RNA–Protein interactions for RNA: ENST00000399599.7

CDIP1-201, Transcript of cell death inducing p53 target 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDIP1, Length 3,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-201ENST00000399599 ECHDC1Q9NTX5 307 aa16.89■□□□□ 0.29
CDIP1-201ENST00000399599 TBC1D2BQ9UPU7 963 aa16.89■□□□□ 0.29
CDIP1-201ENST00000399599 PCDH11XQ9BZA7 1347 aa16.89■□□□□ 0.29
CDIP1-201ENST00000399599 PCDH11YQ9BZA8 1340 aa16.89■□□□□ 0.29
CDIP1-201ENST00000399599 HSP90AB3PQ58FF7 597 aa16.89■□□□□ 0.29
CDIP1-201ENST00000399599 FSD1Q9BTV5 496 aa16.89■□□□□ 0.29
CDIP1-201ENST00000399599 LMO7Q8WWI1 1683 aa16.89■□□□□ 0.29
CDIP1-201ENST00000399599 SNRKQ9NRH2 765 aa16.88■□□□□ 0.29
CDIP1-201ENST00000399599 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
CDIP1-201ENST00000399599 PTPN12Q05209 780 aaKnown RBP16.87■□□□□ 0.29
CDIP1-201ENST00000399599 NMIQ13287 307 aaPredicted RBP16.87■□□□□ 0.29
CDIP1-201ENST00000399599 KIAA1211Q6ZU35 1233 aa16.87■□□□□ 0.29
CDIP1-201ENST00000399599 USP54Q70EL1 1684 aa16.87■□□□□ 0.29
CDIP1-201ENST00000399599 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
CDIP1-201ENST00000399599 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
CDIP1-201ENST00000399599 HLFQ16534 295 aa16.87■□□□□ 0.29
CDIP1-201ENST00000399599 DBNLQ9UJU6 430 aaKnown RBP16.87■□□□□ 0.29
CDIP1-201ENST00000399599 DDIT3P35638 169 aa16.86■□□□□ 0.29
CDIP1-201ENST00000399599 C5P01031 1676 aa16.86■□□□□ 0.29
CDIP1-201ENST00000399599 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
CDIP1-201ENST00000399599 CARD10Q9BWT7 1032 aa16.86■□□□□ 0.29
CDIP1-201ENST00000399599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.86■□□□□ 0.29
CDIP1-201ENST00000399599 SGSM2O43147 1006 aa16.86■□□□□ 0.29
CDIP1-201ENST00000399599 GLRX3O76003 335 aaKnown RBP16.86■□□□□ 0.29
CDIP1-201ENST00000399599 CASTP20810 708 aaKnown RBP16.86■□□□□ 0.29
CDIP1-201ENST00000399599 RAB3GAP1Q15042 981 aa16.86■□□□□ 0.29
CDIP1-201ENST00000399599 ZNF589Q86UQ0 364 aaPredicted RBP16.86■□□□□ 0.29
CDIP1-201ENST00000399599 KIF1AQ12756 1690 aa16.85■□□□□ 0.29
CDIP1-201ENST00000399599 SNAP23O00161 211 aa16.85■□□□□ 0.29
CDIP1-201ENST00000399599 LARGE1O95461 756 aa16.85■□□□□ 0.29
CDIP1-201ENST00000399599 SLC4A9Q96Q91 983 aa16.85■□□□□ 0.29
CDIP1-201ENST00000399599 SNX14Q9Y5W7 946 aa16.85■□□□□ 0.29
CDIP1-201ENST00000399599 PHRF1Q9P1Y6 1649 aaKnown RBP16.85■□□□□ 0.29
CDIP1-201ENST00000399599 XIRP1Q702N8 1843 aaKnown RBP16.84■□□□□ 0.29
CDIP1-201ENST00000399599 MCCP23508 829 aa16.84■□□□□ 0.29
CDIP1-201ENST00000399599 STRCQ7RTU9 1775 aa16.84■□□□□ 0.29
CDIP1-201ENST00000399599 HSP90AB4PQ58FF6 505 aa16.84■□□□□ 0.29
CDIP1-201ENST00000399599 NECAB1Q8N987 351 aa16.84■□□□□ 0.29
CDIP1-201ENST00000399599 PLBD2Q8NHP8 589 aa16.84■□□□□ 0.29
CDIP1-201ENST00000399599 RBM27Q9P2N5 1060 aaKnown RBP16.84■□□□□ 0.29
CDIP1-201ENST00000399599 PRPF40AO75400 957 aaKnown RBP16.83■□□□□ 0.29
CDIP1-201ENST00000399599 JAKMIP1Q96N16 626 aaKnown RBP16.83■□□□□ 0.29
CDIP1-201ENST00000399599 LRRC2Q9BYS8 371 aa16.83■□□□□ 0.29
CDIP1-201ENST00000399599 LSG1Q9H089 658 aaKnown RBP16.83■□□□□ 0.29
CDIP1-201ENST00000399599 ATG3Q9NT62 314 aa16.83■□□□□ 0.29
CDIP1-201ENST00000399599 ZDHHC9Q9Y397 364 aa16.83■□□□□ 0.29
CDIP1-201ENST00000399599 OVOS2A0A0G2JMS6 1433 aa16.83■□□□□ 0.28
CDIP1-201ENST00000399599 COL18A1P39060 1754 aa16.83■□□□□ 0.28
CDIP1-201ENST00000399599 A0A0G2JLW4 131 aa16.83■□□□□ 0.28
CDIP1-201ENST00000399599 STK3Q13188 491 aa16.83■□□□□ 0.28
CDIP1-201ENST00000399599 BAG4O95429 457 aaKnown RBP16.83■□□□□ 0.28
CDIP1-201ENST00000399599 PI16Q6UXB8 463 aa16.83■□□□□ 0.28
CDIP1-201ENST00000399599 ZBTB1Q9Y2K1 713 aa16.83■□□□□ 0.28
CDIP1-201ENST00000399599 MTX1Q13505 466 aa16.82■□□□□ 0.28
CDIP1-201ENST00000399599 PXDNLA1KZ92 1463 aa16.82■□□□□ 0.28
CDIP1-201ENST00000399599 CPDO75976 1380 aa16.82■□□□□ 0.28
CDIP1-201ENST00000399599 CHMP4AQ9BY43 222 aa16.82■□□□□ 0.28
CDIP1-201ENST00000399599 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
CDIP1-201ENST00000399599 DCCP43146 1447 aa16.82■□□□□ 0.28
CDIP1-201ENST00000399599 RFX5P48382 616 aaPredicted RBP16.81■□□□□ 0.28
CDIP1-201ENST00000399599 FOSBP53539 338 aa16.81■□□□□ 0.28
CDIP1-201ENST00000399599 AK2P54819 239 aa16.81■□□□□ 0.28
CDIP1-201ENST00000399599 TNNI3KQ59H18 835 aa16.81■□□□□ 0.28
CDIP1-201ENST00000399599 HELBQ8NG08 1087 aaPredicted RBP16.81■□□□□ 0.28
CDIP1-201ENST00000399599 NSFL1CQ9UNZ2 370 aaKnown RBP16.81■□□□□ 0.28
CDIP1-201ENST00000399599 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
CDIP1-201ENST00000399599 FPGT-TNNI3KV9GXZ4 949 aa16.81■□□□□ 0.28
CDIP1-201ENST00000399599 GOLIM4O00461 696 aa16.81■□□□□ 0.28
CDIP1-201ENST00000399599 FOXO4P98177 505 aa16.8■□□□□ 0.28
CDIP1-201ENST00000399599 GAS2L3Q86XJ1 694 aa16.8■□□□□ 0.28
CDIP1-201ENST00000399599 GPATCH3Q96I76 525 aa16.8■□□□□ 0.28
CDIP1-201ENST00000399599 KCNQ2O43526 872 aa16.8■□□□□ 0.28
CDIP1-201ENST00000399599 FKBP4Q02790 459 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDIP1-201ENST00000399599 UTRNP46939 3433 aa16.8■□□□□ 0.28
CDIP1-201ENST00000399599 EXOC5O00471 708 aa16.8■□□□□ 0.28
CDIP1-201ENST00000399599 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
CDIP1-201ENST00000399599 CCDC83Q8IWF9 413 aa16.8■□□□□ 0.28
CDIP1-201ENST00000399599 GBP4Q96PP9 640 aa16.8■□□□□ 0.28
CDIP1-201ENST00000399599 CACNA1FO60840 1977 aa16.79■□□□□ 0.28
CDIP1-201ENST00000399599 HSPA4P34932 840 aa16.79■□□□□ 0.28
CDIP1-201ENST00000399599 CCDC24Q8N4L8 307 aa16.79■□□□□ 0.28
CDIP1-201ENST00000399599 RBM8AQ9Y5S9 174 aaKnown RBP16.79■□□□□ 0.28
CDIP1-201ENST00000399599 ERVV-2B6SEH9 535 aa16.79■□□□□ 0.28
CDIP1-201ENST00000399599 ADORA1P30542 326 aa16.79■□□□□ 0.28
CDIP1-201ENST00000399599 CAVIN1Q6NZI2 390 aaKnown RBP16.79■□□□□ 0.28
CDIP1-201ENST00000399599 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
CDIP1-201ENST00000399599 TAF7LQ5H9L4 462 aa16.78■□□□□ 0.28
CDIP1-201ENST00000399599 ERC1Q8IUD2 1116 aa16.78■□□□□ 0.28
CDIP1-201ENST00000399599 CASP7P55210 303 aa16.78■□□□□ 0.28
CDIP1-201ENST00000399599 CHST3Q7LGC8 479 aa16.78■□□□□ 0.28
CDIP1-201ENST00000399599 VPS53Q5VIR6 699 aa16.78■□□□□ 0.28
CDIP1-201ENST00000399599 NAP1L2Q9ULW6 460 aaPredicted RBP16.78■□□□□ 0.28
CDIP1-201ENST00000399599 RAD50Q92878 1312 aa16.77■□□□□ 0.28
CDIP1-201ENST00000399599 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.28
CDIP1-201ENST00000399599 XRCC6P12956 609 aaKnown RBP eCLIP16.77■□□□□ 0.27
CDIP1-201ENST00000399599 RUFY3Q7L099 469 aa16.77■□□□□ 0.27
CDIP1-201ENST00000399599 EVI5LQ96CN4 794 aa16.77■□□□□ 0.27
CDIP1-201ENST00000399599 HCLS1P14317 486 aaPredicted RBP16.76■□□□□ 0.27
CDIP1-201ENST00000399599 UTYO14607 1347 aa16.76■□□□□ 0.27
CDIP1-201ENST00000399599 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms