RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 STYK1Q6J9G0 422 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 PRPF40BQ6NWY9 871 aaKnown RBP10.87□□□□□ -0.67
USP16-202ENST00000399973 MASTLQ96GX5 879 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 GPBP1L1Q9HC44 474 aaPredicted RBP10.87□□□□□ -0.67
USP16-202ENST00000399973 HYPKQ9NX55 129 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 TAF1P21675 1872 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 FANCIQ9NVI1 1328 aa10.86□□□□□ -0.67
USP16-202ENST00000399973 SPEF2Q9C093 1822 aa10.86□□□□□ -0.67
USP16-202ENST00000399973 TCERG1O14776 1098 aaKnown RBP10.86□□□□□ -0.67
USP16-202ENST00000399973 NPR1P16066 1061 aa10.86□□□□□ -0.67
USP16-202ENST00000399973 PPP1R42Q7Z4L9 355 aa10.86□□□□□ -0.67
USP16-202ENST00000399973 ZNF34Q8IZ26 560 aa10.86□□□□□ -0.67
USP16-202ENST00000399973 RPGRQ92834 1020 aaKnown RBP10.86□□□□□ -0.67
USP16-202ENST00000399973 CNKSR1Q969H4 720 aa10.86□□□□□ -0.67
USP16-202ENST00000399973 RNF39Q9H2S5 420 aa10.86□□□□□ -0.67
USP16-202ENST00000399973 IL16Q14005 1332 aa10.85□□□□□ -0.67
USP16-202ENST00000399973 NFKBIEO00221 500 aa10.85□□□□□ -0.67
USP16-202ENST00000399973 TWISTNBQ3B726 338 aaPredicted RBP10.85□□□□□ -0.67
USP16-202ENST00000399973 CCDC30Q5VVM6 783 aa10.85□□□□□ -0.67
USP16-202ENST00000399973 TSPYL6Q8N831 410 aa10.85□□□□□ -0.67
USP16-202ENST00000399973 PLBD2Q8NHP8 589 aa10.85□□□□□ -0.67
USP16-202ENST00000399973 UTP14AQ9BVJ6 771 aaKnown RBP10.85□□□□□ -0.67
USP16-202ENST00000399973 STK31Q9BXU1 1019 aa10.85□□□□□ -0.67
USP16-202ENST00000399973 PHAXQ9H814 394 aaKnown RBP10.85□□□□□ -0.67
USP16-202ENST00000399973 MYH3P11055 1940 aa10.85□□□□□ -0.67
USP16-202ENST00000399973 ATP5J2-PTCD1G3V325 749 aa10.84□□□□□ -0.67
USP16-202ENST00000399973 LMNB1P20700 586 aa10.84□□□□□ -0.67
USP16-202ENST00000399973 ANKRD13DQ6ZTN6 518 aa10.84□□□□□ -0.67
USP16-202ENST00000399973 RIC3Q7Z5B4 369 aa10.84□□□□□ -0.67
USP16-202ENST00000399973 NLRP10Q86W26 655 aa10.84□□□□□ -0.67
USP16-202ENST00000399973 TRMT112Q9UI30 125 aaKnown RBP10.84□□□□□ -0.67
USP16-202ENST00000399973 RNF123Q5XPI4 1314 aa10.84□□□□□ -0.67
USP16-202ENST00000399973 TCIRG1Q13488 830 aa10.83□□□□□ -0.68
USP16-202ENST00000399973 CCDC93Q567U6 631 aa10.83□□□□□ -0.68
USP16-202ENST00000399973 SOGA3Q5TF21 947 aa10.83□□□□□ -0.68
USP16-202ENST00000399973 C3orf67Q6ZVT6 689 aa10.83□□□□□ -0.68
USP16-202ENST00000399973 TAOK3Q9H2K8 898 aa10.83□□□□□ -0.68
USP16-202ENST00000399973 LRRC37AA6NMS7 1700 aa10.83□□□□□ -0.68
USP16-202ENST00000399973 SH3TC1Q8TE82 1336 aa10.83□□□□□ -0.68
USP16-202ENST00000399973 DDX58O95786 925 aaKnown RBP10.82□□□□□ -0.68
USP16-202ENST00000399973 ALDH1B1P30837 517 aa10.82□□□□□ -0.68
USP16-202ENST00000399973 EXOSC9Q06265 439 aaKnown RBP10.82□□□□□ -0.68
USP16-202ENST00000399973 CRY2Q49AN0 593 aa10.82□□□□□ -0.68
USP16-202ENST00000399973 RTL5Q5HYW3 569 aaPredicted RBP10.82□□□□□ -0.68
USP16-202ENST00000399973 OLFM4Q6UX06 510 aa10.82□□□□□ -0.68
USP16-202ENST00000399973 WDR63Q8IWG1 891 aa10.82□□□□□ -0.68
USP16-202ENST00000399973 NLRP3Q96P20 1036 aa10.82□□□□□ -0.68
USP16-202ENST00000399973 MYD88Q99836 296 aa10.82□□□□□ -0.68
USP16-202ENST00000399973 CHMP4AQ9BY43 222 aa10.82□□□□□ -0.68
USP16-202ENST00000399973 MYH16Q9H6N6 1097 aa10.82□□□□□ -0.68
USP16-202ENST00000399973 KLRG2A4D1S0 409 aaPredicted RBP10.81□□□□□ -0.68
USP16-202ENST00000399973 PPEF1O14829 653 aaPredicted RBP10.81□□□□□ -0.68
USP16-202ENST00000399973 HCLS1P14317 486 aaPredicted RBP10.81□□□□□ -0.68
USP16-202ENST00000399973 PRELPP51888 382 aa10.81□□□□□ -0.68
USP16-202ENST00000399973 SYNE4Q8N205 404 aa10.81□□□□□ -0.68
USP16-202ENST00000399973 RBM17Q96I25 401 aaKnown RBP10.81□□□□□ -0.68
USP16-202ENST00000399973 KDM2BQ8NHM5 1336 aa10.81□□□□□ -0.68
USP16-202ENST00000399973 COL4A1P02462 1669 aa10.8□□□□□ -0.68
USP16-202ENST00000399973 CACNB1Q02641 598 aaPredicted RBP10.8□□□□□ -0.68
USP16-202ENST00000399973 SLC51AQ86UW1 340 aa10.8□□□□□ -0.68
USP16-202ENST00000399973 FAM89AQ96GI7 184 aa10.8□□□□□ -0.68
USP16-202ENST00000399973 ISCA1Q9BUE6 129 aa10.8□□□□□ -0.68
USP16-202ENST00000399973 NMRK2Q9NPI5 230 aa10.8□□□□□ -0.68
USP16-202ENST00000399973 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
USP16-202ENST00000399973 MAP3K2Q9Y2U5 619 aa10.8□□□□□ -0.68
USP16-202ENST00000399973 ABCC4O15439 1325 aa10.8□□□□□ -0.68
USP16-202ENST00000399973 LTBP3Q9NS15 1303 aa10.8□□□□□ -0.68
USP16-202ENST00000399973 WDR90Q96KV7 1748 aa10.79□□□□□ -0.68
USP16-202ENST00000399973 CCER2I3L3R5 266 aa10.79□□□□□ -0.68
USP16-202ENST00000399973 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
USP16-202ENST00000399973 C1QTNF8P60827 252 aa10.79□□□□□ -0.68
USP16-202ENST00000399973 G2E3Q7L622 706 aa10.79□□□□□ -0.68
USP16-202ENST00000399973 ZC3H4Q9UPT8 1303 aaKnown RBP10.79□□□□□ -0.68
USP16-202ENST00000399973 PI4KAP2A4QPH2 592 aa10.78□□□□□ -0.68
USP16-202ENST00000399973 HOXA10P31260 410 aaPredicted RBP10.78□□□□□ -0.68
USP16-202ENST00000399973 FKBP4Q02790 459 aaKnown RBP eCLIP10.78□□□□□ -0.68
USP16-202ENST00000399973 NEXNQ0ZGT2 675 aa10.78□□□□□ -0.68
USP16-202ENST00000399973 FKBP5Q13451 457 aaPredicted RBP10.78□□□□□ -0.68
USP16-202ENST00000399973 DIEXFQ68CQ4 756 aaKnown RBP10.78□□□□□ -0.68
USP16-202ENST00000399973 DDX46Q7L014 1031 aaKnown RBP10.78□□□□□ -0.68
USP16-202ENST00000399973 C16orf71Q8IYS4 520 aaPredicted RBP10.78□□□□□ -0.68
USP16-202ENST00000399973 PI4KAP1Q8N8J0 262 aa10.78□□□□□ -0.68
USP16-202ENST00000399973 CRAMP1Q96RY5 1269 aa10.78□□□□□ -0.68
USP16-202ENST00000399973 TMX4Q9H1E5 349 aaPredicted RBP10.78□□□□□ -0.68
USP16-202ENST00000399973 ZNF277Q9NRM2 450 aaPredicted RBP10.78□□□□□ -0.68
USP16-202ENST00000399973 CWC25Q9NXE8 425 aaPredicted RBP10.78□□□□□ -0.68
USP16-202ENST00000399973 SNED1Q8TER0 1413 aa10.77□□□□□ -0.68
USP16-202ENST00000399973 IRS4O14654 1257 aaPredicted RBP10.77□□□□□ -0.69
USP16-202ENST00000399973 KIF3CO14782 793 aa10.77□□□□□ -0.69
USP16-202ENST00000399973 FLIIQ13045 1269 aa10.77□□□□□ -0.69
USP16-202ENST00000399973 SLC10A5Q5PT55 438 aa10.77□□□□□ -0.69
USP16-202ENST00000399973 KSR2Q6VAB6 950 aa10.77□□□□□ -0.69
USP16-202ENST00000399973 RTKN2Q8IZC4 609 aa10.77□□□□□ -0.69
USP16-202ENST00000399973 C7orf43Q8WVR3 580 aa10.77□□□□□ -0.69
USP16-202ENST00000399973 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
USP16-202ENST00000399973 METTL22Q9BUU2 404 aaPredicted RBP10.77□□□□□ -0.69
USP16-202ENST00000399973 ZNF521Q96K83 1311 aa10.77□□□□□ -0.69
USP16-202ENST00000399973 DUOX1Q9NRD9 1551 aa10.77□□□□□ -0.69
USP16-202ENST00000399973 COL4A5P29400 1685 aa10.76□□□□□ -0.69
USP16-202ENST00000399973 CWF19L2Q2TBE0 894 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms