RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 KDM2BQ8NHM5 1336 aa19.28■□□□□ 0.68
SMIM11A-203ENST00000399299 ZNF219Q9P2Y4 722 aaPredicted RBP19.28■□□□□ 0.68
SMIM11A-203ENST00000399299 TCIRG1Q13488 830 aa19.27■□□□□ 0.68
SMIM11A-203ENST00000399299 CCDC93Q567U6 631 aa19.27■□□□□ 0.68
SMIM11A-203ENST00000399299 WWC1Q8IX03 1113 aa19.27■□□□□ 0.68
SMIM11A-203ENST00000399299 PLBD2Q8NHP8 589 aa19.27■□□□□ 0.68
SMIM11A-203ENST00000399299 UTP14AQ9BVJ6 771 aaKnown RBP19.27■□□□□ 0.68
SMIM11A-203ENST00000399299 CHMP4AQ9BY43 222 aa19.27■□□□□ 0.68
SMIM11A-203ENST00000399299 TAOK3Q9H2K8 898 aa19.27■□□□□ 0.68
SMIM11A-203ENST00000399299 IL16Q14005 1332 aa19.26■□□□□ 0.67
SMIM11A-203ENST00000399299 HOXA10P31260 410 aaPredicted RBP19.26■□□□□ 0.67
SMIM11A-203ENST00000399299 NLRP10Q86W26 655 aa19.26■□□□□ 0.67
SMIM11A-203ENST00000399299 LAMB2P55268 1798 aa19.25■□□□□ 0.67
SMIM11A-203ENST00000399299 SLC10A5Q5PT55 438 aa19.25■□□□□ 0.67
SMIM11A-203ENST00000399299 ANKRD13DQ6ZTN6 518 aa19.25■□□□□ 0.67
SMIM11A-203ENST00000399299 NMRK2Q9NPI5 230 aa19.25■□□□□ 0.67
SMIM11A-203ENST00000399299 C8orf58Q8NAV2 365 aa19.24■□□□□ 0.67
SMIM11A-203ENST00000399299 RPGRQ92834 1020 aaKnown RBP19.24■□□□□ 0.67
SMIM11A-203ENST00000399299 NLRP3Q96P20 1036 aa19.23■□□□□ 0.67
SMIM11A-203ENST00000399299 CRAMP1Q96RY5 1269 aa19.23■□□□□ 0.67
SMIM11A-203ENST00000399299 SNED1Q8TER0 1413 aa19.23■□□□□ 0.67
SMIM11A-203ENST00000399299 SENP3-EIF4A1A0A087X0R7 540 aa19.22■□□□□ 0.67
SMIM11A-203ENST00000399299 GLTPD2A6NH11 291 aa19.22■□□□□ 0.67
SMIM11A-203ENST00000399299 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
SMIM11A-203ENST00000399299 TOMM70O94826 608 aa19.22■□□□□ 0.67
SMIM11A-203ENST00000399299 CCDC30Q5VVM6 783 aa19.22■□□□□ 0.67
SMIM11A-203ENST00000399299 CC2D2BQ6DHV5 1058 aa19.22■□□□□ 0.67
SMIM11A-203ENST00000399299 RTKN2Q8IZC4 609 aa19.22■□□□□ 0.67
SMIM11A-203ENST00000399299 ISCA1Q9BUE6 129 aa19.22■□□□□ 0.67
SMIM11A-203ENST00000399299 FKBP4Q02790 459 aaKnown RBP eCLIP19.21■□□□□ 0.67
SMIM11A-203ENST00000399299 DDX60Q8IY21 1712 aaKnown RBP19.21■□□□□ 0.67
SMIM11A-203ENST00000399299 TSR2Q969E8 191 aaKnown RBP19.21■□□□□ 0.67
SMIM11A-203ENST00000399299 RBM17Q96I25 401 aaKnown RBP19.21■□□□□ 0.67
SMIM11A-203ENST00000399299 TRMT112Q9UI30 125 aaKnown RBP19.21■□□□□ 0.67
SMIM11A-203ENST00000399299 SH3TC1Q8TE82 1336 aa19.21■□□□□ 0.67
SMIM11A-203ENST00000399299 WDR90Q96KV7 1748 aa19.2■□□□□ 0.66
SMIM11A-203ENST00000399299 TRIM28Q13263 835 aaKnown RBP19.2■□□□□ 0.66
SMIM11A-203ENST00000399299 C3orf67Q6ZVT6 689 aa19.2■□□□□ 0.66
SMIM11A-203ENST00000399299 WDR63Q8IWG1 891 aa19.2■□□□□ 0.66
SMIM11A-203ENST00000399299 TSPYL6Q8N831 410 aa19.2■□□□□ 0.66
SMIM11A-203ENST00000399299 GOLGA2Q08379 1002 aa19.19■□□□□ 0.66
SMIM11A-203ENST00000399299 GRIPAP1Q4V328 841 aa19.19■□□□□ 0.66
SMIM11A-203ENST00000399299 OLFM4Q6UX06 510 aa19.19■□□□□ 0.66
SMIM11A-203ENST00000399299 PHAXQ9H814 394 aaKnown RBP19.19■□□□□ 0.66
SMIM11A-203ENST00000399299 CEP350Q5VT06 3117 aa19.19■□□□□ 0.66
SMIM11A-203ENST00000399299 DPY19L2Q6NUT2 758 aa19.18■□□□□ 0.66
SMIM11A-203ENST00000399299 RIC3Q7Z5B4 369 aa19.18■□□□□ 0.66
SMIM11A-203ENST00000399299 RBM46Q8TBY0 533 aaKnown RBP19.18■□□□□ 0.66
SMIM11A-203ENST00000399299 PSMD1Q99460 953 aa19.18■□□□□ 0.66
SMIM11A-203ENST00000399299 RRAGCQ9HB90 399 aa19.18■□□□□ 0.66
SMIM11A-203ENST00000399299 CACNA1FO60840 1977 aa19.17■□□□□ 0.66
SMIM11A-203ENST00000399299 HCLS1P14317 486 aaPredicted RBP19.17■□□□□ 0.66
SMIM11A-203ENST00000399299 C16orf71Q8IYS4 520 aaPredicted RBP19.17■□□□□ 0.66
SMIM11A-203ENST00000399299 ATP5J2-PTCD1G3V325 749 aa19.16■□□□□ 0.66
SMIM11A-203ENST00000399299 PPEF1O14829 653 aaPredicted RBP19.16■□□□□ 0.66
SMIM11A-203ENST00000399299 HSPA6P17066 643 aa19.16■□□□□ 0.66
SMIM11A-203ENST00000399299 TWISTNBQ3B726 338 aaPredicted RBP19.16■□□□□ 0.66
SMIM11A-203ENST00000399299 FAM9BQ8IZU0 186 aa19.16■□□□□ 0.66
SMIM11A-203ENST00000399299 SYNE4Q8N205 404 aa19.16■□□□□ 0.66
SMIM11A-203ENST00000399299 FANCIQ9NVI1 1328 aa19.16■□□□□ 0.66
SMIM11A-203ENST00000399299 DDX58O95786 925 aaKnown RBP19.15■□□□□ 0.66
SMIM11A-203ENST00000399299 VEGFAP15692 232 aaPredicted RBP19.15■□□□□ 0.66
SMIM11A-203ENST00000399299 STK31Q9BXU1 1019 aa19.15■□□□□ 0.66
SMIM11A-203ENST00000399299 ZNF277Q9NRM2 450 aaPredicted RBP19.15■□□□□ 0.66
SMIM11A-203ENST00000399299 ABCC4O15439 1325 aa19.15■□□□□ 0.66
SMIM11A-203ENST00000399299 IARSP41252 1262 aaKnown RBP19.14■□□□□ 0.65
SMIM11A-203ENST00000399299 FSTL1Q12841 308 aa19.13■□□□□ 0.65
SMIM11A-203ENST00000399299 FAM89AQ96GI7 184 aa19.13■□□□□ 0.65
SMIM11A-203ENST00000399299 SALL2Q9Y467 1007 aaPredicted RBP19.13■□□□□ 0.65
SMIM11A-203ENST00000399299 ATP6V0A2Q9Y487 856 aa19.13■□□□□ 0.65
SMIM11A-203ENST00000399299 LRRC37AA6NMS7 1700 aa19.13■□□□□ 0.65
SMIM11A-203ENST00000399299 SCN4AP35499 1836 aa19.12■□□□□ 0.65
SMIM11A-203ENST00000399299 BBOX1O75936 387 aa19.12■□□□□ 0.65
SMIM11A-203ENST00000399299 SF3B3Q15393 1217 aaKnown RBP19.12■□□□□ 0.65
SMIM11A-203ENST00000399299 DDX46Q7L014 1031 aaKnown RBP19.12■□□□□ 0.65
SMIM11A-203ENST00000399299 CCDC191Q8NCU4 936 aa19.12■□□□□ 0.65
SMIM11A-203ENST00000399299 MYD88Q99836 296 aa19.12■□□□□ 0.65
SMIM11A-203ENST00000399299 METTL22Q9BUU2 404 aaPredicted RBP19.12■□□□□ 0.65
SMIM11A-203ENST00000399299 TMX4Q9H1E5 349 aaPredicted RBP19.12■□□□□ 0.65
SMIM11A-203ENST00000399299 TAF1P21675 1872 aa19.11■□□□□ 0.65
SMIM11A-203ENST00000399299 POTECB2RU33 542 aa19.11■□□□□ 0.65
SMIM11A-203ENST00000399299 HSP90B1P14625 803 aaKnown RBP19.11■□□□□ 0.65
SMIM11A-203ENST00000399299 GRAPQ13588 217 aa19.11■□□□□ 0.65
SMIM11A-203ENST00000399299 TMC4Q7Z404 712 aa19.11■□□□□ 0.65
SMIM11A-203ENST00000399299 ZBTB38Q8NAP3 1195 aaPredicted RBP19.11■□□□□ 0.65
SMIM11A-203ENST00000399299 GRAPLQ8TC17 118 aaPredicted RBP19.11■□□□□ 0.65
SMIM11A-203ENST00000399299 KSR2Q6VAB6 950 aa19.1■□□□□ 0.65
SMIM11A-203ENST00000399299 SP8Q8IXZ3 490 aa19.1■□□□□ 0.65
SMIM11A-203ENST00000399299 L3MBTL3Q96JM7 780 aaPredicted RBP19.1■□□□□ 0.65
SMIM11A-203ENST00000399299 COL4A5P29400 1685 aa19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 PI4KAP2A4QPH2 592 aa19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 FZD9O00144 591 aa19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 IRS4O14654 1257 aaPredicted RBP19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 DDNO94850 711 aaPredicted RBP19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 PCCAP05165 728 aaPredicted RBP19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 PI4KAP1Q8N8J0 262 aa19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 SMC1BQ8NDV3 1235 aa19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 JDP2Q8WYK2 163 aa19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 ZNF428Q96B54 188 aa19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 VPS33BQ9H267 617 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms