RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 APBA3O96018 575 aa12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 PRR16Q569H4 304 aa12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 DNAAF4Q8WXU2 420 aa12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 TSG101Q99816 390 aa12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 TNNI2P48788 182 aa12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 BAG1Q99933 345 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 UPF3BQ9BZI7 483 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 MKRN1Q9UHC7 482 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 V9GYY5 206 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-217ENST00000399641 RANBP6O60518 1105 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-217ENST00000399641 IRX5P78411 483 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-217ENST00000399641 BICD1Q96G01 975 aa12.76□□□□□ -0.37
CACNA1C-217ENST00000399641 PRKAG2Q9UGJ0 569 aa12.76□□□□□ -0.37
CACNA1C-217ENST00000399641 SREK1Q8WXA9 508 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-217ENST00000399641 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
CACNA1C-217ENST00000399641 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
CACNA1C-217ENST00000399641 KCNA4P22459 653 aa12.76□□□□□ -0.37
CACNA1C-217ENST00000399641 AKNAQ7Z591 1439 aa12.76□□□□□ -0.37
CACNA1C-217ENST00000399641 CUL4BQ13620 913 aa12.76□□□□□ -0.37
CACNA1C-217ENST00000399641 SNX16P57768 344 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 MAP3K12Q12852 859 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 AMOTQ4VCS5 1084 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 ZRANB2O95218 330 aaKnown RBP eCLIP12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 RASA3Q14644 834 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 AKNAD1Q5T1N1 836 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 ARHGEF6Q15052 776 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 TCERG1LQ5VWI1 586 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 MRRFQ96E11 262 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 CDKL5O76039 1030 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 FKBP15Q5T1M5 1219 aa12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 LRRC59Q96AG4 307 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-217ENST00000399641 PRKCSHP14314 528 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 RIMBP2O15034 1052 aa12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 GSTA5Q7RTV2 222 aa12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 ATICP31939 592 aa12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 GSTO1P78417 241 aa12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 ISM2Q6H9L7 571 aa12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 JMYQ8N9B5 988 aa12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 BAG4O95429 457 aaKnown RBP12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 CCDC82Q8N4S0 544 aa12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 IVNS1ABPQ9Y6Y0 642 aa12.74□□□□□ -0.37
CACNA1C-217ENST00000399641 CCT4P50991 539 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 SPATA32Q96LK8 384 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 SMC6Q96SB8 1091 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 ZBTB3Q9H5J0 574 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 MAP9Q49MG5 647 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 WAPLQ7Z5K2 1190 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 PICALMQ13492 652 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 CEP112Q8N8E3 955 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 CCT6BQ92526 530 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 VAT1LQ9HCJ6 419 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 CDC45O75419 566 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 ZCRB1Q8TBF4 217 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 HGSO14964 777 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 GMNNO75496 209 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 GUCY1B3Q02153 619 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 NAA16Q6N069 864 aaPredicted RBP12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 ZC3H12CQ9C0D7 883 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 PICK1Q9NRD5 415 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 TOP2AP11388 1531 aaKnown RBP12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 IFT140Q96RY7 1462 aa12.73□□□□□ -0.37
CACNA1C-217ENST00000399641 PRKG1Q13976 671 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 EYA3Q99504 573 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 NAPBQ9H115 298 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 BCS1LQ9Y276 419 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 HSPA4P34932 840 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 CFAP157Q5JU67 520 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 RSPH14Q9UHP6 348 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 SLC9A5Q14940 896 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 NLRP5P59047 1200 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 SF3A3Q12874 501 aaKnown RBP eCLIP12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 UAP1Q16222 522 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 TTC31Q49AM3 519 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 SYCP3Q8IZU3 236 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 PANK1Q8TE04 598 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 SFMBT1Q9UHJ3 866 aa12.72□□□□□ -0.37
CACNA1C-217ENST00000399641 WASF1Q92558 559 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 NLRP3Q96P20 1036 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 TMOD4Q9NZQ9 345 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 RABGAP1Q9Y3P9 1069 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 NPHP3Q7Z494 1330 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 MICALL1Q8N3F8 863 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 CXorf38Q8TB03 319 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 ACRBPQ8NEB7 543 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 FERMT1Q9BQL6 677 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 NYXQ9GZU5 481 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 PLEKHH2Q8IVE3 1493 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 KRT13P13646 458 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 ACTN2P35609 894 aa12.71□□□□□ -0.37
CACNA1C-217ENST00000399641 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms