RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 GGA1Q9UJY5 639 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 ASXL1Q8IXJ9 1541 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 SAMD9Q5K651 1589 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 ARHGAP27Q6ZUM4 889 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 KRT23Q9C075 422 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 ACBD3Q9H3P7 528 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 NKTRP30414 1462 aaKnown RBP9.26□□□□□ -0.93
USP47-203ENST00000399455 CKAP2LQ8IYA6 745 aa9.26□□□□□ -0.93
USP47-203ENST00000399455 NSFL1CQ9UNZ2 370 aaKnown RBP9.26□□□□□ -0.93
USP47-203ENST00000399455 IL16Q14005 1332 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 ZFYP08048 801 aaPredicted RBP9.25□□□□□ -0.93
USP47-203ENST00000399455 GNAT2P19087 354 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 ME1P48163 572 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 DPP8Q6V1X1 898 aaPredicted RBP9.25□□□□□ -0.93
USP47-203ENST00000399455 ERMNQ8TAM6 284 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 XAGE3Q8WTP9 111 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 UGGT1Q9NYU2 1555 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 CYP7A1P22680 504 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 LDHBP07195 334 aaKnown RBP9.25□□□□□ -0.93
USP47-203ENST00000399455 OTUD7BQ6GQQ9 843 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 ZRSR2Q15696 482 aaKnown RBP9.25□□□□□ -0.93
USP47-203ENST00000399455 TMEM2Q9UHN6 1383 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 GOLGA8AA7E2F4 631 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 GOLGA8BA8MQT2 603 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 IRS4O14654 1257 aaPredicted RBP9.25□□□□□ -0.93
USP47-203ENST00000399455 CBFA2T2O43439 604 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 WWC3Q9ULE0 1092 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 IVNS1ABPQ9Y6Y0 642 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 HOXC9P31274 260 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 CALML4Q96GE6 196 aa9.25□□□□□ -0.93
USP47-203ENST00000399455 PYM1Q9BRP8 204 aaKnown RBP9.25□□□□□ -0.93
USP47-203ENST00000399455 DNMT1P26358 1616 aaKnown RBP9.25□□□□□ -0.93
USP47-203ENST00000399455 SOS1Q07889 1333 aaPredicted RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 COL17A1Q9UMD9 1497 aaPredicted RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 ZCCHC11Q5TAX3 1644 aaKnown RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 MAGEB6P1A0A0J9YX57 407 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 BRPF1P55201 1214 aaPredicted RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 ATP2B3Q16720 1220 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 CNNM2Q9H8M5 875 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 HECW2Q9P2P5 1572 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 UFL1O94874 794 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 PPFIBP1Q86W92 1011 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 CCDC97Q96F63 343 aaPredicted RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 BCS1LQ9Y276 419 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 TNPO1Q92973 898 aaKnown RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 THUMPD2Q9BTF0 503 aaKnown RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 ALDH1L1O75891 902 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 CEBPZQ03701 1054 aaKnown RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 WDR33Q9C0J8 1336 aaKnown RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 GNAQP50148 359 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 AMPD3Q01432 767 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 CETN1Q12798 172 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 NFATC2IPQ8NCF5 419 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 NOD1Q9Y239 953 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 ZNF397Q8NF99 534 aaPredicted RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 GPHNQ9NQX3 736 aaPredicted RBP9.24□□□□□ -0.93
USP47-203ENST00000399455 CHPF2Q9P2E5 772 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 DENND2AQ9ULE3 1009 aa9.24□□□□□ -0.93
USP47-203ENST00000399455 EFCAB6Q5THR3 1501 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 PLXNC1O60486 1568 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 IL15P40933 162 aaPredicted RBP9.23□□□□□ -0.93
USP47-203ENST00000399455 SETQ01105 290 aaPredicted RBP9.23□□□□□ -0.93
USP47-203ENST00000399455 ARHGEF10LQ9HCE6 1279 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 NLRP1Q9C000 1473 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 RNMTO43148 476 aaKnown RBP9.23□□□□□ -0.93
USP47-203ENST00000399455 LIG1P18858 919 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 DCPSQ96C86 337 aaKnown RBP9.23□□□□□ -0.93
USP47-203ENST00000399455 BICD1Q96G01 975 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 CCDC8Q9H0W5 538 aaPredicted RBP9.23□□□□□ -0.93
USP47-203ENST00000399455 GOLIM4O00461 696 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 JAKMIP3Q5VZ66 844 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 TCOF1Q13428 1488 aaKnown RBP9.23□□□□□ -0.93
USP47-203ENST00000399455 KRT85P78386 507 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 KRT27Q7Z3Y8 459 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 ZNF592Q92610 1267 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 CASTP20810 708 aaKnown RBP9.23□□□□□ -0.93
USP47-203ENST00000399455 TMEM67Q5HYA8 995 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 COPS6Q7L5N1 327 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 TMEM57Q8N5G2 664 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 SMARCC2Q8TAQ2 1214 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 KAT6BQ8WYB5 2073 aa9.23□□□□□ -0.93
USP47-203ENST00000399455 CCDC148Q8NFR7 591 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 FANCIQ9NVI1 1328 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 SBNO1A3KN83 1393 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 MBD3O95983 291 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 KSR2Q6VAB6 950 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 USP37Q86T82 979 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 UBA5Q9GZZ9 404 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 SLC4A4Q9Y6R1 1079 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 EDC4Q6P2E9 1401 aaKnown RBP9.22□□□□□ -0.93
USP47-203ENST00000399455 SLC39A6Q13433 755 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 TMTC2Q8N394 836 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 EXOC6BQ9Y2D4 811 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 RBM19Q9Y4C8 960 aaKnown RBP9.22□□□□□ -0.93
USP47-203ENST00000399455 PI4KAP2A4QPH2 592 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 PI4KAP1Q8N8J0 262 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 LRRC45Q96CN5 670 aa9.22□□□□□ -0.93
USP47-203ENST00000399455 AS3MTQ9HBK9 375 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms