RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 SEPT10Q9P0V9 454 aa5.75□□□□□ -1.49
TTC3-204ENST00000399017 LAMC3Q9Y6N6 1575 aa5.75□□□□□ -1.49
TTC3-204ENST00000399017 NOP56O00567 594 aaKnown RBP5.75□□□□□ -1.49
TTC3-204ENST00000399017 ATP2A1O14983 1001 aa5.75□□□□□ -1.49
TTC3-204ENST00000399017 ZEB2O60315 1214 aa5.75□□□□□ -1.49
TTC3-204ENST00000399017 SPA17Q15506 151 aa5.75□□□□□ -1.49
TTC3-204ENST00000399017 C22orf23Q9BZE7 217 aa5.75□□□□□ -1.49
TTC3-204ENST00000399017 GOLGA6CA6NDK9 693 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 GOLGA6BA6NDN3 693 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 PFDN6O15212 129 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 NBPF7P0C2Y1 421 aaPredicted RBP5.74□□□□□ -1.49
TTC3-204ENST00000399017 GOLGA6DP0CG33 693 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 DDB1Q16531 1140 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 C6orf163Q5TEZ5 329 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 CRNKL1Q9BZJ0 848 aaKnown RBP5.74□□□□□ -1.49
TTC3-204ENST00000399017 GOLGA6AQ9NYA3 693 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 NUCB1Q02818 461 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 MVPQ14764 893 aaKnown RBP5.74□□□□□ -1.49
TTC3-204ENST00000399017 NFKBIBQ15653 356 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 RSPH3Q86UC2 560 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 MAST3O60307 1309 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 CHD4Q14839 1912 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 MINDY4BA8MYZ0 360 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 RBM25P49756 843 aaKnown RBP5.74□□□□□ -1.49
TTC3-204ENST00000399017 GNAQP50148 359 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 TMTC2Q8N394 836 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 OPTNQ96CV9 577 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 MAP10Q9P2G4 905 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 AKNAQ7Z591 1439 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 WDR7Q9Y4E6 1490 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 WDR63Q8IWG1 891 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 GTF3C6Q969F1 213 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 LMCD1Q9NZU5 365 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 TCHHQ07283 1943 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 MYO15BQ96JP2 1530 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 ARHGEF37A1IGU5 675 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 MAP9Q49MG5 647 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 ABI1Q8IZP0 508 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 EDEM3Q9BZQ6 932 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 RPRD2Q5VT52 1461 aaKnown RBP5.74□□□□□ -1.49
TTC3-204ENST00000399017 NASPP49321 788 aaPredicted RBP5.74□□□□□ -1.49
TTC3-204ENST00000399017 JAKMIP2Q96AA8 810 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 ARHGEF10LQ9HCE6 1279 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 CC2D2AQ9P2K1 1620 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 USO1O60763 962 aaKnown RBP5.74□□□□□ -1.49
TTC3-204ENST00000399017 USP8P40818 1118 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 PPP1R14CQ8TAE6 165 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 MTIF3Q9H2K0 278 aaKnown RBP5.74□□□□□ -1.49
TTC3-204ENST00000399017 ZNF408Q9H9D4 720 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 MBIPQ9NS73 344 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 CCDC87Q9NVE4 849 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 FAM8A1Q9UBU6 413 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 PNMA2Q9UL42 364 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 CYP46A1Q9Y6A2 500 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 ATAD2Q6PL18 1390 aa5.74□□□□□ -1.49
TTC3-204ENST00000399017 MRC2Q9UBG0 1479 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 RPGRIP1LQ68CZ1 1315 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 HOXD10P28358 340 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 IFT57Q9NWB7 429 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 HYPKQ9NX55 129 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 TRMT112Q9UI30 125 aaKnown RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 CEP128Q6ZU80 1094 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 CCDC148Q8NFR7 591 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 GCNAQ96QF7 691 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 GOLGA8CPA6NN73 597 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 DNM2P50570 870 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 ODR4Q5SWX8 454 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 SRGAP1Q7Z6B7 1085 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 PRPF38AQ8NAV1 312 aaKnown RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 ATP5J2-PTCD1G3V325 749 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 SATB1Q01826 763 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 KANK3Q6NY19 840 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 TTLL7Q6ZT98 887 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 CCT6BQ92526 530 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 IQCGQ9H095 443 aaKnown RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 RNF34Q969K3 372 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 RAB3IPQ96QF0 476 aaPredicted RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 KAT14Q9H8E8 782 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 PUF60Q9UHX1 559 aaKnown RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 CCDC61Q9Y6R9 512 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 CCT6AP40227 531 aaKnown RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 DNAAF4Q8WXU2 420 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 FANCAO15360 1455 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 CCDC194A0A1B0GVG4 234 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 ZNF213O14771 459 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 ATP2A2P16615 1042 aaKnown RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 TTLL5Q6EMB2 1281 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 MAK16Q9BXY0 300 aaKnown RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 AS3MTQ9HBK9 375 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 SRGAP3O43295 1099 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 MAP4K4O95819 1239 aaPredicted RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 MTERF4Q7Z6M4 381 aaKnown RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 GLT8D2Q9H1C3 349 aa5.73□□□□□ -1.49
TTC3-204ENST00000399017 BAZ2BQ9UIF8 2168 aaKnown RBP5.73□□□□□ -1.49
TTC3-204ENST00000399017 PTPRCP08575 1304 aa5.72□□□□□ -1.49
TTC3-204ENST00000399017 TSPY3P0CV98 308 aa5.72□□□□□ -1.49
TTC3-204ENST00000399017 TSPY8P0CW00 308 aa5.72□□□□□ -1.49
TTC3-204ENST00000399017 CCDC6Q16204 474 aa5.72□□□□□ -1.49
TTC3-204ENST00000399017 RUFY4Q6ZNE9 571 aa5.72□□□□□ -1.49
TTC3-204ENST00000399017 SULF1Q8IWU6 871 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms