RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PXDNLA1KZ92 1463 aa22.48■■□□□ 1.19
CTNS-203ENST00000399306 GTF2E1P29083 439 aaPredicted RBP22.48■■□□□ 1.19
CTNS-203ENST00000399306 HSP90B1P14625 803 aaKnown RBP22.47■■□□□ 1.19
CTNS-203ENST00000399306 CWC25Q9NXE8 425 aaPredicted RBP22.47■■□□□ 1.19
CTNS-203ENST00000399306 SH3TC1Q8TE82 1336 aa22.47■■□□□ 1.19
CTNS-203ENST00000399306 DLEC1Q9Y238 1755 aa22.47■■□□□ 1.19
CTNS-203ENST00000399306 ATP5J2-PTCD1G3V325 749 aa22.46■■□□□ 1.19
CTNS-203ENST00000399306 IGKV5-2P06315 115 aa22.46■■□□□ 1.19
CTNS-203ENST00000399306 KLHL34Q8N239 644 aa22.46■■□□□ 1.19
CTNS-203ENST00000399306 ZBTB38Q8NAP3 1195 aaPredicted RBP22.46■■□□□ 1.19
CTNS-203ENST00000399306 TRMT112Q9UI30 125 aaKnown RBP22.46■■□□□ 1.19
CTNS-203ENST00000399306 BRCA1P38398 1863 aaKnown RBP22.45■■□□□ 1.19
CTNS-203ENST00000399306 NEURL1BA8MQ27 555 aa22.45■■□□□ 1.18
CTNS-203ENST00000399306 IPO8O15397 1037 aaKnown RBP22.45■■□□□ 1.18
CTNS-203ENST00000399306 NLGN2Q8NFZ4 835 aa22.45■■□□□ 1.18
CTNS-203ENST00000399306 BCL2L13Q9BXK5 485 aa22.45■■□□□ 1.18
CTNS-203ENST00000399306 API5Q9BZZ5 524 aaKnown RBP22.45■■□□□ 1.18
CTNS-203ENST00000399306 ALDH1L1O75891 902 aa22.44■■□□□ 1.18
CTNS-203ENST00000399306 PCCAP05165 728 aaPredicted RBP22.44■■□□□ 1.18
CTNS-203ENST00000399306 BEND3Q5T5X7 828 aa22.44■■□□□ 1.18
CTNS-203ENST00000399306 N4BP2Q86UW6 1770 aaPredicted RBP22.43■■□□□ 1.18
CTNS-203ENST00000399306 ABCC12Q96J65 1359 aa22.43■■□□□ 1.18
CTNS-203ENST00000399306 H0YIN7 160 aa22.43■■□□□ 1.18
CTNS-203ENST00000399306 CRY2Q49AN0 593 aa22.43■■□□□ 1.18
CTNS-203ENST00000399306 ERFEQ4G0M1 354 aa22.43■■□□□ 1.18
CTNS-203ENST00000399306 LAMB2P55268 1798 aa22.43■■□□□ 1.18
CTNS-203ENST00000399306 CDHR2Q9BYE9 1310 aa22.42■■□□□ 1.18
CTNS-203ENST00000399306 FAM177BA6PVY3 158 aa22.42■■□□□ 1.18
CTNS-203ENST00000399306 F6X3S4 739 aa22.42■■□□□ 1.18
CTNS-203ENST00000399306 KCNA3P22001 575 aa22.42■■□□□ 1.18
CTNS-203ENST00000399306 NUTM1Q86Y26 1132 aa22.42■■□□□ 1.18
CTNS-203ENST00000399306 NOB1Q9ULX3 412 aaKnown RBP22.42■■□□□ 1.18
CTNS-203ENST00000399306 SRGNP10124 158 aa22.41■■□□□ 1.18
CTNS-203ENST00000399306 DPEP1P16444 411 aa22.41■■□□□ 1.18
CTNS-203ENST00000399306 GCKRQ14397 625 aa22.41■■□□□ 1.18
CTNS-203ENST00000399306 STYK1Q6J9G0 422 aa22.41■■□□□ 1.18
CTNS-203ENST00000399306 C2CD5Q86YS7 1000 aa22.41■■□□□ 1.18
CTNS-203ENST00000399306 NLRP3Q96P20 1036 aa22.41■■□□□ 1.18
CTNS-203ENST00000399306 SRCIN1Q9C0H9 1055 aa22.41■■□□□ 1.18
CTNS-203ENST00000399306 MASTLQ96GX5 879 aa22.4■■□□□ 1.18
CTNS-203ENST00000399306 PIM2Q9P1W9 311 aa22.4■■□□□ 1.18
CTNS-203ENST00000399306 A0A0G2JLW4 131 aa22.39■■□□□ 1.17
CTNS-203ENST00000399306 H7C1W4 665 aa22.39■■□□□ 1.17
CTNS-203ENST00000399306 BCAR3O75815 825 aa22.39■■□□□ 1.17
CTNS-203ENST00000399306 NPR1P16066 1061 aa22.39■■□□□ 1.17
CTNS-203ENST00000399306 CWF19L2Q2TBE0 894 aaKnown RBP22.39■■□□□ 1.17
CTNS-203ENST00000399306 FAM89AQ96GI7 184 aa22.39■■□□□ 1.17
CTNS-203ENST00000399306 YTHDC1Q96MU7 727 aaKnown RBP22.39■■□□□ 1.17
CTNS-203ENST00000399306 COL11A2P13942 1736 aaPredicted RBP22.39■■□□□ 1.17
CTNS-203ENST00000399306 DDX60Q8IY21 1712 aaKnown RBP22.39■■□□□ 1.17
CTNS-203ENST00000399306 HOXA10P31260 410 aaPredicted RBP22.38■■□□□ 1.17
CTNS-203ENST00000399306 CCT4P50991 539 aaKnown RBP22.38■■□□□ 1.17
CTNS-203ENST00000399306 CNKSR1Q969H4 720 aa22.38■■□□□ 1.17
CTNS-203ENST00000399306 TNRC6CQ9HCJ0 1690 aaKnown RBP22.38■■□□□ 1.17
CTNS-203ENST00000399306 ARFGEF1Q9Y6D6 1849 aa22.38■■□□□ 1.17
CTNS-203ENST00000399306 DCAF8L1A6NGE4 600 aa22.37■■□□□ 1.17
CTNS-203ENST00000399306 IRS4O14654 1257 aaPredicted RBP22.37■■□□□ 1.17
CTNS-203ENST00000399306 SLC4A10Q6U841 1118 aa22.37■■□□□ 1.17
CTNS-203ENST00000399306 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
CTNS-203ENST00000399306 CCDC24Q8N4L8 307 aa22.37■■□□□ 1.17
CTNS-203ENST00000399306 RCAN3Q9UKA8 241 aa22.37■■□□□ 1.17
CTNS-203ENST00000399306 CHRNA5P30532 468 aa22.36■■□□□ 1.17
CTNS-203ENST00000399306 SF3B3Q15393 1217 aaKnown RBP22.36■■□□□ 1.17
CTNS-203ENST00000399306 ZKSCAN2Q63HK3 967 aa22.36■■□□□ 1.17
CTNS-203ENST00000399306 PLA2G12BQ9BX93 195 aa22.36■■□□□ 1.17
CTNS-203ENST00000399306 UTYO14607 1347 aa22.35■■□□□ 1.17
CTNS-203ENST00000399306 ABCC4O15439 1325 aa22.35■■□□□ 1.17
CTNS-203ENST00000399306 PDE8AO60658 829 aa22.35■■□□□ 1.17
CTNS-203ENST00000399306 ALDH1B1P30837 517 aa22.35■■□□□ 1.17
CTNS-203ENST00000399306 DALRD3Q5D0E6 543 aaKnown RBP22.35■■□□□ 1.17
CTNS-203ENST00000399306 TTLL6Q8N841 843 aa22.35■■□□□ 1.17
CTNS-203ENST00000399306 MYH3P11055 1940 aa22.35■■□□□ 1.17
CTNS-203ENST00000399306 GRM8O00222 908 aa22.34■■□□□ 1.17
CTNS-203ENST00000399306 GRIN3BO60391 1043 aa22.34■■□□□ 1.17
CTNS-203ENST00000399306 HCLS1P14317 486 aaPredicted RBP22.34■■□□□ 1.17
CTNS-203ENST00000399306 CASP7P55210 303 aa22.34■■□□□ 1.17
CTNS-203ENST00000399306 SYNE4Q8N205 404 aa22.34■■□□□ 1.17
CTNS-203ENST00000399306 CRAMP1Q96RY5 1269 aa22.34■■□□□ 1.17
CTNS-203ENST00000399306 TRIM27P14373 513 aa22.33■■□□□ 1.17
CTNS-203ENST00000399306 INTS3Q68E01 1043 aaKnown RBP22.33■■□□□ 1.17
CTNS-203ENST00000399306 RPGRQ92834 1020 aaKnown RBP22.33■■□□□ 1.17
CTNS-203ENST00000399306 RBM17Q96I25 401 aaKnown RBP22.33■■□□□ 1.17
CTNS-203ENST00000399306 MS4A1P11836 297 aa22.32■■□□□ 1.16
CTNS-203ENST00000399306 UBE3BQ7Z3V4 1068 aa22.32■■□□□ 1.16
CTNS-203ENST00000399306 FRAT1Q92837 279 aaPredicted RBP22.32■■□□□ 1.16
CTNS-203ENST00000399306 ZNF622Q969S3 477 aaKnown RBP eCLIP22.32■■□□□ 1.16
CTNS-203ENST00000399306 RTL9Q8NET4 1388 aa22.31■■□□□ 1.16
CTNS-203ENST00000399306 GPR162Q16538 588 aa22.31■■□□□ 1.16
CTNS-203ENST00000399306 C9orf78Q9NZ63 289 aaPredicted RBP22.31■■□□□ 1.16
CTNS-203ENST00000399306 SOGA3Q5TF21 947 aa22.3■■□□□ 1.16
CTNS-203ENST00000399306 C3orf67Q6ZVT6 689 aa22.3■■□□□ 1.16
CTNS-203ENST00000399306 HDAC5Q9UQL6 1122 aa22.3■■□□□ 1.16
CTNS-203ENST00000399306 CCDC152Q4G0S7 254 aa22.29■■□□□ 1.16
CTNS-203ENST00000399306 RTL5Q5HYW3 569 aaPredicted RBP22.29■■□□□ 1.16
CTNS-203ENST00000399306 DDX46Q7L014 1031 aaKnown RBP22.29■■□□□ 1.16
CTNS-203ENST00000399306 BCS1LQ9Y276 419 aa22.29■■□□□ 1.16
CTNS-203ENST00000399306 YBX3P16989 372 aaKnown RBP eCLIP22.28■■□□□ 1.16
CTNS-203ENST00000399306 CTSWP56202 376 aa22.28■■□□□ 1.16
CTNS-203ENST00000399306 TMC4Q7Z404 712 aa22.28■■□□□ 1.16
CTNS-203ENST00000399306 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms