
USP16-204ENST00000399976 CRAMP1Q96RY5 1269 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 PDGFDQ9GZP0 370 aaPredicted RBP9.55□□□□□ -0.88
USP16-204ENST00000399976 DUOX1Q9NRD9 1551 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 LTBP3Q9NS15 1303 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 PI4KAP2A4QPH2 592 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 ZBTB7AO95365 584 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 IGKV5-2P06315 115 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 FKBP5Q13451 457 aaPredicted RBP9.55□□□□□ -0.88
USP16-204ENST00000399976 ZKSCAN2Q63HK3 967 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 CC2D2BQ6DHV5 1058 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 PI4KAP1Q8N8J0 262 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 VPS33BQ9H267 617 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 TIAM2Q8IVF5 1701 aa9.55□□□□□ -0.88
USP16-204ENST00000399976 ZNF646O15015 1829 aaPredicted RBP9.55□□□□□ -0.88
USP16-204ENST00000399976 GCKRQ14397 625 aa9.54□□□□□ -0.88
USP16-204ENST00000399976 G2E3Q7L622 706 aa9.54□□□□□ -0.88
USP16-204ENST00000399976 SALL2Q9Y467 1007 aaPredicted RBP9.54□□□□□ -0.88
USP16-204ENST00000399976 NPR1P16066 1061 aa9.54□□□□□ -0.88
USP16-204ENST00000399976 NBPF5PQ86XG9 351 aaPredicted RBP9.54□□□□□ -0.88
USP16-204ENST00000399976 FBXO3Q9UK99 471 aa9.54□□□□□ -0.88
USP16-204ENST00000399976 SLX4Q8IY92 1834 aa9.54□□□□□ -0.88
USP16-204ENST00000399976 ABCC12Q96J65 1359 aa9.54□□□□□ -0.88
USP16-204ENST00000399976 SUSD4Q5VX71 490 aa9.54□□□□□ -0.88
USP16-204ENST00000399976 SRCIN1Q9C0H9 1055 aa9.54□□□□□ -0.88
USP16-204ENST00000399976 ZBTB3Q9H5J0 574 aa9.54□□□□□ -0.88
USP16-204ENST00000399976 RCAN3Q9UKA8 241 aa9.54□□□□□ -0.88
USP16-204ENST00000399976 ZC3H4Q9UPT8 1303 aaKnown RBP9.53□□□□□ -0.88
USP16-204ENST00000399976 ZNF609O15014 1411 aa9.53□□□□□ -0.88
USP16-204ENST00000399976 ELL2O00472 640 aaPredicted RBP9.53□□□□□ -0.88
USP16-204ENST00000399976 MSH5O43196 834 aa9.53□□□□□ -0.88
USP16-204ENST00000399976 MASTLQ96GX5 879 aa9.53□□□□□ -0.88
USP16-204ENST00000399976 PDE8AO60658 829 aa9.53□□□□□ -0.88
USP16-204ENST00000399976 CSF1RP07333 972 aa9.53□□□□□ -0.88
USP16-204ENST00000399976 RABL6Q3YEC7 729 aaPredicted RBP9.53□□□□□ -0.88
USP16-204ENST00000399976 CNKSR1Q969H4 720 aa9.53□□□□□ -0.88
USP16-204ENST00000399976 ALDH1B1P30837 517 aa9.52□□□□□ -0.88
USP16-204ENST00000399976 MTX1Q13505 466 aa9.52□□□□□ -0.88
USP16-204ENST00000399976 SRGNP10124 158 aa9.52□□□□□ -0.89
USP16-204ENST00000399976 MYD88Q99836 296 aa9.52□□□□□ -0.89
USP16-204ENST00000399976 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
USP16-204ENST00000399976 ANXA1P04083 346 aa9.51□□□□□ -0.89
USP16-204ENST00000399976 KCNA3P22001 575 aa9.51□□□□□ -0.89
USP16-204ENST00000399976 SYT17Q9BSW7 474 aa9.51□□□□□ -0.89
USP16-204ENST00000399976 NOB1Q9ULX3 412 aaKnown RBP9.51□□□□□ -0.89
USP16-204ENST00000399976 GRM8O00222 908 aa9.51□□□□□ -0.89
USP16-204ENST00000399976 GNAI3P08754 354 aa9.51□□□□□ -0.89
USP16-204ENST00000399976 PIP4K2AP48426 406 aaPredicted RBP9.51□□□□□ -0.89
USP16-204ENST00000399976 RBM17Q96I25 401 aaKnown RBP9.51□□□□□ -0.89
USP16-204ENST00000399976 H0YIN7 160 aa9.51□□□□□ -0.89
USP16-204ENST00000399976 TRIM27P14373 513 aa9.51□□□□□ -0.89
USP16-204ENST00000399976 AIMP1Q12904 312 aaKnown RBP9.51□□□□□ -0.89
USP16-204ENST00000399976 NLRP3Q96P20 1036 aa9.51□□□□□ -0.89
USP16-204ENST00000399976 PPP1R1BQ9UD71 204 aaPredicted RBP9.51□□□□□ -0.89
USP16-204ENST00000399976 CCDC88AQ3V6T2 1871 aa9.5□□□□□ -0.89
USP16-204ENST00000399976 BBOX1O75936 387 aa9.5□□□□□ -0.89
USP16-204ENST00000399976 NECTIN2Q92692 538 aa9.5□□□□□ -0.89
USP16-204ENST00000399976 FHDC1Q9C0D6 1143 aaPredicted RBP9.5□□□□□ -0.89
USP16-204ENST00000399976 TRMT112Q9UI30 125 aaKnown RBP9.5□□□□□ -0.89
USP16-204ENST00000399976 PIM2Q9P1W9 311 aa9.5□□□□□ -0.89
USP16-204ENST00000399976 GRIN3BO60391 1043 aa9.49□□□□□ -0.89
USP16-204ENST00000399976 ERFEQ4G0M1 354 aa9.49□□□□□ -0.89
USP16-204ENST00000399976 CCDC152Q4G0S7 254 aa9.49□□□□□ -0.89
USP16-204ENST00000399976 MSL1Q68DK7 614 aa9.49□□□□□ -0.89
USP16-204ENST00000399976 DZIP1LQ8IYY4 767 aaKnown RBP9.49□□□□□ -0.89
USP16-204ENST00000399976 CTSWP56202 376 aa9.49□□□□□ -0.89
USP16-204ENST00000399976 C7orf43Q8WVR3 580 aa9.49□□□□□ -0.89
USP16-204ENST00000399976 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
USP16-204ENST00000399976 IRS4O14654 1257 aaPredicted RBP9.48□□□□□ -0.89
USP16-204ENST00000399976 RTFDC1Q9BY42 306 aaPredicted RBP9.48□□□□□ -0.89
USP16-204ENST00000399976 WDR90Q96KV7 1748 aa9.48□□□□□ -0.89
USP16-204ENST00000399976 MYH13Q9UKX3 1938 aa9.48□□□□□ -0.89
USP16-204ENST00000399976 GRAPQ13588 217 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms